RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 CTCFLQ8NI51 663 aaPredicted RBP25.36■■□□□ 1.65
CCDC9-201ENST00000221922 GTPBP4Q9BZE4 634 aaKnown RBP25.36■■□□□ 1.65
CCDC9-201ENST00000221922 CD209Q9NNX6 404 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 PCDHB6Q9Y5E3 794 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 NAV1Q8NEY1 1877 aa25.36■■□□□ 1.65
CCDC9-201ENST00000221922 ROBO3Q96MS0 1386 aa25.35■■□□□ 1.65
CCDC9-201ENST00000221922 SLU7O95391 586 aaKnown RBP25.35■■□□□ 1.65
CCDC9-201ENST00000221922 BAG3O95817 575 aa25.35■■□□□ 1.65
CCDC9-201ENST00000221922 EVX2Q03828 476 aa25.35■■□□□ 1.65
CCDC9-201ENST00000221922 TMC4Q7Z404 712 aa25.35■■□□□ 1.65
CCDC9-201ENST00000221922 PROM2Q8N271 834 aa25.35■■□□□ 1.65
CCDC9-201ENST00000221922 OXER1Q8TDS5 423 aa25.35■■□□□ 1.65
CCDC9-201ENST00000221922 GPR101Q96P66 508 aaPredicted RBP25.35■■□□□ 1.65
CCDC9-201ENST00000221922 CABP5Q9NP86 173 aa25.35■■□□□ 1.65
CCDC9-201ENST00000221922 MCM9Q9NXL9 1143 aa25.35■■□□□ 1.65
CCDC9-201ENST00000221922 DDX41Q9UJV9 622 aaKnown RBP25.35■■□□□ 1.65
CCDC9-201ENST00000221922 BMP15O95972 392 aa25.35■■□□□ 1.65
CCDC9-201ENST00000221922 UBASH3AP57075 661 aa25.35■■□□□ 1.65
CCDC9-201ENST00000221922 FOXP4Q8IVH2 680 aaPredicted RBP25.35■■□□□ 1.65
CCDC9-201ENST00000221922 VPS54Q9P1Q0 977 aa25.35■■□□□ 1.65
CCDC9-201ENST00000221922 TRIM75PA6NK02 468 aa25.34■■□□□ 1.65
CCDC9-201ENST00000221922 PLEKHA8P1O95397 391 aa25.34■■□□□ 1.65
CCDC9-201ENST00000221922 MDM2Q00987 491 aaPredicted RBP25.34■■□□□ 1.65
CCDC9-201ENST00000221922 C12orf60Q5U649 245 aa25.34■■□□□ 1.65
CCDC9-201ENST00000221922 ZNF397Q8NF99 534 aaPredicted RBP25.34■■□□□ 1.65
CCDC9-201ENST00000221922 V9GY48 417 aaPredicted RBP25.34■■□□□ 1.65
CCDC9-201ENST00000221922 TMX1Q9H3N1 280 aa25.33■■□□□ 1.65
CCDC9-201ENST00000221922 PCDHA5Q9Y5H7 936 aa25.33■■□□□ 1.65
CCDC9-201ENST00000221922 NRXN2Q9P2S2 1712 aa25.33■■□□□ 1.65
CCDC9-201ENST00000221922 ANKRD31Q8N7Z5 1873 aa25.33■■□□□ 1.65
CCDC9-201ENST00000221922 USP5P45974 858 aa25.33■■□□□ 1.65
CCDC9-201ENST00000221922 GRIK5Q16478 980 aa25.33■■□□□ 1.65
CCDC9-201ENST00000221922 KANK3Q6NY19 840 aa25.33■■□□□ 1.65
CCDC9-201ENST00000221922 SH3RF3Q8TEJ3 882 aaPredicted RBP25.33■■□□□ 1.65
CCDC9-201ENST00000221922 DPF2Q92785 391 aa25.33■■□□□ 1.65
CCDC9-201ENST00000221922 CNTNAP5Q8WYK1 1306 aa25.32■■□□□ 1.64
CCDC9-201ENST00000221922 EP400Q96L91 3159 aa25.32■■□□□ 1.64
CCDC9-201ENST00000221922 CCP110O43303 1012 aa25.32■■□□□ 1.64
CCDC9-201ENST00000221922 USP17L8P0C7I0 530 aa25.32■■□□□ 1.64
CCDC9-201ENST00000221922 DIXDC1Q155Q3 683 aa25.32■■□□□ 1.64
CCDC9-201ENST00000221922 CCDC93Q567U6 631 aa25.32■■□□□ 1.64
CCDC9-201ENST00000221922 VSTM4Q8IW00 320 aa25.32■■□□□ 1.64
CCDC9-201ENST00000221922 CDK5RAP2Q96SN8 1893 aa25.32■■□□□ 1.64
CCDC9-201ENST00000221922 SERPINC1P01008 464 aa25.32■■□□□ 1.64
CCDC9-201ENST00000221922 TSPY2A6NKD2 308 aa25.31■■□□□ 1.64
CCDC9-201ENST00000221922 POSTNQ15063 836 aa25.31■■□□□ 1.64
CCDC9-201ENST00000221922 FAM47AQ5JRC9 791 aa25.31■■□□□ 1.64
CCDC9-201ENST00000221922 TBC1D16Q8TBP0 767 aa25.31■■□□□ 1.64
CCDC9-201ENST00000221922 FBXO41Q8TF61 875 aa25.31■■□□□ 1.64
CCDC9-201ENST00000221922 SHISA4Q96DD7 197 aa25.31■■□□□ 1.64
CCDC9-201ENST00000221922 CCDC34Q96HJ3 373 aa25.31■■□□□ 1.64
CCDC9-201ENST00000221922 RTFDC1Q9BY42 306 aaPredicted RBP25.31■■□□□ 1.64
CCDC9-201ENST00000221922 BMP6P22004 513 aa25.3■■□□□ 1.64
CCDC9-201ENST00000221922 SPECC1Q5M775 1068 aa25.3■■□□□ 1.64
CCDC9-201ENST00000221922 POLR2DO15514 142 aaKnown RBP25.3■■□□□ 1.64
CCDC9-201ENST00000221922 ATP2B1P20020 1258 aa25.3■■□□□ 1.64
CCDC9-201ENST00000221922 KIF5BP33176 963 aa25.3■■□□□ 1.64
CCDC9-201ENST00000221922 KMT5BQ4FZB7 885 aa25.3■■□□□ 1.64
CCDC9-201ENST00000221922 NT5DC1Q5TFE4 455 aa25.3■■□□□ 1.64
CCDC9-201ENST00000221922 SYT10Q6XYQ8 523 aa25.3■■□□□ 1.64
CCDC9-201ENST00000221922 AMOTL1Q8IY63 956 aa25.3■■□□□ 1.64
CCDC9-201ENST00000221922 FANCLQ9NW38 375 aa25.3■■□□□ 1.64
CCDC9-201ENST00000221922 POLLQ9UGP5 575 aa25.3■■□□□ 1.64
CCDC9-201ENST00000221922 DDX60LQ5H9U9 1706 aaKnown RBP25.3■■□□□ 1.64
CCDC9-201ENST00000221922 NMT2O60551 498 aa25.29■■□□□ 1.64
CCDC9-201ENST00000221922 GRIN1Q05586 938 aa25.29■■□□□ 1.64
CCDC9-201ENST00000221922 CFAP100Q494V2 611 aa25.29■■□□□ 1.64
CCDC9-201ENST00000221922 DACH1Q9UI36 760 aa25.29■■□□□ 1.64
CCDC9-201ENST00000221922 CCDC178Q5BJE1 867 aa25.28■■□□□ 1.64
CCDC9-201ENST00000221922 SP8Q8IXZ3 490 aa25.28■■□□□ 1.64
CCDC9-201ENST00000221922 SRBD1Q8N5C6 995 aaKnown RBP25.28■■□□□ 1.64
CCDC9-201ENST00000221922 TRIML1Q8N9V2 468 aa25.28■■□□□ 1.64
CCDC9-201ENST00000221922 TBC1D22AQ8WUA7 517 aa25.28■■□□□ 1.64
CCDC9-201ENST00000221922 FERMT2Q96AC1 680 aa25.28■■□□□ 1.64
CCDC9-201ENST00000221922 PLSCR1O15162 318 aa25.28■■□□□ 1.64
CCDC9-201ENST00000221922 RCSD1Q6JBY9 416 aa25.28■■□□□ 1.64
CCDC9-201ENST00000221922 ANKS1AQ92625 1134 aa25.28■■□□□ 1.64
CCDC9-201ENST00000221922 SERTAD1Q9UHV2 236 aa25.28■■□□□ 1.64
CCDC9-201ENST00000221922 GPR75-ASB3A0A0A6YYF3 556 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 FOXN1O15353 648 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 ETF1P62495 437 aaKnown RBP25.27■■□□□ 1.64
CCDC9-201ENST00000221922 ELF2Q15723 593 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 FCHSD1Q86WN1 690 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 DGKHQ86XP1 1220 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 NLGN1Q8N2Q7 840 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 SMARCE1Q969G3 411 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 CSRNP2Q9H175 543 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.27■■□□□ 1.64
CCDC9-201ENST00000221922 V9GYY5 206 aaPredicted RBP25.27■■□□□ 1.64
CCDC9-201ENST00000221922 hCG_1642624A0A1W2PR95 340 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 PPEF1O14829 653 aaPredicted RBP25.27■■□□□ 1.64
CCDC9-201ENST00000221922 SCG2P13521 617 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 SARSP49591 514 aaKnown RBP25.27■■□□□ 1.64
CCDC9-201ENST00000221922 TNFRSF25Q93038 417 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 FAM163AQ96GL9 167 aaPredicted RBP25.27■■□□□ 1.64
CCDC9-201ENST00000221922 KAT14Q9H8E8 782 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 MAN1B1Q9UKM7 699 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 FAM205AQ6ZU69 1335 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 PHLPP2Q6ZVD8 1323 aa25.27■■□□□ 1.64
CCDC9-201ENST00000221922 TOP1P11387 765 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms