RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 PI4KBQ9UBF8 816 aa9.72□□□□□ -0.85
PHGDH-217ENST00000641455 TACC3Q9Y6A5 838 aa9.72□□□□□ -0.85
PHGDH-217ENST00000641455 CDH23Q9H251 3354 aa9.71□□□□□ -0.85
PHGDH-217ENST00000641455 ITGB8P26012 769 aa9.71□□□□□ -0.86
PHGDH-217ENST00000641455 GRB14Q14449 540 aa9.71□□□□□ -0.86
PHGDH-217ENST00000641455 LRRC41Q15345 812 aa9.71□□□□□ -0.86
PHGDH-217ENST00000641455 SHROOM1Q2M3G4 852 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-217ENST00000641455 MICALL1Q8N3F8 863 aa9.71□□□□□ -0.86
PHGDH-217ENST00000641455 TSPYL2Q9H2G4 693 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-217ENST00000641455 TMEM39AQ9NV64 488 aa9.71□□□□□ -0.86
PHGDH-217ENST00000641455 RAI14Q9P0K7 980 aa9.71□□□□□ -0.86
PHGDH-217ENST00000641455 ZBTB21Q9ULJ3 1066 aa9.71□□□□□ -0.86
PHGDH-217ENST00000641455 USP17L15C9J2P7 530 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 USP17L13C9JLJ4 530 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 USP17L11C9JVI0 530 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 USP17L18D6R9N7 530 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 USP17L22D6RA61 530 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 USP17L17D6RBQ6 530 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 USP17L19D6RCP7 530 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 USP17L20D6RJB6 530 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 SEPT4O43236 478 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 CNMDO75829 334 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 CIAO1O76071 339 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 MAP4K4O95819 1239 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-217ENST00000641455 HOXC6P09630 235 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 JAG1P78504 1218 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 USP17L24Q0WX57 530 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 FAM47AQ5JRC9 791 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 EMILIN3Q9NT22 766 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 PLXNA1Q9UIW2 1896 aa9.7□□□□□ -0.86
PHGDH-217ENST00000641455 GRXCR1A8MXD5 290 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 KIAA0355O15063 1070 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 SIPA1L1O43166 1804 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 ADORA2AP29274 412 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 PBX2P40425 430 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 IL15P40933 162 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-217ENST00000641455 PDS5AQ29RF7 1337 aaKnown RBP9.69□□□□□ -0.86
PHGDH-217ENST00000641455 PRAMEF19Q5SWL8 479 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 OLFML2BQ68BL8 750 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 MAPKAPK5Q8IW41 473 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 WDR63Q8IWG1 891 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 SH3RF3Q8TEJ3 882 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-217ENST00000641455 ZNF384Q8TF68 577 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 SYNGAP1Q96PV0 1343 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 PBX4Q9BYU1 374 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 USP44Q9H0E7 712 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 DHX36Q9H2U1 1008 aaKnown RBP9.69□□□□□ -0.86
PHGDH-217ENST00000641455 FBXO3Q9UK99 471 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 MUC3AQ02505 3323 aa9.69□□□□□ -0.86
PHGDH-217ENST00000641455 APBB1O00213 710 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 TIMM10P62072 90 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 ADGRE1Q14246 886 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 MVPQ14764 893 aaKnown RBP9.68□□□□□ -0.86
PHGDH-217ENST00000641455 SKIV2LQ15477 1246 aaKnown RBP9.68□□□□□ -0.86
PHGDH-217ENST00000641455 C1orf53Q5VUE5 145 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 CCDC174Q6PII3 467 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 TBC1D9Q6ZT07 1266 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 SLC44A5Q8NCS7 719 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 NSUN4Q96CB9 384 aaKnown RBP9.68□□□□□ -0.86
PHGDH-217ENST00000641455 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.68□□□□□ -0.86
PHGDH-217ENST00000641455 LRFN3Q9BTN0 628 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 DNAJC18Q9H819 358 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 XPNPEP3Q9NQH7 507 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 GINM1Q9NU53 330 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 SLC5A4Q9NY91 659 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 BTBD7Q9P203 1132 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 SAP30BPQ9UHR5 308 aaKnown RBP9.68□□□□□ -0.86
PHGDH-217ENST00000641455 PHF24Q9UPV7 400 aa9.68□□□□□ -0.86
PHGDH-217ENST00000641455 PA2G4Q9UQ80 394 aaKnown RBP9.68□□□□□ -0.86
PHGDH-217ENST00000641455 DCDC2CA8MYV0 355 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 GH2P01242 217 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 HLA-DOAP06340 250 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 RARBP10826 455 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 VCAM1P19320 739 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 USP14P54578 494 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 RAB3GAP1Q15042 981 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 RAB30Q15771 203 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 AAK1Q2M2I8 961 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 TMEM31Q5JXX7 168 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 GORABQ5T7V8 394 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 CATSPERGQ6ZRH7 1159 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 RNF180Q86T96 592 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 ALYREFQ86V81 257 aaKnown RBP9.67□□□□□ -0.86
PHGDH-217ENST00000641455 FOXP4Q8IVH2 680 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-217ENST00000641455 TGFBRAP1Q8WUH2 860 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 XAGE2Q96GT9 111 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 NEUROD6Q96NK8 337 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 AATFQ9NY61 560 aaKnown RBP eCLIP9.67□□□□□ -0.86
PHGDH-217ENST00000641455 LRP2BPQ9P2M1 347 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 MSRAQ9UJ68 235 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 PALD1Q9ULE6 856 aa9.67□□□□□ -0.86
PHGDH-217ENST00000641455 ARIH1Q9Y4X5 557 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-217ENST00000641455 FLT1P17948 1338 aa9.66□□□□□ -0.86
PHGDH-217ENST00000641455 A0A1B0GUL7 405 aa9.66□□□□□ -0.86
PHGDH-217ENST00000641455 A0A1W2PQ45 241 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-217ENST00000641455 A0A1W2PQY0 241 aa9.66□□□□□ -0.86
PHGDH-217ENST00000641455 SPDYE16A6NNV3 312 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-217ENST00000641455 BAG3O95817 575 aa9.66□□□□□ -0.86
PHGDH-217ENST00000641455 PGK1P00558 417 aa9.66□□□□□ -0.86
PHGDH-217ENST00000641455 UBTFL1P0CB47 393 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms