RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Myo19Q5SV80 963 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Riox2Q8CD15 465 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Bst2Q8R2Q8 172 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Tdrd3Q91W18 743 aaKnown RBP11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Hip1rQ9JKY5 1068 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Kmt5bQ3U8K7 883 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Pls1Q3V0K9 630 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Ckap2Q3V1H1 664 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Cdca7Q9D0M2 382 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Ltbp2O08999 1813 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Nap1l3Q794H2 544 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Fbxo28Q8BIG4 368 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 R3hcc1Q8BSI6 488 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Rasgrp4Q8BTM9 673 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Wasf1Q8R5H6 559 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Fzd9Q9R216 592 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Aox1O54754 1333 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Psme4Q5SSW2 1843 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Mmp10O55123 476 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Nsrp1Q5NCR9 542 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Dnaaf2Q8BPI1 814 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Scfd2Q8BTY8 684 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Sulf1Q8K007 870 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Evc2Q8K1G2 1220 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Dppa3Q8QZY3 150 aa11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 PtmsQ9D0J8 101 aaKnown RBP11.46□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Rgs12Q8CGE9 1381 aa11.46□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 NynrinQ5DTZ0 1840 aa11.46□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Myh14Q6URW6 2000 aa11.46□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Slc27a1Q60714 646 aa11.46□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Swap70Q6A028 585 aaKnown RBP11.46□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Pip5kl1Q6U7H8 395 aa11.46□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Bag4Q8CI61 457 aa11.46□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ccer1Q9CQL2 403 aa11.46□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 4921524L21RikQ9D5T2 438 aa11.46□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Cep63Q3UPP8 700 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ireb2Q811J3 963 aaKnown RBP11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Zfp113Q8C689 439 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ndufb9Q9CQJ8 179 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 SmapQ9R0P4 181 aaKnown RBP11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Leo1Q5XJE5 667 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Vps37dQ810I0 261 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Phf20l1Q8CCJ9 1013 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Mrps25Q9D125 171 aaKnown RBP11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Zbtb22Q9Z0G7 638 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 DaxxO35613 739 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Cbx2P30658 519 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Gtf2f1Q3THK3 508 aaKnown RBP11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ppp2r5bQ6PD28 497 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Trpv1Q704Y3 839 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Etnk1Q9D4V0 363 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Styxl1Q9DAR2 321 aa11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Telo2Q9DC40 840 aaKnown RBP11.45□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 AfdnQ9QZQ1 1820 aaKnown RBP11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Adgre1Q61549 931 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 PigsQ6PD26 555 aaKnown RBP11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Cypt1Q8CH20 168 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Trim59Q922Y2 403 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Celf2Q9Z0H4 508 aaKnown RBP11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 S1pr4Q9Z0L1 386 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Peak1Q69Z38 1735 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Flot1O08917 428 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 PgfP49764 158 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Cdan1Q8CC12 1239 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 FAM186AQ9D9R9 1790 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 SisF8VQM5 1818 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Pus7B7ZNL8 666 aaKnown RBP11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Slc4a9E9PUP3 929 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Oog1E9Q5G7 496 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ankrd13cQ3UX43 541 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ccdc84Q4VA36 332 aaKnown RBP11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Clca4aQ6Q473 924 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Gripap1Q8VD04 806 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Rfc4Q99J62 364 aa11.44□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 SynrgQ5SV85 1306 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Kcna1P16388 495 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Vmn1r209Q5NC97 312 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Slitrk3Q810B9 980 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Morc2bQ8C5W4 1022 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Kiaa1024Q8K3V7 917 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Prpf3Q922U1 683 aaKnown RBP11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ankrd35E9Q9D8 996 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Tph1P17532 447 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Gadd45bP22339 160 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Lilrb3P97484 841 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Madcam1Q61826 405 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Sv2cQ69ZS6 727 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Sec62Q8BU14 398 aaKnown RBP11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 BaatQ91X34 420 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Azi2Q9QYP6 405 aa11.43□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Sez6lQ6P1D5 963 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Kiaa1524Q8BWY9 907 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Yars2Q8BYL4 472 aaKnown RBP11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Zfp317Q8C0Q5 607 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 DpydQ8CHR6 1025 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Fez1Q8K0X8 392 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ubxn8Q9QZ49 277 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Dnaaf5B9EJR8 853 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 TrdnE9Q9K5 693 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Mboat4P0C7A3 435 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms