RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 PPP1R1BQ9UD71 204 aaPredicted RBP11.49□□□□□ -0.57
ATM-226ENST00000638443 FOCADQ5VW36 1801 aa11.49□□□□□ -0.57
ATM-226ENST00000638443 SLC3A2P08195 630 aaKnown RBP11.48□□□□□ -0.57
ATM-226ENST00000638443 RASA1P20936 1047 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 UBE2HP62256 183 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 CDC42EP5Q6NZY7 148 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 PLCD4Q9BRC7 762 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 MKNK2Q9HBH9 465 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 CDKL5O76039 1030 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 FMNL1O95466 1100 aaPredicted RBP11.48□□□□□ -0.57
ATM-226ENST00000638443 PCP11498 1178 aaKnown RBP11.48□□□□□ -0.57
ATM-226ENST00000638443 IFNAR1P17181 557 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 CRKP46108 304 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 KIF23Q02241 960 aaPredicted RBP11.48□□□□□ -0.57
ATM-226ENST00000638443 KRT40Q6A162 431 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 CLEC10AQ8IUN9 316 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 ZFPM1Q8IX07 1006 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 SLF2Q8IX21 1173 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 PGBD1Q96JS3 809 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 ZSCAN16Q9H4T2 348 aaPredicted RBP11.48□□□□□ -0.57
ATM-226ENST00000638443 USP40Q9NVE5 1235 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 KCNJ14Q9UNX9 436 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 ZC3H4Q9UPT8 1303 aaKnown RBP11.48□□□□□ -0.57
ATM-226ENST00000638443 MYH1P12882 1939 aa11.48□□□□□ -0.57
ATM-226ENST00000638443 PSDA5PKW4 1024 aaPredicted RBP11.47□□□□□ -0.57
ATM-226ENST00000638443 TSPY3P0CV98 308 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 TSPY8P0CW00 308 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 PLCG2P16885 1265 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 LIG1P18858 919 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 CDK8P49336 464 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 SSRP1Q08945 709 aaKnown RBP11.47□□□□□ -0.57
ATM-226ENST00000638443 STRIP1Q5VSL9 837 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 CPLX2Q6PUV4 134 aaKnown RBP11.47□□□□□ -0.57
ATM-226ENST00000638443 AMOTL1Q8IY63 956 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 EXOC8Q8IYI6 725 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 PIBF1Q8WXW3 757 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 TEKT1Q969V4 418 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 MTA3Q9BTC8 594 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 XRCC6P12956 609 aaKnown RBP eCLIP11.47□□□□□ -0.57
ATM-226ENST00000638443 RBM5P52756 815 aaKnown RBP eCLIP11.47□□□□□ -0.57
ATM-226ENST00000638443 TCP10Q12799 353 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 C16orf86Q6ZW13 317 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 CATIPQ7Z7H3 387 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 TMTC2Q8N394 836 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 CRACR2BQ8N4Y2 399 aaPredicted RBP11.47□□□□□ -0.57
ATM-226ENST00000638443 SLC16A10Q8TF71 515 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 SUGT1Q9Y2Z0 365 aa11.47□□□□□ -0.57
ATM-226ENST00000638443 KIF13BQ9NQT8 1826 aa11.46□□□□□ -0.57
ATM-226ENST00000638443 STK36Q9NRP7 1315 aa11.46□□□□□ -0.57
ATM-226ENST00000638443 FAM196BA6NMK8 535 aa11.46□□□□□ -0.57
ATM-226ENST00000638443 RAD17O75943 681 aa11.46□□□□□ -0.57
ATM-226ENST00000638443 FUT2Q10981 343 aa11.46□□□□□ -0.57
ATM-226ENST00000638443 CCDC93Q567U6 631 aa11.46□□□□□ -0.57
ATM-226ENST00000638443 CNPY4Q8N129 248 aa11.46□□□□□ -0.57
ATM-226ENST00000638443 STX8Q9UNK0 236 aa11.46□□□□□ -0.57
ATM-226ENST00000638443 CLIC4Q9Y696 253 aa11.46□□□□□ -0.57
ATM-226ENST00000638443 ELP1O95163 1332 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 CNTNAP5Q8WYK1 1306 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 VEGFAP15692 232 aaPredicted RBP11.45□□□□□ -0.58
ATM-226ENST00000638443 ZNF445P59923 1031 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 SHROOM1Q2M3G4 852 aaPredicted RBP11.45□□□□□ -0.58
ATM-226ENST00000638443 STAG2Q8N3U4 1231 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 SCAND2PQ9GZW5 306 aaPredicted RBP11.45□□□□□ -0.58
ATM-226ENST00000638443 GRPEL1Q9HAV7 217 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 CARNS1A5YM72 827 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
ATM-226ENST00000638443 PKN1Q16512 942 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 MYSM1Q5VVJ2 828 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 HHIPL2Q6UWX4 724 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 ZNF444Q8N0Y2 327 aaPredicted RBP11.45□□□□□ -0.58
ATM-226ENST00000638443 SRBD1Q8N5C6 995 aaKnown RBP11.45□□□□□ -0.58
ATM-226ENST00000638443 PNMA1Q8ND90 353 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 OSBPL5Q9H0X9 879 aaPredicted RBP11.45□□□□□ -0.58
ATM-226ENST00000638443 CPVLQ9H3G5 476 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 VPS54Q9P1Q0 977 aa11.45□□□□□ -0.58
ATM-226ENST00000638443 ZBTB12Q9Y330 459 aaPredicted RBP11.45□□□□□ -0.58
ATM-226ENST00000638443 ANKRD62A6NC57 917 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 DDAH1O94760 285 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 RCAN1P53805 252 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 NR5A1Q13285 461 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 CSPP1Q1MSJ5 1256 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 SLC35G1Q2M3R5 365 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 TMTC3Q6ZXV5 915 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 TRIM22Q8IYM9 498 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 LARGE2Q8N3Y3 721 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 OXER1Q8TDS5 423 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 CEP95Q96GE4 821 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 ZDHHC15Q96MV8 337 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.44□□□□□ -0.58
ATM-226ENST00000638443 KAT14Q9H8E8 782 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 SIPA1L1O43166 1804 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 BTBD18B2RXH4 712 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 PSMD14O00487 310 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
ATM-226ENST00000638443 ADAMTS3O15072 1205 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 DEXIO95424 95 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 GOLGA8HP0CJ92 632 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 AKR1B1P15121 316 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 GABPAQ06546 454 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 KCNA1Q09470 495 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms