RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ERVK-9P63128 1117 aa9.06□□□□□ -0.96
PHGDH-225ENST00000641720 ERVK-24P63145 666 aa9.06□□□□□ -0.96
PHGDH-225ENST00000641720 PLCB2Q00722 1185 aa9.06□□□□□ -0.96
PHGDH-225ENST00000641720 MECOMQ03112 1051 aa9.06□□□□□ -0.96
PHGDH-225ENST00000641720 G3BP1Q13283 466 aaKnown RBP eCLIP9.06□□□□□ -0.961e-8■□□□□ 9.2
PHGDH-225ENST00000641720 OS9Q13438 667 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-225ENST00000641720 ZNF697Q5TEC3 545 aa9.06□□□□□ -0.96
PHGDH-225ENST00000641720 GPR142Q7Z601 462 aa9.06□□□□□ -0.96
PHGDH-225ENST00000641720 APBA2Q99767 749 aa9.06□□□□□ -0.96
PHGDH-225ENST00000641720 NUDT12Q9BQG2 462 aa9.06□□□□□ -0.96
PHGDH-225ENST00000641720 USP17L5A8MUK1 530 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 HOXC6P09630 235 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 CYBAP13498 195 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 ZKSCAN1P17029 563 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-225ENST00000641720 COL9A1P20849 921 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 EPHB4P54760 987 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 BACE1P56817 501 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 RTP1P59025 263 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 SMAD3P84022 425 aaKnown RBP9.05□□□□□ -0.96
PHGDH-225ENST00000641720 PICALMQ13492 652 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 HDAC1Q13547 482 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-225ENST00000641720 MTMR2Q13614 643 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 AAMPQ13685 434 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 PI16Q6UXB8 463 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 NSUN4Q96CB9 384 aaKnown RBP9.05□□□□□ -0.96
PHGDH-225ENST00000641720 DCTPP1Q9H773 170 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 PDLIM7Q9NR12 457 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 EMILIN3Q9NT22 766 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 TLR7Q9NYK1 1049 aaKnown RBP9.05□□□□□ -0.96
PHGDH-225ENST00000641720 CEP126Q9P2H0 1117 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 SCN5AQ14524 2016 aa9.05□□□□□ -0.96
PHGDH-225ENST00000641720 A0A1B0GUL7 405 aa9.04□□□□□ -0.96
PHGDH-225ENST00000641720 TRIM43BA6NCK2 446 aa9.04□□□□□ -0.96
PHGDH-225ENST00000641720 TULP1O00294 542 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-225ENST00000641720 IGHDP01880 384 aa9.04□□□□□ -0.96
PHGDH-225ENST00000641720 MAP2K5Q13163 448 aa9.04□□□□□ -0.96
PHGDH-225ENST00000641720 TNNI3KQ59H18 835 aa9.04□□□□□ -0.96
PHGDH-225ENST00000641720 SH3RF1Q7Z6J0 888 aa9.04□□□□□ -0.96
PHGDH-225ENST00000641720 ZSCAN29Q8IWY8 852 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-225ENST00000641720 TRMT44Q8IYL2 757 aaKnown RBP9.04□□□□□ -0.96
PHGDH-225ENST00000641720 NPLOC4Q8TAT6 608 aa9.04□□□□□ -0.96
PHGDH-225ENST00000641720 TRIM43Q96BQ3 446 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-225ENST00000641720 C12orf42Q96LP6 360 aa9.04□□□□□ -0.96
PHGDH-225ENST00000641720 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.04□□□□□ -0.962e-7■■■■□ 19.6
PHGDH-225ENST00000641720 IL1RAPL2Q9NP60 686 aa9.04□□□□□ -0.96
PHGDH-225ENST00000641720 FPGT-TNNI3KV9GXZ4 949 aa9.04□□□□□ -0.96
PHGDH-225ENST00000641720 COL4A4P53420 1690 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-225ENST00000641720 ATG2AQ2TAZ0 1938 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 MYH4Q9Y623 1939 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 DNM1LO00429 736 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 SMARCA5O60264 1052 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-225ENST00000641720 MAP4K4O95819 1239 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-225ENST00000641720 NEFLP07196 543 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 MAPK4P31152 587 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 RGS2P41220 211 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 PABPC4Q13310 644 aaKnown RBP eCLIP9.03□□□□□ -0.96
PHGDH-225ENST00000641720 GRB14Q14449 540 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 TPRNQ4KMQ1 711 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 LBX2Q6XYB7 198 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 ADGRA1Q86SQ6 560 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 ERC1Q8IUD2 1116 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 GPRC5AQ8NFJ5 357 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 TET1Q8NFU7 2136 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 RHPN1Q8TCX5 695 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 LPAR1Q92633 364 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 EAF2Q96CJ1 260 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-225ENST00000641720 DBNDD2Q9BQY9 259 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 SENP6Q9GZR1 1112 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-225ENST00000641720 HMG20BQ9P0W2 317 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 DDX20Q9UHI6 824 aaKnown RBP9.03□□□□□ -0.96
PHGDH-225ENST00000641720 HERC5Q9UII4 1024 aaKnown RBP9.03□□□□□ -0.96
PHGDH-225ENST00000641720 DBNLQ9UJU6 430 aaKnown RBP9.03□□□□□ -0.96
PHGDH-225ENST00000641720 ZNF318Q5VUA4 2279 aa9.03□□□□□ -0.96
PHGDH-225ENST00000641720 TMEM265A0A087WTH1 108 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 RAB11FIP3O75154 756 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 PTPREP23469 700 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 ARID4AP29374 1257 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-225ENST00000641720 ATN1P54259 1190 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-225ENST00000641720 TIMM10P62072 90 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 HSP90AB4PQ58FF6 505 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 C1orf53Q5VUE5 145 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 PLEKHH3Q7Z736 793 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 AACSQ86V21 672 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 DZIP1Q86YF9 867 aaKnown RBP9.02□□□□□ -0.97
PHGDH-225ENST00000641720 HOMEZQ8IX15 550 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 ZGPATQ8N5A5 531 aaKnown RBP9.02□□□□□ -0.97
PHGDH-225ENST00000641720 KIF1BPQ96EK5 621 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 XAGE2Q96GT9 111 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 GPR108Q9NPR9 543 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 BTBD7Q9P203 1132 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 ZBTB21Q9ULJ3 1066 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 USP34Q70CQ2 3546 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 TANC1Q9C0D5 1861 aa9.02□□□□□ -0.97
PHGDH-225ENST00000641720 ROBO3Q96MS0 1386 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 C5orf42Q9H799 3197 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 ASNSP08243 561 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 HOXD11P31277 338 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-225ENST00000641720 MCAMP43121 646 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 IRX3P78415 501 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-225ENST00000641720 GRIN2CQ14957 1233 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms