RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ISM2Q6H9L7 571 aa24.72■■□□□ 1.55
CLN6-224ENST00000638076 CNNM3Q8NE01 707 aa24.72■■□□□ 1.55
CLN6-224ENST00000638076 GGA1Q9UJY5 639 aa24.72■■□□□ 1.55
CLN6-224ENST00000638076 CEP131Q9UPN4 1083 aa24.72■■□□□ 1.55
CLN6-224ENST00000638076 CCDC144BQ3MJ40 725 aa24.71■■□□□ 1.55
CLN6-224ENST00000638076 KRBA2Q6ZNG9 492 aa24.71■■□□□ 1.55
CLN6-224ENST00000638076 DYNLL2Q96FJ2 89 aa24.71■■□□□ 1.55
CLN6-224ENST00000638076 NOL10Q9BSC4 688 aaKnown RBP24.71■■□□□ 1.55
CLN6-224ENST00000638076 FAM205CA6NFA0 338 aa24.7■■□□□ 1.55
CLN6-224ENST00000638076 TRIM37O94972 964 aa24.7■■□□□ 1.55
CLN6-224ENST00000638076 TFAP4Q01664 338 aa24.7■■□□□ 1.55
CLN6-224ENST00000638076 LRMPQ12912 555 aa24.7■■□□□ 1.55
CLN6-224ENST00000638076 RCSD1Q6JBY9 416 aa24.7■■□□□ 1.55
CLN6-224ENST00000638076 METTL16Q86W50 562 aaKnown RBP24.7■■□□□ 1.55
CLN6-224ENST00000638076 PPP4CP60510 307 aa24.7■■□□□ 1.54
CLN6-224ENST00000638076 TGFBRAP1Q8WUH2 860 aa24.7■■□□□ 1.54
CLN6-224ENST00000638076 FAM13BQ9NYF5 915 aa24.7■■□□□ 1.54
CLN6-224ENST00000638076 LDHCP07864 332 aa24.69■■□□□ 1.54
CLN6-224ENST00000638076 DDR1Q08345 913 aa24.69■■□□□ 1.54
CLN6-224ENST00000638076 EARS2Q5JPH6 523 aaKnown RBP24.69■■□□□ 1.54
CLN6-224ENST00000638076 SRPRBQ9Y5M8 271 aaKnown RBP24.69■■□□□ 1.54
CLN6-224ENST00000638076 BBOX1O75936 387 aa24.68■■□□□ 1.54
CLN6-224ENST00000638076 AMOTL1Q8IY63 956 aa24.68■■□□□ 1.54
CLN6-224ENST00000638076 BRMS1Q9HCU9 246 aa24.68■■□□□ 1.54
CLN6-224ENST00000638076 IL17RBQ9NRM6 502 aa24.68■■□□□ 1.54
CLN6-224ENST00000638076 IL1R1P14778 569 aa24.68■■□□□ 1.54
CLN6-224ENST00000638076 KRT27Q7Z3Y8 459 aa24.68■■□□□ 1.54
CLN6-224ENST00000638076 ZNF579Q8NAF0 562 aaKnown RBP24.68■■□□□ 1.54
CLN6-224ENST00000638076 RTFDC1Q9BY42 306 aaPredicted RBP24.68■■□□□ 1.54
CLN6-224ENST00000638076 KAT14Q9H8E8 782 aa24.68■■□□□ 1.54
CLN6-224ENST00000638076 MKNK2Q9HBH9 465 aa24.68■■□□□ 1.54
CLN6-224ENST00000638076 TRIM75PA6NK02 468 aa24.67■■□□□ 1.54
CLN6-224ENST00000638076 POLRMTO00411 1230 aaKnown RBP24.67■■□□□ 1.54
CLN6-224ENST00000638076 ROBO3Q96MS0 1386 aa24.67■■□□□ 1.54
CLN6-224ENST00000638076 NPY5RQ15761 445 aa24.67■■□□□ 1.54
CLN6-224ENST00000638076 DGKHQ86XP1 1220 aa24.67■■□□□ 1.54
CLN6-224ENST00000638076 FOXP4Q8IVH2 680 aaPredicted RBP24.67■■□□□ 1.54
CLN6-224ENST00000638076 CACTINQ8WUQ7 758 aaKnown RBP24.67■■□□□ 1.54
CLN6-224ENST00000638076 POLLQ9UGP5 575 aa24.67■■□□□ 1.54
CLN6-224ENST00000638076 SMTNL1A8MU46 457 aa24.66■■□□□ 1.54
CLN6-224ENST00000638076 HOXA10P31260 410 aaPredicted RBP24.66■■□□□ 1.54
CLN6-224ENST00000638076 NCAPHQ15003 741 aa24.66■■□□□ 1.54
CLN6-224ENST00000638076 MAPKAPK5Q8IW41 473 aa24.66■■□□□ 1.54
CLN6-224ENST00000638076 PODXL2Q9NZ53 605 aa24.66■■□□□ 1.54
CLN6-224ENST00000638076 FOXN1O15353 648 aa24.66■■□□□ 1.54
CLN6-224ENST00000638076 POLR2DO15514 142 aaKnown RBP24.66■■□□□ 1.54
CLN6-224ENST00000638076 KIF5BP33176 963 aa24.66■■□□□ 1.54
CLN6-224ENST00000638076 BTDP43251 543 aa24.66■■□□□ 1.54
CLN6-224ENST00000638076 NT5C2P49902 561 aa24.66■■□□□ 1.54
CLN6-224ENST00000638076 ELOA2Q8IYF1 753 aaPredicted RBP24.66■■□□□ 1.54
CLN6-224ENST00000638076 TBC1D16Q8TBP0 767 aa24.66■■□□□ 1.54
CLN6-224ENST00000638076 CSRNP2Q9H175 543 aa24.66■■□□□ 1.54
CLN6-224ENST00000638076 PCDHA5Q9Y5H7 936 aa24.66■■□□□ 1.54
CLN6-224ENST00000638076 SCG2P13521 617 aa24.65■■□□□ 1.54
CLN6-224ENST00000638076 PLCD1P51178 756 aa24.65■■□□□ 1.54
CLN6-224ENST00000638076 TPM4P67936 248 aa24.65■■□□□ 1.54
CLN6-224ENST00000638076 MDM2Q00987 491 aaPredicted RBP24.65■■□□□ 1.54
CLN6-224ENST00000638076 TNFRSF25Q93038 417 aa24.65■■□□□ 1.54
CLN6-224ENST00000638076 SAP30BPQ9UHR5 308 aaKnown RBP24.65■■□□□ 1.54
CLN6-224ENST00000638076 PNMA1Q8ND90 353 aa24.64■■□□□ 1.54
CLN6-224ENST00000638076 HOOK1Q9UJC3 728 aaKnown RBP24.64■■□□□ 1.54
CLN6-224ENST00000638076 IKBKBO14920 756 aa24.64■■□□□ 1.53
CLN6-224ENST00000638076 TSPY3P0CV98 308 aa24.64■■□□□ 1.53
CLN6-224ENST00000638076 TSPY8P0CW00 308 aa24.64■■□□□ 1.53
CLN6-224ENST00000638076 PFKFB3Q16875 520 aaPredicted RBP24.64■■□□□ 1.53
CLN6-224ENST00000638076 NOM1Q5C9Z4 860 aaKnown RBP24.64■■□□□ 1.53
CLN6-224ENST00000638076 SLC44A5Q8NCS7 719 aa24.64■■□□□ 1.53
CLN6-224ENST00000638076 USP17L3A6NCW0 530 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 USP17L4A6NCW7 530 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 MFSD14BQ5SR56 506 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 USP17L1Q7RTZ2 530 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 ZNF444Q8N0Y2 327 aaPredicted RBP24.63■■□□□ 1.53
CLN6-224ENST00000638076 CRAMP1Q96RY5 1269 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 SERTAD1Q9UHV2 236 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 MORC2Q9Y6X9 1032 aaPredicted RBP24.63■■□□□ 1.53
CLN6-224ENST00000638076 UQCRHLA0A096LP55 91 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 WNT7AO00755 349 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 UQCRHP07919 91 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 VEGFAP15692 232 aaPredicted RBP24.63■■□□□ 1.53
CLN6-224ENST00000638076 TXNRD1Q16881 649 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 USP49Q70CQ1 688 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 FILIP1Q7Z7B0 1213 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 CERS3Q8IU89 383 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 LRRC8AQ8IWT6 810 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 PROM2Q8N271 834 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 ANKS1AQ92625 1134 aa24.63■■□□□ 1.53
CLN6-224ENST00000638076 NAV1Q8NEY1 1877 aa24.62■■□□□ 1.53
CLN6-224ENST00000638076 GPR75-ASB3A0A0A6YYF3 556 aa24.62■■□□□ 1.53
CLN6-224ENST00000638076 C6orf229H3BNL8 230 aa24.62■■□□□ 1.53
CLN6-224ENST00000638076 NLRP5P59047 1200 aa24.62■■□□□ 1.53
CLN6-224ENST00000638076 ARID5BQ14865 1188 aa24.62■■□□□ 1.53
CLN6-224ENST00000638076 POSTNQ15063 836 aa24.62■■□□□ 1.53
CLN6-224ENST00000638076 PDILTQ8N807 584 aa24.62■■□□□ 1.53
CLN6-224ENST00000638076 KLRG2A4D1S0 409 aaPredicted RBP24.62■■□□□ 1.53
CLN6-224ENST00000638076 XPO4Q9C0E2 1151 aaKnown RBP24.62■■□□□ 1.53
CLN6-224ENST00000638076 IFNKQ9P0W0 207 aa24.62■■□□□ 1.53
CLN6-224ENST00000638076 SMC2O95347 1197 aa24.61■■□□□ 1.53
CLN6-224ENST00000638076 CCDC178Q5BJE1 867 aa24.61■■□□□ 1.53
CLN6-224ENST00000638076 OLFM4Q6UX06 510 aa24.61■■□□□ 1.53
CLN6-224ENST00000638076 TCP11L1Q9NUJ3 509 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms