RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 PHF20Q9BVI0 1012 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 PPP2R2CQ9Y2T4 447 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 URI1O94763 535 aaPredicted RBP17.4■□□□□ 0.38
TGFB1-201ENST00000221930 RCAN1P53805 252 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 TROAPQ12815 778 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 TBX2Q13207 712 aaPredicted RBP17.4■□□□□ 0.38
TGFB1-201ENST00000221930 CAVIN4Q5BKX8 364 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 TOGARAM2Q6ZUX3 1019 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 FAM84BQ96KN1 310 aaPredicted RBP17.4■□□□□ 0.38
TGFB1-201ENST00000221930 ARHGAP6O43182 974 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 CCP110O43303 1012 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 MYO1BO43795 1136 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 IQCA1Q86XH1 822 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 CELF1Q92879 486 aaKnown RBP17.39■□□□□ 0.37
TGFB1-201ENST00000221930 ZNF446Q9NWS9 450 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 DACH1Q9UI36 760 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 MINPP1Q9UNW1 487 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 VWA3AA6NCI4 1184 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 COBLO75128 1261 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 FAM47AQ5JRC9 791 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 CTR9Q6PD62 1173 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 SPATA20Q8TB22 786 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 JAG2Q9Y219 1238 aa17.39■□□□□ 0.37
TGFB1-201ENST00000221930 MORC2Q9Y6X9 1032 aaPredicted RBP17.39■□□□□ 0.37
TGFB1-201ENST00000221930 CD44P16070 742 aaKnown RBP17.38■□□□□ 0.37
TGFB1-201ENST00000221930 KANK3Q6NY19 840 aa17.38■□□□□ 0.37
TGFB1-201ENST00000221930 DESI2Q9BSY9 194 aa17.38■□□□□ 0.37
TGFB1-201ENST00000221930 MYH6P13533 1939 aa17.38■□□□□ 0.37
TGFB1-201ENST00000221930 TEX33O43247 280 aa17.38■□□□□ 0.37
TGFB1-201ENST00000221930 ONECUT3O60422 494 aaPredicted RBP17.38■□□□□ 0.37
TGFB1-201ENST00000221930 VEGFAP15692 232 aaPredicted RBP17.38■□□□□ 0.37
TGFB1-201ENST00000221930 PLCD1P51178 756 aa17.38■□□□□ 0.37
TGFB1-201ENST00000221930 ARHGAP29Q52LW3 1261 aa17.38■□□□□ 0.37
TGFB1-201ENST00000221930 SLC10A5Q5PT55 438 aa17.38■□□□□ 0.37
TGFB1-201ENST00000221930 AATFQ9NY61 560 aaKnown RBP eCLIP17.38■□□□□ 0.37
TGFB1-201ENST00000221930 PHLPP2Q6ZVD8 1323 aa17.38■□□□□ 0.37
TGFB1-201ENST00000221930 PRPF3O43395 683 aaKnown RBP17.37■□□□□ 0.37
TGFB1-201ENST00000221930 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
TGFB1-201ENST00000221930 UBE4AQ14139 1066 aa17.37■□□□□ 0.37
TGFB1-201ENST00000221930 CREBRFQ8IUR6 639 aa17.37■□□□□ 0.37
TGFB1-201ENST00000221930 CCDC24Q8N4L8 307 aa17.37■□□□□ 0.37
TGFB1-201ENST00000221930 TRIML1Q8N9V2 468 aa17.37■□□□□ 0.37
TGFB1-201ENST00000221930 PAGE5Q96GU1 130 aa17.37■□□□□ 0.37
TGFB1-201ENST00000221930 WDR24Q96S15 920 aa17.37■□□□□ 0.37
TGFB1-201ENST00000221930 ZSCAN12O43309 604 aa17.37■□□□□ 0.37
TGFB1-201ENST00000221930 SF3B3Q15393 1217 aaKnown RBP17.37■□□□□ 0.37
TGFB1-201ENST00000221930 NPY5RQ15761 445 aa17.37■□□□□ 0.37
TGFB1-201ENST00000221930 FAM98CQ17RN3 349 aaKnown RBP17.37■□□□□ 0.37
TGFB1-201ENST00000221930 BSDC1Q9NW68 430 aaPredicted RBP17.37■□□□□ 0.37
TGFB1-201ENST00000221930 TFCP2L1Q9NZI6 479 aa17.37■□□□□ 0.37
TGFB1-201ENST00000221930 MTF1Q14872 753 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 NR1I3Q14994 352 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 PPP2R5BQ15173 497 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 TMED8Q6PL24 325 aaPredicted RBP17.36■□□□□ 0.37
TGFB1-201ENST00000221930 SRBD1Q8N5C6 995 aaKnown RBP17.36■□□□□ 0.37
TGFB1-201ENST00000221930 CPLX3Q8WVH0 158 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 BRIP1Q9BX63 1249 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 FEZ2Q9UHY8 353 aaPredicted RBP17.36■□□□□ 0.37
TGFB1-201ENST00000221930 ADAMTS3O15072 1205 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 TUBB4AP04350 444 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 GNG11P61952 73 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 PTGDRQ13258 359 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 CARD6Q9BX69 1037 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 PARP3Q9Y6F1 533 aa17.36■□□□□ 0.37
TGFB1-201ENST00000221930 STX10O60499 249 aa17.35■□□□□ 0.37
TGFB1-201ENST00000221930 CYP2D6P10635 497 aa17.35■□□□□ 0.37
TGFB1-201ENST00000221930 MECOMQ03112 1051 aa17.35■□□□□ 0.37
TGFB1-201ENST00000221930 C8orf37Q96NL8 207 aa17.35■□□□□ 0.37
TGFB1-201ENST00000221930 USP21Q9UK80 565 aa17.35■□□□□ 0.37
TGFB1-201ENST00000221930 CACNA1SQ13698 1873 aa17.35■□□□□ 0.37
TGFB1-201ENST00000221930 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
TGFB1-201ENST00000221930 TMTC3Q6ZXV5 915 aa17.35■□□□□ 0.37
TGFB1-201ENST00000221930 MNS1Q8NEH6 495 aa17.35■□□□□ 0.37
TGFB1-201ENST00000221930 NSUN4Q96CB9 384 aaKnown RBP17.35■□□□□ 0.37
TGFB1-201ENST00000221930 EPC1Q9H2F5 836 aa17.35■□□□□ 0.37
TGFB1-201ENST00000221930 BLZF1Q9H2G9 400 aa17.35■□□□□ 0.37
TGFB1-201ENST00000221930 H2AFXP16104 143 aaPredicted RBP17.34■□□□□ 0.37
TGFB1-201ENST00000221930 ERCC5P28715 1186 aaPredicted RBP17.34■□□□□ 0.37
TGFB1-201ENST00000221930 PRDX5P30044 214 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 CLCN6P51797 869 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 TTC38Q5R3I4 469 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 PIK3AP1Q6ZUJ8 805 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 KRT222Q8N1A0 295 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 LINC00116Q8NCU8 138 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 UBXN4Q92575 508 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 ST7Q9NRC1 585 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 A0A1B0GTH6 734 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 KARSQ15046 597 aaKnown RBP17.34■□□□□ 0.37
TGFB1-201ENST00000221930 FCHSD1Q86WN1 690 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 TNFRSF25Q93038 417 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 IRX2Q9BZI1 471 aaPredicted RBP17.34■□□□□ 0.37
TGFB1-201ENST00000221930 BRMS1Q9HCU9 246 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 DUOX1Q9NRD9 1551 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 RBM28Q9NW13 759 aaKnown RBP17.34■□□□□ 0.37
TGFB1-201ENST00000221930 NARFQ9UHQ1 456 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 SYNRGQ9UMZ2 1314 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 APTXQ7Z2E3 356 aaKnown RBP17.34■□□□□ 0.37
TGFB1-201ENST00000221930 HOMEZQ8IX15 550 aa17.34■□□□□ 0.37
TGFB1-201ENST00000221930 DCP1AQ9NPI6 582 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms