RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 APOBRQ0VD83 1088 aa31.93■■■□□ 2.7
CHMP4B-201ENST00000217402 DGKZQ13574 1117 aa31.93■■■□□ 2.7
CHMP4B-201ENST00000217402 PAXIP1Q6ZW49 1069 aaPredicted RBP31.93■■■□□ 2.7
CHMP4B-201ENST00000217402 RASAL3Q86YV0 1011 aa31.93■■■□□ 2.7
CHMP4B-201ENST00000217402 PNMA1Q8ND90 353 aa31.93■■■□□ 2.7
CHMP4B-201ENST00000217402 AGXT2Q9BYV1 514 aa31.93■■■□□ 2.7
CHMP4B-201ENST00000217402 TMTC2Q8N394 836 aa31.93■■■□□ 2.7
CHMP4B-201ENST00000217402 NAP1L2Q9ULW6 460 aaPredicted RBP31.93■■■□□ 2.7
CHMP4B-201ENST00000217402 ST18O60284 1047 aa31.92■■■□□ 2.7
CHMP4B-201ENST00000217402 BACE1P56817 501 aa31.92■■■□□ 2.7
CHMP4B-201ENST00000217402 SGMS1Q86VZ5 419 aa31.92■■■□□ 2.7
CHMP4B-201ENST00000217402 FBXL16Q8N461 479 aa31.92■■■□□ 2.7
CHMP4B-201ENST00000217402 KIAA1683Q9H0B3 1180 aa31.92■■■□□ 2.7
CHMP4B-201ENST00000217402 BRPF3Q9ULD4 1205 aa31.92■■■□□ 2.7
CHMP4B-201ENST00000217402 SPRYD7Q5W111 196 aa31.91■■■□□ 2.7
CHMP4B-201ENST00000217402 RASGRP2Q7LDG7 609 aa31.91■■■□□ 2.7
CHMP4B-201ENST00000217402 RAB11FIP4Q86YS3 637 aa31.91■■■□□ 2.7
CHMP4B-201ENST00000217402 MYL10Q9BUA6 226 aa31.91■■■□□ 2.7
CHMP4B-201ENST00000217402 ALDH8A1Q9H2A2 487 aaPredicted RBP31.91■■■□□ 2.7
CHMP4B-201ENST00000217402 KLF18A0A0U1RQI7 1052 aa31.9■■■□□ 2.7
CHMP4B-201ENST00000217402 HMGCS2P54868 508 aa31.9■■■□□ 2.7
CHMP4B-201ENST00000217402 GRM1Q13255 1194 aa31.9■■■□□ 2.7
CHMP4B-201ENST00000217402 SPICE1Q8N0Z3 855 aa31.9■■■□□ 2.7
CHMP4B-201ENST00000217402 GOPCQ9HD26 462 aa31.9■■■□□ 2.7
CHMP4B-201ENST00000217402 SLC12A7Q9Y666 1083 aa31.9■■■□□ 2.7
CHMP4B-201ENST00000217402 ANKRD1Q15327 319 aa31.89■■■□□ 2.7
CHMP4B-201ENST00000217402 CATIPQ7Z7H3 387 aa31.89■■■□□ 2.7
CHMP4B-201ENST00000217402 ZNF654Q8IZM8 581 aa31.89■■■□□ 2.7
CHMP4B-201ENST00000217402 HHIPL1Q96JK4 782 aa31.89■■■□□ 2.7
CHMP4B-201ENST00000217402 VCPKMTQ9H867 229 aa31.89■■■□□ 2.7
CHMP4B-201ENST00000217402 KCNH4Q9UQ05 1017 aa31.89■■■□□ 2.7
CHMP4B-201ENST00000217402 F5H6K3 240 aa31.89■■■□□ 2.7
CHMP4B-201ENST00000217402 HTRA3P83110 453 aa31.89■■■□□ 2.7
CHMP4B-201ENST00000217402 KLRC3Q07444 240 aa31.89■■■□□ 2.7
CHMP4B-201ENST00000217402 KIAA1755Q5JYT7 1200 aa31.89■■■□□ 2.7
CHMP4B-201ENST00000217402 SYNPO2Q9UMS6 1093 aa31.89■■■□□ 2.7
CHMP4B-201ENST00000217402 CD2BP2O95400 341 aaKnown RBP31.88■■■□□ 2.69
CHMP4B-201ENST00000217402 NDUFB10O96000 172 aa31.88■■■□□ 2.69
CHMP4B-201ENST00000217402 SLC10A3P09131 477 aa31.88■■■□□ 2.69
CHMP4B-201ENST00000217402 ZBTB48P10074 688 aaPredicted RBP31.88■■■□□ 2.69
CHMP4B-201ENST00000217402 RXRAP19793 462 aa31.88■■■□□ 2.69
CHMP4B-201ENST00000217402 USP14P54578 494 aa31.88■■■□□ 2.69
CHMP4B-201ENST00000217402 APOA5Q6Q788 366 aa31.88■■■□□ 2.69
CHMP4B-201ENST00000217402 GMCL1P1Q8NEA9 526 aa31.88■■■□□ 2.69
CHMP4B-201ENST00000217402 NUP133Q8WUM0 1156 aa31.88■■■□□ 2.69
CHMP4B-201ENST00000217402 CXCL11O14625 94 aa31.87■■■□□ 2.69
CHMP4B-201ENST00000217402 SLFN13Q68D06 897 aa31.87■■■□□ 2.69
CHMP4B-201ENST00000217402 CYP4F22Q6NT55 531 aa31.87■■■□□ 2.69
CHMP4B-201ENST00000217402 USP17L2Q6R6M4 530 aa31.87■■■□□ 2.69
CHMP4B-201ENST00000217402 MICU3Q86XE3 530 aa31.87■■■□□ 2.69
CHMP4B-201ENST00000217402 EMILIN3Q9NT22 766 aa31.87■■■□□ 2.69
CHMP4B-201ENST00000217402 GOLGA8BA8MQT2 603 aa31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 C19orf81C9J6K1 198 aa31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 C1QTNF8P60827 252 aa31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 SNAPC2Q13487 334 aa31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 SYNE3Q6ZMZ3 975 aa31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 TMOD4Q9NZQ9 345 aa31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 TPCN1Q9ULQ1 816 aa31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 A0A0G2JLL6 359 aaPredicted RBP31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 RASSF10A6NK89 507 aa31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 DEFB115Q30KQ5 88 aa31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 PRRT2Q7Z6L0 340 aaPredicted RBP31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 CCDC144CPQ8IYA2 1237 aa31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 CCDC102AQ96A19 550 aa31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 NUP88Q99567 741 aaPredicted RBP31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 ISY1Q9ULR0 285 aaKnown RBP31.86■■■□□ 2.69
CHMP4B-201ENST00000217402 FAM155AB1AL88 458 aaPredicted RBP31.85■■■□□ 2.69
CHMP4B-201ENST00000217402 DDAH1O94760 285 aa31.85■■■□□ 2.69
CHMP4B-201ENST00000217402 TROAPQ12815 778 aa31.85■■■□□ 2.69
CHMP4B-201ENST00000217402 GADL1Q6ZQY3 521 aa31.85■■■□□ 2.69
CHMP4B-201ENST00000217402 PTPRFP10586 1907 aa31.84■■■□□ 2.69
CHMP4B-201ENST00000217402 ZBTB43O43298 467 aa31.84■■■□□ 2.69
CHMP4B-201ENST00000217402 PDHBP11177 359 aa31.84■■■□□ 2.69
CHMP4B-201ENST00000217402 SH3D19Q5HYK7 790 aa31.84■■■□□ 2.69
CHMP4B-201ENST00000217402 VCAM1P19320 739 aa31.83■■■□□ 2.69
CHMP4B-201ENST00000217402 GTF2A2P52657 109 aa31.83■■■□□ 2.69
CHMP4B-201ENST00000217402 EVCP57679 992 aa31.83■■■□□ 2.69
CHMP4B-201ENST00000217402 CCDC96Q2M329 555 aa31.83■■■□□ 2.69
CHMP4B-201ENST00000217402 SLC1A4P43007 532 aa31.82■■■□□ 2.69
CHMP4B-201ENST00000217402 STK3Q13188 491 aa31.82■■■□□ 2.69
CHMP4B-201ENST00000217402 IL27Q8NEV9 243 aa31.82■■■□□ 2.69
CHMP4B-201ENST00000217402 LPAR1Q92633 364 aa31.82■■■□□ 2.69
CHMP4B-201ENST00000217402 C12orf42Q96LP6 360 aa31.82■■■□□ 2.69
CHMP4B-201ENST00000217402 FRMPD2Q68DX3 1309 aaPredicted RBP31.82■■■□□ 2.68
CHMP4B-201ENST00000217402 PDIA3P30101 505 aaKnown RBP31.82■■■□□ 2.68
CHMP4B-201ENST00000217402 FAM83BQ5T0W9 1011 aa31.82■■■□□ 2.68
CHMP4B-201ENST00000217402 GMCL1Q96IK5 515 aa31.82■■■□□ 2.68
CHMP4B-201ENST00000217402 MS4A4AQ96JQ5 239 aa31.82■■■□□ 2.68
CHMP4B-201ENST00000217402 LIMCH1Q9UPQ0 1083 aa31.82■■■□□ 2.68
CHMP4B-201ENST00000217402 CCL15-CCL14A0A0B4J2E2 113 aa31.81■■■□□ 2.68
CHMP4B-201ENST00000217402 GOLGA8AA7E2F4 631 aa31.81■■■□□ 2.68
CHMP4B-201ENST00000217402 LARGE1O95461 756 aa31.81■■■□□ 2.68
CHMP4B-201ENST00000217402 GOLGA8HP0CJ92 632 aa31.81■■■□□ 2.68
CHMP4B-201ENST00000217402 CETPP11597 493 aa31.81■■■□□ 2.68
CHMP4B-201ENST00000217402 CCL15Q16663 113 aa31.81■■■□□ 2.68
CHMP4B-201ENST00000217402 KCTD1Q719H9 257 aa31.81■■■□□ 2.68
CHMP4B-201ENST00000217402 DCAF4Q8WV16 495 aa31.81■■■□□ 2.68
CHMP4B-201ENST00000217402 CAPNS2Q96L46 248 aa31.81■■■□□ 2.68
CHMP4B-201ENST00000217402 HPS5Q9UPZ3 1129 aa31.81■■■□□ 2.68
CHMP4B-201ENST00000217402 CALM1P0DP23 149 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms