RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 EMILIN3Q9NT22 766 aa21.24■□□□□ 0.99
PTPN11-207ENST00000639857 MYPNQ86TC9 1320 aa21.24■□□□□ 0.99
PTPN11-207ENST00000639857 ROBO3Q96MS0 1386 aa21.23■□□□□ 0.99
PTPN11-207ENST00000639857 GPAA1O43292 621 aa21.23■□□□□ 0.99
PTPN11-207ENST00000639857 GUCY1A2P33402 732 aa21.23■□□□□ 0.99
PTPN11-207ENST00000639857 PDE1AP54750 535 aa21.23■□□□□ 0.99
PTPN11-207ENST00000639857 CTR9Q6PD62 1173 aa21.23■□□□□ 0.99
PTPN11-207ENST00000639857 ANKRD13CQ8N6S4 541 aa21.23■□□□□ 0.99
PTPN11-207ENST00000639857 EVI5LQ96CN4 794 aa21.23■□□□□ 0.99
PTPN11-207ENST00000639857 ZNF333Q96JL9 665 aa21.23■□□□□ 0.99
PTPN11-207ENST00000639857 MORF4L1Q9UBU8 362 aa21.23■□□□□ 0.99
PTPN11-207ENST00000639857 SUPT16HQ9Y5B9 1047 aaKnown RBP21.23■□□□□ 0.99
PTPN11-207ENST00000639857 GSG1L2A8MUP6 293 aa21.22■□□□□ 0.99
PTPN11-207ENST00000639857 EVX2Q03828 476 aa21.22■□□□□ 0.99
PTPN11-207ENST00000639857 KIAA0100Q14667 2235 aaKnown RBP21.22■□□□□ 0.99
PTPN11-207ENST00000639857 CDK8P49336 464 aa21.21■□□□□ 0.99
PTPN11-207ENST00000639857 SEPT2Q15019 361 aa21.21■□□□□ 0.99
PTPN11-207ENST00000639857 ZMYM1Q5SVZ6 1142 aa21.21■□□□□ 0.99
PTPN11-207ENST00000639857 SLC44A5Q8NCS7 719 aa21.21■□□□□ 0.99
PTPN11-207ENST00000639857 DYNLL2Q96FJ2 89 aa21.21■□□□□ 0.99
PTPN11-207ENST00000639857 MPHOSPH10O00566 681 aaKnown RBP21.2■□□□□ 0.98
PTPN11-207ENST00000639857 TNPO2O14787 897 aaKnown RBP21.2■□□□□ 0.98
PTPN11-207ENST00000639857 HERVK_113P62684 666 aa21.2■□□□□ 0.98
PTPN11-207ENST00000639857 RAET1EQ8TD07 263 aa21.2■□□□□ 0.98
PTPN11-207ENST00000639857 SH2D4AQ9H788 454 aa21.2■□□□□ 0.98
PTPN11-207ENST00000639857 USP17L15C9J2P7 530 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 USP17L13C9JLJ4 530 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 USP17L11C9JVI0 530 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 USP17L18D6R9N7 530 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 USP17L22D6RA61 530 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 USP17L17D6RBQ6 530 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 USP17L19D6RCP7 530 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 USP17L20D6RJB6 530 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 M0R2C6 588 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 VCAM1P19320 739 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 PRKCZQ05513 592 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 USP17L24Q0WX57 530 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 IRF5Q13568 498 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 ACER1Q8TDN7 264 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 COA7Q96BR5 231 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 NACAP1Q9BZK3 213 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 LNPKQ9C0E8 428 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 PARP14Q460N5 1801 aa21.19■□□□□ 0.98
PTPN11-207ENST00000639857 CYP2D7A0A087X1C5 515 aa21.18■□□□□ 0.98
PTPN11-207ENST00000639857 PATL2C9JE40 543 aaKnown RBP21.18■□□□□ 0.98
PTPN11-207ENST00000639857 NUCB1Q02818 461 aa21.18■□□□□ 0.98
PTPN11-207ENST00000639857 LBX2Q6XYB7 198 aa21.18■□□□□ 0.98
PTPN11-207ENST00000639857 CHD1LQ86WJ1 897 aa21.18■□□□□ 0.98
PTPN11-207ENST00000639857 SLAIN1Q8ND83 568 aa21.18■□□□□ 0.98
PTPN11-207ENST00000639857 LPAR1Q92633 364 aa21.18■□□□□ 0.98
PTPN11-207ENST00000639857 P2RX7Q99572 595 aaKnown RBP21.18■□□□□ 0.98
PTPN11-207ENST00000639857 ZNF287Q9HBT7 754 aa21.18■□□□□ 0.98
PTPN11-207ENST00000639857 ARHGEF10LQ9HCE6 1279 aa21.18■□□□□ 0.98
PTPN11-207ENST00000639857 A0A0G2JMZ2 1700 aa21.18■□□□□ 0.98
PTPN11-207ENST00000639857 PLXNB2O15031 1838 aa21.18■□□□□ 0.98
PTPN11-207ENST00000639857 RLFQ13129 1914 aa21.17■□□□□ 0.98
PTPN11-207ENST00000639857 IGHDP01880 384 aa21.17■□□□□ 0.98
PTPN11-207ENST00000639857 AKR1B1P15121 316 aa21.17■□□□□ 0.98
PTPN11-207ENST00000639857 GRK4P32298 578 aa21.17■□□□□ 0.98
PTPN11-207ENST00000639857 TDO2P48775 406 aa21.17■□□□□ 0.98
PTPN11-207ENST00000639857 ICA1Q05084 483 aa21.17■□□□□ 0.98
PTPN11-207ENST00000639857 ZYXQ15942 572 aaKnown RBP21.17■□□□□ 0.98
PTPN11-207ENST00000639857 CATSPERGQ6ZRH7 1159 aa21.17■□□□□ 0.98
PTPN11-207ENST00000639857 TMEM106CQ9BVX2 250 aa21.17■□□□□ 0.98
PTPN11-207ENST00000639857 OSBPL3Q9H4L5 887 aa21.17■□□□□ 0.98
PTPN11-207ENST00000639857 EPB41L4AQ9HCS5 686 aaPredicted RBP21.17■□□□□ 0.98
PTPN11-207ENST00000639857 MYH4Q9Y623 1939 aa21.16■□□□□ 0.98
PTPN11-207ENST00000639857 GPRC5AQ8NFJ5 357 aa21.16■□□□□ 0.98
PTPN11-207ENST00000639857 PXYLP1Q8TE99 480 aa21.16■□□□□ 0.98
PTPN11-207ENST00000639857 KANSL2Q9H9L4 492 aa21.16■□□□□ 0.98
PTPN11-207ENST00000639857 A0A1W2PRG0 241 aa21.15■□□□□ 0.98
PTPN11-207ENST00000639857 APPP05067 770 aa21.15■□□□□ 0.98
PTPN11-207ENST00000639857 FLT3LGP49771 235 aa21.15■□□□□ 0.98
PTPN11-207ENST00000639857 IFNL3Q8IZI9 196 aa21.15■□□□□ 0.98
PTPN11-207ENST00000639857 SH3TC2Q8TF17 1288 aa21.15■□□□□ 0.98
PTPN11-207ENST00000639857 HELLSQ9NRZ9 838 aa21.15■□□□□ 0.98
PTPN11-207ENST00000639857 GABRQQ9UN88 632 aa21.15■□□□□ 0.98
PTPN11-207ENST00000639857 TMX2Q9Y320 296 aa21.15■□□□□ 0.98
PTPN11-207ENST00000639857 RABGAP1Q9Y3P9 1069 aa21.15■□□□□ 0.98
PTPN11-207ENST00000639857 TNRC18O15417 2968 aaPredicted RBP21.14■□□□□ 0.97
PTPN11-207ENST00000639857 BRCA2P51587 3418 aa21.14■□□□□ 0.97
PTPN11-207ENST00000639857 SMIM22K7EJ46 135 aa21.14■□□□□ 0.97
PTPN11-207ENST00000639857 ECM2O94769 699 aaPredicted RBP21.14■□□□□ 0.97
PTPN11-207ENST00000639857 MAPK4P31152 587 aa21.14■□□□□ 0.97
PTPN11-207ENST00000639857 ERVK-9P63128 1117 aa21.14■□□□□ 0.97
PTPN11-207ENST00000639857 ERVK-24P63145 666 aa21.14■□□□□ 0.97
PTPN11-207ENST00000639857 B4GALNT3Q6L9W6 998 aa21.14■□□□□ 0.97
PTPN11-207ENST00000639857 SEC62Q99442 399 aaKnown RBP21.14■□□□□ 0.97
PTPN11-207ENST00000639857 RPAP3Q9H6T3 665 aaPredicted RBP21.14■□□□□ 0.97
PTPN11-207ENST00000639857 TXNRD2Q9NNW7 524 aa21.14■□□□□ 0.97
PTPN11-207ENST00000639857 RBPJLQ9UBG7 517 aa21.14■□□□□ 0.97
PTPN11-207ENST00000639857 POTEFA5A3E0 1075 aa21.13■□□□□ 0.97
PTPN11-207ENST00000639857 MINDY4BA8MYZ0 360 aa21.13■□□□□ 0.97
PTPN11-207ENST00000639857 RASA1P20936 1047 aa21.13■□□□□ 0.97
PTPN11-207ENST00000639857 UBXN2AP68543 259 aa21.13■□□□□ 0.97
PTPN11-207ENST00000639857 SIAH1Q8IUQ4 282 aa21.13■□□□□ 0.97
PTPN11-207ENST00000639857 SOCS4Q8WXH5 440 aa21.13■□□□□ 0.97
PTPN11-207ENST00000639857 NAPBQ9H115 298 aa21.13■□□□□ 0.97
PTPN11-207ENST00000639857 VCPKMTQ9H867 229 aa21.13■□□□□ 0.97
PTPN11-207ENST00000639857 MKNK2Q9HBH9 465 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms