RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 USP14P54578 494 aa14.2□□□□□ -0.14
SYPL1-201ENST00000011473 RNF20Q5VTR2 975 aa14.2□□□□□ -0.14
SYPL1-201ENST00000011473 RCSD1Q6JBY9 416 aa14.2□□□□□ -0.14
SYPL1-201ENST00000011473 SAMD1Q6SPF0 538 aaPredicted RBP14.2□□□□□ -0.14
SYPL1-201ENST00000011473 NCOA7Q8NI08 942 aa14.2□□□□□ -0.14
SYPL1-201ENST00000011473 VCPKMTQ9H867 229 aa14.2□□□□□ -0.14
SYPL1-201ENST00000011473 GREB1LQ9C091 1923 aaPredicted RBP14.2□□□□□ -0.14
SYPL1-201ENST00000011473 CENPFP49454 3210 aa14.19□□□□□ -0.14
SYPL1-201ENST00000011473 TNKSO95271 1327 aa14.19□□□□□ -0.14
SYPL1-201ENST00000011473 F5H6K3 240 aa14.19□□□□□ -0.14
SYPL1-201ENST00000011473 PEX10O60683 326 aa14.19□□□□□ -0.14
SYPL1-201ENST00000011473 ECM2O94769 699 aaPredicted RBP14.19□□□□□ -0.14
SYPL1-201ENST00000011473 KLRC3Q07444 240 aa14.19□□□□□ -0.14
SYPL1-201ENST00000011473 IQCA1Q86XH1 822 aa14.19□□□□□ -0.14
SYPL1-201ENST00000011473 RPAP3Q9H6T3 665 aaPredicted RBP14.19□□□□□ -0.14
SYPL1-201ENST00000011473 SH2D4AQ9H788 454 aa14.19□□□□□ -0.14
SYPL1-201ENST00000011473 NDUFB10O96000 172 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 ALDH1A1P00352 501 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 ANTXR2P58335 489 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 ENAHQ8N8S7 591 aaPredicted RBP14.18□□□□□ -0.14
SYPL1-201ENST00000011473 C12orf42Q96LP6 360 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 TCEANC2Q96MN5 208 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 ZSCAN10Q96SZ4 725 aaPredicted RBP14.18□□□□□ -0.14
SYPL1-201ENST00000011473 TMEM47Q9BQJ4 181 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 UBAC1Q9BSL1 405 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 PTPRFP10586 1907 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 CA12O43570 354 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 CPA1P15085 419 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 ZKSCAN1P17029 563 aaPredicted RBP14.18□□□□□ -0.14
SYPL1-201ENST00000011473 FAM83BQ5T0W9 1011 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 MB21D2Q8IYB1 491 aaPredicted RBP14.18□□□□□ -0.14
SYPL1-201ENST00000011473 MKL1Q969V6 931 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 LRRC2Q9BYS8 371 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 ASCC2Q9H1I8 757 aaPredicted RBP14.18□□□□□ -0.14
SYPL1-201ENST00000011473 SENP2Q9HC62 589 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 GOPCQ9HD26 462 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 GPHNQ9NQX3 736 aaPredicted RBP14.18□□□□□ -0.14
SYPL1-201ENST00000011473 TCP11L1Q9NUJ3 509 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 SNX14Q9Y5W7 946 aa14.18□□□□□ -0.14
SYPL1-201ENST00000011473 NOVP48745 357 aa14.17□□□□□ -0.14
SYPL1-201ENST00000011473 SMCR8Q8TEV9 937 aaPredicted RBP14.17□□□□□ -0.14
SYPL1-201ENST00000011473 CPA4Q9UI42 421 aa14.17□□□□□ -0.14
SYPL1-201ENST00000011473 ISY1Q9ULR0 285 aaKnown RBP14.17□□□□□ -0.14
SYPL1-201ENST00000011473 MCCP23508 829 aa14.17□□□□□ -0.14
SYPL1-201ENST00000011473 LBX1P52954 281 aa14.17□□□□□ -0.14
SYPL1-201ENST00000011473 IRX3P78415 501 aaPredicted RBP14.17□□□□□ -0.14
SYPL1-201ENST00000011473 LPAR1Q92633 364 aa14.17□□□□□ -0.14
SYPL1-201ENST00000011473 NEK1Q96PY6 1258 aa14.17□□□□□ -0.14
SYPL1-201ENST00000011473 PARK7Q99497 189 aaKnown RBP14.17□□□□□ -0.14
SYPL1-201ENST00000011473 P2RX7Q99572 595 aaKnown RBP14.17□□□□□ -0.14
SYPL1-201ENST00000011473 ZFYVE28Q9HCC9 887 aa14.17□□□□□ -0.14
SYPL1-201ENST00000011473 FBXO28Q9NVF7 368 aa14.17□□□□□ -0.14
SYPL1-201ENST00000011473 SAGE1Q9NXZ1 904 aa14.17□□□□□ -0.14
SYPL1-201ENST00000011473 LOC285556D6RIA3 1793 aa14.16□□□□□ -0.14
SYPL1-201ENST00000011473 HOXA7P31268 230 aaPredicted RBP14.16□□□□□ -0.14
SYPL1-201ENST00000011473 SLFN13Q68D06 897 aa14.16□□□□□ -0.14
SYPL1-201ENST00000011473 POTEEQ6S8J3 1075 aa14.16□□□□□ -0.14
SYPL1-201ENST00000011473 IFIT3O14879 490 aaKnown RBP14.15□□□□□ -0.14
SYPL1-201ENST00000011473 PRC1O43663 620 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 TLR2O60603 784 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 HSPA8P11142 646 aaKnown RBP14.15□□□□□ -0.14
SYPL1-201ENST00000011473 TOP1P11387 765 aaKnown RBP14.15□□□□□ -0.14
SYPL1-201ENST00000011473 SEC23AQ15436 765 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 CATSPERGQ6ZRH7 1159 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 JAKMIP1Q96N16 626 aaKnown RBP14.15□□□□□ -0.14
SYPL1-201ENST00000011473 ZCCHC17Q9NP64 241 aaKnown RBP14.15□□□□□ -0.14
SYPL1-201ENST00000011473 HTTP42858 3142 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 USP17L15C9J2P7 530 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 USP17L13C9JLJ4 530 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 USP17L11C9JVI0 530 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 USP17L18D6R9N7 530 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 USP17L22D6RA61 530 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 USP17L17D6RBQ6 530 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 USP17L19D6RCP7 530 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 USP17L20D6RJB6 530 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 WDR46O15213 610 aaKnown RBP14.15□□□□□ -0.14
SYPL1-201ENST00000011473 FLOT1O75955 427 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 OSBPP22059 807 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 USP17L24Q0WX57 530 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 PABPC4Q13310 644 aaKnown RBP eCLIP14.15□□□□□ -0.145e-15■■■■■ 42.5
SYPL1-201ENST00000011473 TSGA10IPQ3SY00 556 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 IFIT1BQ5T764 474 aaKnown RBP14.15□□□□□ -0.14
SYPL1-201ENST00000011473 KCTD1Q719H9 257 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 DGKHQ86XP1 1220 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 ANKRD13CQ8N6S4 541 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 GMCL1P1Q8NEA9 526 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 KCNB2Q92953 911 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 TTC14Q96N46 770 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 PNMA3Q9UL41 463 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 SLC45A1Q9Y2W3 748 aa14.15□□□□□ -0.14
SYPL1-201ENST00000011473 GPR25O00155 361 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 MCM5P33992 734 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 SLC1A4P43007 532 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 HERVK_113P62684 666 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 TMEM67Q5HYA8 995 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 PNMA1Q8ND90 353 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 ZNF296Q8WUU4 475 aaPredicted RBP14.14□□□□□ -0.15
SYPL1-201ENST00000011473 KAT14Q9H8E8 782 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 TXNRD2Q9NNW7 524 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms