RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 CUL4BQ13620 913 aa22.89■■□□□ 1.25
SYNGAP1-227ENST00000638142 DESI2Q9BSY9 194 aa22.89■■□□□ 1.25
SYNGAP1-227ENST00000638142 PHF20Q9BVI0 1012 aa22.89■■□□□ 1.25
SYNGAP1-227ENST00000638142 SLAIN2Q9P270 581 aa22.89■■□□□ 1.25
SYNGAP1-227ENST00000638142 PPFIBP1Q86W92 1011 aa22.88■■□□□ 1.25
SYNGAP1-227ENST00000638142 GSDMAQ96QA5 445 aa22.88■■□□□ 1.25
SYNGAP1-227ENST00000638142 CDKAL1Q5VV42 579 aa22.88■■□□□ 1.25
SYNGAP1-227ENST00000638142 SUSD4Q5VX71 490 aa22.88■■□□□ 1.25
SYNGAP1-227ENST00000638142 CC2D1AQ6P1N0 951 aaPredicted RBP22.88■■□□□ 1.25
SYNGAP1-227ENST00000638142 PAGE5Q96GU1 130 aa22.88■■□□□ 1.25
SYNGAP1-227ENST00000638142 A0A087X0B3 334 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 PBX1P40424 430 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 PKN1Q16512 942 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 TEX35Q5T0J7 233 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 IGSF22Q8N9C0 903 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 GOLGA1Q92805 767 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 SHISA4Q96DD7 197 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 MRPL44Q9H9J2 332 aaKnown RBP22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 VPS54Q9P1Q0 977 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 ADD3Q9UEY8 706 aaKnown RBP22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 TEX33O43247 280 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 PRPF3O43395 683 aaKnown RBP22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 IGHMBP2P38935 993 aaKnown RBP22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 CCDC152Q4G0S7 254 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 CCDC12Q8WUD4 166 aaPredicted RBP22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 EPSTI1Q96J88 318 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 UBXN6Q9BZV1 441 aa22.87■■□□□ 1.25
SYNGAP1-227ENST00000638142 ERICH4A6NGS2 130 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 SEC31AO94979 1220 aaKnown RBP22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 CYP7A1P22680 504 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 KARSQ15046 597 aaKnown RBP22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 JAKMIP3Q5VZ66 844 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 SYMPKQ92797 1274 aaKnown RBP22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 ADGRG1Q9Y653 693 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 SOWAHDA6NJG2 315 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 DISP2A7MBM2 1401 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 MINDY4BA8MYZ0 360 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 TBC1D8O95759 1140 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 AFMP43652 599 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 FUT2Q10981 343 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 DPYDQ12882 1025 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 MTF1Q14872 753 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 FILIP1LQ4L180 1135 aa22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 RBM28Q9NW13 759 aaKnown RBP22.86■■□□□ 1.25
SYNGAP1-227ENST00000638142 FAM205CA6NFA0 338 aa22.85■■□□□ 1.25
SYNGAP1-227ENST00000638142 CD44P16070 742 aaKnown RBP22.85■■□□□ 1.25
SYNGAP1-227ENST00000638142 RBL2Q08999 1139 aa22.85■■□□□ 1.25
SYNGAP1-227ENST00000638142 BRMS1Q9HCU9 246 aa22.85■■□□□ 1.25
SYNGAP1-227ENST00000638142 ARFGAP3Q9NP61 516 aa22.85■■□□□ 1.25
SYNGAP1-227ENST00000638142 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.85■■□□□ 1.25
SYNGAP1-227ENST00000638142 KLHL10Q6JEL2 608 aa22.85■■□□□ 1.25
SYNGAP1-227ENST00000638142 ENAHQ8N8S7 591 aaPredicted RBP22.85■■□□□ 1.25
SYNGAP1-227ENST00000638142 ZSCAN10Q96SZ4 725 aaPredicted RBP22.85■■□□□ 1.25
SYNGAP1-227ENST00000638142 MAGEB6P1A0A0J9YX57 407 aa22.84■■□□□ 1.25
SYNGAP1-227ENST00000638142 CATIPQ7Z7H3 387 aa22.84■■□□□ 1.25
SYNGAP1-227ENST00000638142 SDR42E1Q8WUS8 393 aa22.84■■□□□ 1.25
SYNGAP1-227ENST00000638142 CCDC51Q96ER9 411 aa22.84■■□□□ 1.25
SYNGAP1-227ENST00000638142 EPC1Q9H2F5 836 aa22.84■■□□□ 1.25
SYNGAP1-227ENST00000638142 MFAP3LO75121 409 aa22.84■■□□□ 1.25
SYNGAP1-227ENST00000638142 EIF5P55010 431 aaKnown RBP22.84■■□□□ 1.25
SYNGAP1-227ENST00000638142 EARS2Q5JPH6 523 aaKnown RBP22.84■■□□□ 1.25
SYNGAP1-227ENST00000638142 RAD9BQ6WBX8 426 aa22.84■■□□□ 1.25
SYNGAP1-227ENST00000638142 CNGA4Q8IV77 575 aa22.84■■□□□ 1.25
SYNGAP1-227ENST00000638142 PARD6BQ9BYG5 372 aa22.84■■□□□ 1.25
SYNGAP1-227ENST00000638142 ITIH6Q6UXX5 1313 aa22.83■■□□□ 1.25
SYNGAP1-227ENST00000638142 PPP1R3GB7ZBB8 358 aa22.83■■□□□ 1.25
SYNGAP1-227ENST00000638142 KIF5CO60282 957 aa22.83■■□□□ 1.25
SYNGAP1-227ENST00000638142 CALM1P0DP23 149 aa22.83■■□□□ 1.25
SYNGAP1-227ENST00000638142 CALM2P0DP24 149 aa22.83■■□□□ 1.25
SYNGAP1-227ENST00000638142 CALM3P0DP25 149 aa22.83■■□□□ 1.25
SYNGAP1-227ENST00000638142 TXLNAP40222 546 aa22.83■■□□□ 1.25
SYNGAP1-227ENST00000638142 STX17P56962 302 aa22.83■■□□□ 1.25
SYNGAP1-227ENST00000638142 PARP10Q53GL7 1025 aa22.83■■□□□ 1.25
SYNGAP1-227ENST00000638142 BCL9LQ86UU0 1499 aa22.83■■□□□ 1.25
SYNGAP1-227ENST00000638142 COL22A1Q8NFW1 1626 aaPredicted RBP22.83■■□□□ 1.25
SYNGAP1-227ENST00000638142 TUBB2AQ13885 445 aa22.83■■□□□ 1.24
SYNGAP1-227ENST00000638142 IFIT1BQ5T764 474 aaKnown RBP22.83■■□□□ 1.24
SYNGAP1-227ENST00000638142 RASGRP2Q7LDG7 609 aa22.83■■□□□ 1.24
SYNGAP1-227ENST00000638142 ADGRA1Q86SQ6 560 aa22.83■■□□□ 1.24
SYNGAP1-227ENST00000638142 TUBB2BQ9BVA1 445 aa22.83■■□□□ 1.24
SYNGAP1-227ENST00000638142 DUOX1Q9NRD9 1551 aa22.82■■□□□ 1.24
SYNGAP1-227ENST00000638142 SASH3O75995 380 aa22.82■■□□□ 1.24
SYNGAP1-227ENST00000638142 PCP11498 1178 aaKnown RBP22.82■■□□□ 1.24
SYNGAP1-227ENST00000638142 FECHP22830 423 aa22.82■■□□□ 1.24
SYNGAP1-227ENST00000638142 TNFRSF25Q93038 417 aa22.82■■□□□ 1.24
SYNGAP1-227ENST00000638142 V9GY48 417 aaPredicted RBP22.82■■□□□ 1.24
SYNGAP1-227ENST00000638142 CHRNDQ07001 517 aa22.82■■□□□ 1.24
SYNGAP1-227ENST00000638142 LZTFL1Q9NQ48 299 aa22.82■■□□□ 1.24
SYNGAP1-227ENST00000638142 BTG4Q9NY30 223 aa22.82■■□□□ 1.24
SYNGAP1-227ENST00000638142 ZNF804BA4D1E1 1349 aa22.81■■□□□ 1.24
SYNGAP1-227ENST00000638142 CCDC151A5D8V7 595 aa22.81■■□□□ 1.24
SYNGAP1-227ENST00000638142 TTC38Q5R3I4 469 aa22.81■■□□□ 1.24
SYNGAP1-227ENST00000638142 SRGAP1Q7Z6B7 1085 aa22.81■■□□□ 1.24
SYNGAP1-227ENST00000638142 IQCA1Q86XH1 822 aa22.81■■□□□ 1.24
SYNGAP1-227ENST00000638142 PYM1Q9BRP8 204 aaKnown RBP22.81■■□□□ 1.24
SYNGAP1-227ENST00000638142 PRDM1O75626 825 aa22.81■■□□□ 1.24
SYNGAP1-227ENST00000638142 ATP2C1P98194 919 aaPredicted RBP22.81■■□□□ 1.24
SYNGAP1-227ENST00000638142 RIOK1Q9BRS2 568 aaKnown RBP22.81■■□□□ 1.24
SYNGAP1-227ENST00000638142 IRX2Q9BZI1 471 aaPredicted RBP22.81■■□□□ 1.24
SYNGAP1-227ENST00000638142 DDAH1O94760 285 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms