RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 RTKN2Q8IZC4 609 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 PNKPQ96T60 521 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 LAMB2P55268 1798 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 MAP9Q49MG5 647 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 CNPY4Q8N129 248 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 STK11IPQ8N1F8 1099 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 CCDC148Q8NFR7 591 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
CHERP-201ENST00000198939 ANKIB1Q9P2G1 1089 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 LEMD3Q9Y2U8 911 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 PRR29P0C7W0 189 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 CCDC129Q6ZRS4 1044 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 JMYQ8N9B5 988 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 EDC3Q96F86 508 aaKnown RBP11.61□□□□□ -0.55
CHERP-201ENST00000198939 EYA3Q99504 573 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 ANKZF1Q9H8Y5 726 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 ATP6V0A2Q9Y487 856 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 YEATS4O95619 227 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 ATP2B4P23634 1241 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 CCT5P48643 541 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 TSGA10IPQ3SY00 556 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 IFIT1P09914 478 aaKnown RBP11.6□□□□□ -0.55
CHERP-201ENST00000198939 VSNL1P62760 191 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 TUBB2AQ13885 445 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 EP400NLQ6ZTU2 488 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 TUBB2BQ9BVA1 445 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 A0A0G2JLW4 131 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 SLC5A1P13866 664 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 CHRNA5P30532 468 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 INPP5BP32019 993 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 PNOCQ13519 176 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 SWT1Q5T5J6 900 aaKnown RBP11.6□□□□□ -0.55
CHERP-201ENST00000198939 XDHP47989 1333 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 EP400Q96L91 3159 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 CCDC196A0A1B0GTZ2 297 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 CYP21A2P08686 494 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 CHST3Q7LGC8 479 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 CELF1Q92879 486 aaKnown RBP11.6□□□□□ -0.55
CHERP-201ENST00000198939 SUFUQ9UMX1 484 aa11.6□□□□□ -0.55
CHERP-201ENST00000198939 IPO7O95373 1038 aaKnown RBP11.59□□□□□ -0.55
CHERP-201ENST00000198939 UBE4AQ14139 1066 aa11.59□□□□□ -0.55
CHERP-201ENST00000198939 ZNF594Q96JF6 807 aaPredicted RBP11.59□□□□□ -0.55
CHERP-201ENST00000198939 RIPOR2Q9Y4F9 1068 aa11.59□□□□□ -0.55
CHERP-201ENST00000198939 AKR1B15C9JRZ8 316 aaPredicted RBP11.59□□□□□ -0.55
CHERP-201ENST00000198939 CMA1P23946 247 aa11.59□□□□□ -0.55
CHERP-201ENST00000198939 CCDC102BQ68D86 513 aa11.59□□□□□ -0.55
CHERP-201ENST00000198939 FAM76AQ8TAV0 307 aa11.59□□□□□ -0.55
CHERP-201ENST00000198939 FHDC1Q9C0D6 1143 aaPredicted RBP11.59□□□□□ -0.55
CHERP-201ENST00000198939 VPS33BQ9H267 617 aa11.59□□□□□ -0.55
CHERP-201ENST00000198939 TLR7Q9NYK1 1049 aaKnown RBP11.59□□□□□ -0.55
CHERP-201ENST00000198939 USP5P45974 858 aa11.59□□□□□ -0.55
CHERP-201ENST00000198939 PUM3Q15397 648 aaKnown RBP11.59□□□□□ -0.55
CHERP-201ENST00000198939 ANO1Q5XXA6 986 aa11.59□□□□□ -0.55
CHERP-201ENST00000198939 GNL3LQ9NVN8 582 aaKnown RBP11.59□□□□□ -0.55
CHERP-201ENST00000198939 RAI14Q9P0K7 980 aa11.59□□□□□ -0.55
CHERP-201ENST00000198939 GGA1Q9UJY5 639 aa11.59□□□□□ -0.55
CHERP-201ENST00000198939 MINPP1Q9UNW1 487 aa11.59□□□□□ -0.55
CHERP-201ENST00000198939 MYO1BO43795 1136 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 MCM3P25205 808 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 CHRNDQ07001 517 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 MYSM1Q5VVJ2 828 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 MRPL44Q9H9J2 332 aaKnown RBP11.58□□□□□ -0.56
CHERP-201ENST00000198939 RAB21Q9UL25 225 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 MYH3P11055 1940 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 G3V3G9 751 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 PDE8BO95263 885 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 MTF1Q14872 753 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 PPP2R5AQ15172 486 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 MCMDC2Q4G0Z9 681 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 DCAF8Q5TAQ9 597 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 DPP8Q6V1X1 898 aaPredicted RBP11.58□□□□□ -0.56
CHERP-201ENST00000198939 POTEDQ86YR6 584 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 LPIN2Q92539 896 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 GDAP1L1Q96MZ0 367 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 NAPGQ99747 312 aaPredicted RBP11.58□□□□□ -0.56
CHERP-201ENST00000198939 DONSONQ9NYP3 566 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 DACH1Q9UI36 760 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 FAM169AQ9Y6X4 670 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 DDX60Q8IY21 1712 aaKnown RBP11.58□□□□□ -0.56
CHERP-201ENST00000198939 SOWAHDA6NJG2 315 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 CAVIN4Q5BKX8 364 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 FBXW10Q5XX13 1052 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 MSANTD4Q8NCY6 345 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 SYT17Q9BSW7 474 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 NFE2L3Q9Y4A8 694 aa11.58□□□□□ -0.56
CHERP-201ENST00000198939 GOLIM4O00461 696 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 KIF1CO43896 1103 aaKnown RBP11.57□□□□□ -0.56
CHERP-201ENST00000198939 CTDNEP1O95476 244 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 HNRNPH1P31943 449 aaKnown RBP11.57□□□□□ -0.56
CHERP-201ENST00000198939 BRAPQ7Z569 592 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 TC2NQ8N9U0 490 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 CPP00450 1065 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 SARNPP82979 210 aaKnown RBP11.57□□□□□ -0.56
CHERP-201ENST00000198939 STIM1Q13586 685 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 BCAS4Q8TDM0 211 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 BCS1LQ9Y276 419 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 LRRC24Q50LG9 513 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms