RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 USP17L12C9JPN9 530 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 USP17L21D6R901 530 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 MYO1BO43795 1136 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 GNRH1P01148 92 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 RGS19P49795 217 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 PTPN12Q05209 780 aaKnown RBP13.18□□□□□ -0.3
CASC19-229ENST00000641418 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 PTK7Q13308 1070 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 PRKG1Q13976 671 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 CFAP100Q494V2 611 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 Q6ZVU0 165 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 TDRD7Q8NHU6 1098 aaKnown RBP13.18□□□□□ -0.3
CASC19-229ENST00000641418 PUS3Q9BZE2 481 aaKnown RBP13.18□□□□□ -0.3
CASC19-229ENST00000641418 JAG2Q9Y219 1238 aa13.18□□□□□ -0.3
CASC19-229ENST00000641418 PTPRCP08575 1304 aa13.17□□□□□ -0.3
CASC19-229ENST00000641418 CAPN5O15484 640 aaPredicted RBP13.17□□□□□ -0.3
CASC19-229ENST00000641418 HIBADHP31937 336 aaKnown RBP13.17□□□□□ -0.3
CASC19-229ENST00000641418 TM4SF4P48230 202 aa13.17□□□□□ -0.3
CASC19-229ENST00000641418 CLDN10P78369 228 aa13.17□□□□□ -0.3
CASC19-229ENST00000641418 RABL6Q3YEC7 729 aaPredicted RBP13.17□□□□□ -0.3
CASC19-229ENST00000641418 LDLRAD1Q5T700 205 aa13.17□□□□□ -0.3
CASC19-229ENST00000641418 FAM84BQ96KN1 310 aaPredicted RBP13.17□□□□□ -0.3
CASC19-229ENST00000641418 PRMT6Q96LA8 375 aaPredicted RBP13.17□□□□□ -0.3
CASC19-229ENST00000641418 ANGEL1Q9UNK9 670 aaKnown RBP13.17□□□□□ -0.3
CASC19-229ENST00000641418 RIPOR2Q9Y4F9 1068 aa13.17□□□□□ -0.3
CASC19-229ENST00000641418 PCDHAC2Q9Y5I4 1007 aa13.17□□□□□ -0.3
CASC19-229ENST00000641418 PPP2R3BQ9Y5P8 575 aa13.17□□□□□ -0.3
CASC19-229ENST00000641418 FAM205AQ6ZU69 1335 aa13.16□□□□□ -0.3
CASC19-229ENST00000641418 MROH5Q6ZUA9 1318 aa13.16□□□□□ -0.3
CASC19-229ENST00000641418 AVPP01185 164 aa13.16□□□□□ -0.3
CASC19-229ENST00000641418 ADH1AP07327 375 aa13.16□□□□□ -0.3
CASC19-229ENST00000641418 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
CASC19-229ENST00000641418 GYG1P46976 350 aa13.16□□□□□ -0.3
CASC19-229ENST00000641418 RBM5P52756 815 aaKnown RBP eCLIP13.16□□□□□ -0.3
CASC19-229ENST00000641418 CTC1Q2NKJ3 1217 aa13.16□□□□□ -0.3
CASC19-229ENST00000641418 SUPT20HL1Q3ZLR7 823 aa13.16□□□□□ -0.3
CASC19-229ENST00000641418 SIX5Q8N196 739 aa13.16□□□□□ -0.3
CASC19-229ENST00000641418 SSH1Q8WYL5 1049 aa13.16□□□□□ -0.3
CASC19-229ENST00000641418 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
CASC19-229ENST00000641418 PAPPA2Q9BXP8 1791 aa13.15□□□□□ -0.3
CASC19-229ENST00000641418 CLRN2A0PK11 232 aa13.15□□□□□ -0.3
CASC19-229ENST00000641418 PPP1R12BO60237 982 aaPredicted RBP13.15□□□□□ -0.3
CASC19-229ENST00000641418 MLLT1Q03111 559 aaPredicted RBP13.15□□□□□ -0.3
CASC19-229ENST00000641418 SLFN5Q08AF3 891 aa13.15□□□□□ -0.3
CASC19-229ENST00000641418 SREBF2Q12772 1141 aa13.15□□□□□ -0.3
CASC19-229ENST00000641418 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
CASC19-229ENST00000641418 CRTC2Q53ET0 693 aaPredicted RBP13.15□□□□□ -0.3
CASC19-229ENST00000641418 MFSD14BQ5SR56 506 aa13.15□□□□□ -0.3
CASC19-229ENST00000641418 CCDC102BQ68D86 513 aa13.15□□□□□ -0.3
CASC19-229ENST00000641418 CTU1Q7Z7A3 348 aaKnown RBP13.15□□□□□ -0.3
CASC19-229ENST00000641418 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
CASC19-229ENST00000641418 ZFAND3Q9H8U3 227 aa13.15□□□□□ -0.3
CASC19-229ENST00000641418 NOVA2Q9UNW9 492 aaKnown RBP13.15□□□□□ -0.3
CASC19-229ENST00000641418 UNCXA6NJT0 531 aa13.14□□□□□ -0.31
CASC19-229ENST00000641418 ZBTB7BO15156 539 aaPredicted RBP13.14□□□□□ -0.31
CASC19-229ENST00000641418 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
CASC19-229ENST00000641418 FBXO33Q7Z6M2 555 aa13.14□□□□□ -0.31
CASC19-229ENST00000641418 VPS37DQ86XT2 251 aa13.14□□□□□ -0.31
CASC19-229ENST00000641418 ANKMY2Q8IV38 441 aa13.14□□□□□ -0.31
CASC19-229ENST00000641418 ANKRD44Q8N8A2 993 aa13.14□□□□□ -0.31
CASC19-229ENST00000641418 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
CASC19-229ENST00000641418 VEZTQ9HBM0 779 aa13.14□□□□□ -0.31
CASC19-229ENST00000641418 TTF2Q9UNY4 1162 aaKnown RBP13.14□□□□□ -0.31
CASC19-229ENST00000641418 FZD1Q9UP38 647 aa13.14□□□□□ -0.31
CASC19-229ENST00000641418 COL1A1P02452 1464 aaPredicted RBP13.14□□□□□ -0.31
CASC19-229ENST00000641418 UPP2O95045 317 aa13.13□□□□□ -0.31
CASC19-229ENST00000641418 CBLBQ13191 982 aa13.13□□□□□ -0.31
CASC19-229ENST00000641418 RASA3Q14644 834 aa13.13□□□□□ -0.31
CASC19-229ENST00000641418 ALDH1L2Q3SY69 923 aa13.13□□□□□ -0.31
CASC19-229ENST00000641418 LRRC24Q50LG9 513 aa13.13□□□□□ -0.31
CASC19-229ENST00000641418 CAVIN4Q5BKX8 364 aa13.13□□□□□ -0.31
CASC19-229ENST00000641418 NOM1Q5C9Z4 860 aaKnown RBP13.13□□□□□ -0.31
CASC19-229ENST00000641418 METTL24Q5JXM2 366 aa13.13□□□□□ -0.31
CASC19-229ENST00000641418 PDE8BO95263 885 aa13.12□□□□□ -0.31
CASC19-229ENST00000641418 INHBEP58166 350 aa13.12□□□□□ -0.31
CASC19-229ENST00000641418 TNFAIP1Q13829 316 aa13.12□□□□□ -0.31
CASC19-229ENST00000641418 NBPF12Q5TAG4 269 aaPredicted RBP13.12□□□□□ -0.31
CASC19-229ENST00000641418 TPCN2Q8NHX9 752 aa13.12□□□□□ -0.31
CASC19-229ENST00000641418 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
CASC19-229ENST00000641418 IRX2Q9BZI1 471 aaPredicted RBP13.12□□□□□ -0.31
CASC19-229ENST00000641418 ZNF70Q9UC06 446 aaPredicted RBP13.12□□□□□ -0.31
CASC19-229ENST00000641418 PSME4Q14997 1843 aa13.12□□□□□ -0.31
CASC19-229ENST00000641418 AOX1Q06278 1338 aa13.12□□□□□ -0.31
CASC19-229ENST00000641418 MYH3P11055 1940 aa13.11□□□□□ -0.31
CASC19-229ENST00000641418 MANSC4A6NHS7 340 aaPredicted RBP13.11□□□□□ -0.31
CASC19-229ENST00000641418 GPR25O00155 361 aa13.11□□□□□ -0.31
CASC19-229ENST00000641418 FRAT2O75474 233 aaPredicted RBP13.11□□□□□ -0.31
CASC19-229ENST00000641418 IREB2P48200 963 aaKnown RBP13.11□□□□□ -0.31
CASC19-229ENST00000641418 SEC13P55735 322 aa13.11□□□□□ -0.31
CASC19-229ENST00000641418 PKN2Q16513 984 aaKnown RBP13.11□□□□□ -0.31
CASC19-229ENST00000641418 DZIP1LQ8IYY4 767 aaKnown RBP13.11□□□□□ -0.31
CASC19-229ENST00000641418 MEIOBQ8N635 442 aa13.11□□□□□ -0.31
CASC19-229ENST00000641418 VGLL2Q8N8G2 317 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms