RNA–Protein interactions for RNA: ENST00000638903.1

PAX6-243, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-243ENST00000638903 MED4Q9NPJ6 270 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 MYO1AQ9UBC5 1043 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 ITIH6Q6UXX5 1313 aa13.18□□□□□ -0.3
PAX6-243ENST00000638903 A0A087X0B3 334 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 PDE6AP16499 860 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 CASP1P29466 404 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 ERVK-24P63145 666 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 RTN1Q16799 776 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 NOM1Q5C9Z4 860 aaKnown RBP13.17□□□□□ -0.3
PAX6-243ENST00000638903 SMYD4Q8IYR2 804 aaPredicted RBP13.17□□□□□ -0.3
PAX6-243ENST00000638903 AIDAQ96BJ3 306 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 STRBPQ96SI9 672 aaKnown RBP13.17□□□□□ -0.3
PAX6-243ENST00000638903 ACBD3Q9H3P7 528 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 CABP5Q9NP86 173 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 LRP6O75581 1613 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 MST1RQ04912 1400 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 LRRIQ3A6PVS8 624 aaPredicted RBP13.17□□□□□ -0.3
PAX6-243ENST00000638903 DEXIO95424 95 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 CTDSPL2Q05D32 466 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 GOLGA6L1Q8N7Z2 621 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 EPSTI1Q96J88 318 aa13.17□□□□□ -0.3
PAX6-243ENST00000638903 MKRN1Q9UHC7 482 aaKnown RBP13.17□□□□□ -0.3
PAX6-243ENST00000638903 NID2Q14112 1375 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 CCT6AP40227 531 aaKnown RBP13.16□□□□□ -0.3
PAX6-243ENST00000638903 ARHGAP25P42331 645 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 TCIRG1Q13488 830 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 ALX1Q15699 326 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 WDR93Q6P2C0 686 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
PAX6-243ENST00000638903 PAGE5Q96GU1 130 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 ZNF512BQ96KM6 892 aaPredicted RBP13.16□□□□□ -0.3
PAX6-243ENST00000638903 GSDMAQ96QA5 445 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 NAPBQ9H115 298 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 ABHD10Q9NUJ1 306 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 AATFQ9NY61 560 aaKnown RBP eCLIP13.16□□□□□ -0.3
PAX6-243ENST00000638903 MYO6Q9UM54 1294 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 RIPOR2Q9Y4F9 1068 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 UBR2Q8IWV8 1755 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 PPP1R3GB7ZBB8 358 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 CSF1RP07333 972 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 NOP2P46087 812 aaKnown RBP13.16□□□□□ -0.3
PAX6-243ENST00000638903 AMPD2Q01433 879 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 NCAPH2Q6IBW4 605 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 LDHAL6AQ6ZMR3 332 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 SH3RF1Q7Z6J0 888 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 CRACR2BQ8N4Y2 399 aaPredicted RBP13.16□□□□□ -0.3
PAX6-243ENST00000638903 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 FAM204AQ9H8W3 233 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 COL18A1P39060 1754 aa13.16□□□□□ -0.3
PAX6-243ENST00000638903 ALS2Q96Q42 1657 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 TCRBV5S4A2TA0A5A2 114 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 CYP26C1Q6V0L0 522 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 IFNL3Q8IZI9 196 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 KRT23Q9C075 422 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 EPB41L4AQ9HCS5 686 aaPredicted RBP13.15□□□□□ -0.3
PAX6-243ENST00000638903 TACC3Q9Y6A5 838 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 PATL2C9JE40 543 aaKnown RBP13.15□□□□□ -0.3
PAX6-243ENST00000638903 N4BP3O15049 544 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 MAGEA9P43362 315 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 DPYDQ12882 1025 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 AKNAD1Q5T1N1 836 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 CTR9Q6PD62 1173 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 LRRC31Q6UY01 552 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 DHX37Q8IY37 1157 aaKnown RBP13.15□□□□□ -0.3
PAX6-243ENST00000638903 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 NUP88Q99567 741 aaPredicted RBP13.15□□□□□ -0.3
PAX6-243ENST00000638903 ZKSCAN3Q9BRR0 538 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 PLA2G12BQ9BX93 195 aa13.15□□□□□ -0.3
PAX6-243ENST00000638903 CCDC196A0A1B0GTZ2 297 aa13.14□□□□□ -0.31
PAX6-243ENST00000638903 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
PAX6-243ENST00000638903 EIF3CLB5ME19 914 aaKnown RBP13.14□□□□□ -0.31
PAX6-243ENST00000638903 RNF225M0QZC1 329 aaPredicted RBP13.14□□□□□ -0.31
PAX6-243ENST00000638903 PCCAP05165 728 aaPredicted RBP13.14□□□□□ -0.31
PAX6-243ENST00000638903 WTAPQ15007 396 aa13.14□□□□□ -0.31
PAX6-243ENST00000638903 SART3Q15020 963 aaKnown RBP13.14□□□□□ -0.31
PAX6-243ENST00000638903 KRT31Q15323 416 aa13.14□□□□□ -0.31
PAX6-243ENST00000638903 RRP12Q5JTH9 1297 aaKnown RBP13.14□□□□□ -0.31
PAX6-243ENST00000638903 MFSD6Q6ZSS7 791 aa13.14□□□□□ -0.31
PAX6-243ENST00000638903 SYMPKQ92797 1274 aaKnown RBP13.14□□□□□ -0.31
PAX6-243ENST00000638903 EIF3CQ99613 913 aaKnown RBP13.14□□□□□ -0.31
PAX6-243ENST00000638903 SLF1Q9BQI6 1058 aa13.14□□□□□ -0.31
PAX6-243ENST00000638903 CTNND2Q9UQB3 1225 aa13.14□□□□□ -0.31
PAX6-243ENST00000638903 CDC25AP30304 524 aa13.14□□□□□ -0.31
PAX6-243ENST00000638903 CHRNA2Q15822 529 aa13.14□□□□□ -0.31
PAX6-243ENST00000638903 VIPAS39Q9H9C1 493 aa13.14□□□□□ -0.31
PAX6-243ENST00000638903 TOMM22Q9NS69 142 aa13.14□□□□□ -0.31
PAX6-243ENST00000638903 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
PAX6-243ENST00000638903 FAM205CA6NFA0 338 aa13.13□□□□□ -0.31
PAX6-243ENST00000638903 LRRC10BA6NIK2 292 aa13.13□□□□□ -0.31
PAX6-243ENST00000638903 RNF40O75150 1001 aa13.13□□□□□ -0.31
PAX6-243ENST00000638903 PHKA1P46020 1223 aa13.13□□□□□ -0.31
PAX6-243ENST00000638903 TRIM28Q13263 835 aaKnown RBP13.13□□□□□ -0.31
PAX6-243ENST00000638903 ZBTB38Q8NAP3 1195 aaPredicted RBP13.13□□□□□ -0.31
PAX6-243ENST00000638903 TTLL11Q8NHH1 800 aa13.13□□□□□ -0.31
PAX6-243ENST00000638903 VPS16Q9H269 839 aa13.13□□□□□ -0.31
PAX6-243ENST00000638903 CNNM1Q9NRU3 951 aa13.13□□□□□ -0.31
PAX6-243ENST00000638903 LIMA1Q9UHB6 759 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms