RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 VAC14Q08AM6 782 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 STX1AQ16623 288 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 KRT79Q5XKE5 535 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 TTC14Q96N46 770 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 NAP1L5Q96NT1 182 aaPredicted RBP6.29□□□□□ -1.4
CHD2-227ENST00000637572 SERPINB13Q9UIV8 391 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 LIFRP42702 1097 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 MCAMP43121 646 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 USP14P54578 494 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 PTH1RQ03431 593 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 CTDSPL2Q05D32 466 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 SYCP1Q15431 976 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 CHST3Q7LGC8 479 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 ATG9AQ7Z3C6 839 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 POTEDQ86YR6 584 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 KANSL2Q9H9L4 492 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 NDUFB9Q9Y6M9 179 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 ZMYM6O95789 1325 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 UVSSAQ2YD98 709 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 ASPRV1Q53RT3 343 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 RNF214Q8ND24 703 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 TFIP11Q9UBB9 837 aaKnown RBP6.28□□□□□ -1.4
CHD2-227ENST00000637572 LIMD1Q9UGP4 676 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 PIK3C2AO00443 1686 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 TNKSO95271 1327 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 PNPLA7Q6ZV29 1317 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 USP17L8P0C7I0 530 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 PLCD1P51178 756 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 FOXK1P85037 733 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 MECOMQ03112 1051 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 DTHD1Q6ZMT9 781 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 USP37Q86T82 979 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 FANCBQ8NB91 859 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 STRBPQ96SI9 672 aaKnown RBP6.28□□□□□ -1.4
CHD2-227ENST00000637572 USP25Q9UHP3 1055 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 NALCNQ8IZF0 1738 aa6.28□□□□□ -1.4
CHD2-227ENST00000637572 COL14A1Q05707 1796 aaKnown RBP6.27□□□□□ -1.4
CHD2-227ENST00000637572 PRDM1O75626 825 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 MLLT1Q03111 559 aaPredicted RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 SPAG1Q07617 926 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 RAB11FIP4Q86YS3 637 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 PNMA1Q8ND90 353 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 OSBP2Q969R2 916 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 GRPEL1Q9HAV7 217 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 SPDYE5A6NIY4 337 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 ADCY7P51828 1080 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 ICA1Q05084 483 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 CETN1Q12798 172 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 ABCB5Q2M3G0 1257 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 STRIP1Q5VSL9 837 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 DGKHQ86XP1 1220 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 IQUBQ8NA54 791 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 SDR42E1Q8WUS8 393 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 ZKSCAN3Q9BRR0 538 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 DBNDD1Q9H9R9 158 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 KCNG1Q9UIX4 513 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 V9GY48 417 aaPredicted RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 C21orf2O43822 256 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 TBCAO75347 108 aaKnown RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 CYP21A2P08686 494 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 HSPA1AP0DMV8 641 aaKnown RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 HSPA1BP0DMV9 641 aaKnown RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 TCP10Q12799 353 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 NONOQ15233 471 aaKnown RBP eCLIP6.27□□□□□ -1.41
CHD2-227ENST00000637572 FKBP15Q5T1M5 1219 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 HAUS3Q68CZ6 603 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 ZNF397Q8NF99 534 aaPredicted RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 FERMT2Q96AC1 680 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 FAM84BQ96KN1 310 aaPredicted RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 SEC62Q99442 399 aaKnown RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 RNF26Q9BY78 433 aaPredicted RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 VPS33BQ9H267 617 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 PIH1D3Q9NQM4 214 aaKnown RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 CLIP2Q9UDT6 1046 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 TTLL1O95922 423 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 GYS1P13807 737 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 STAT6P42226 847 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 RFX5P48382 616 aaPredicted RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 SCNN1DP51172 638 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 TGFB2P61812 414 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 NECTIN1Q15223 517 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 QPCTQ16769 361 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 GLIPR1L2Q4G1C9 344 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 MCF2L2Q86YR7 1114 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 PDILTQ8N807 584 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 ANTXR1Q9H6X2 564 aa6.27□□□□□ -1.41
CHD2-227ENST00000637572 ARIH1Q9Y4X5 557 aaPredicted RBP6.27□□□□□ -1.41
CHD2-227ENST00000637572 YEATS4O95619 227 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 FOSP01100 380 aaPredicted RBP6.26□□□□□ -1.41
CHD2-227ENST00000637572 CYP2E1P05181 493 aaPredicted RBP6.26□□□□□ -1.41
CHD2-227ENST00000637572 DIS3L2Q8IYB7 885 aaKnown RBP6.26□□□□□ -1.41
CHD2-227ENST00000637572 FAM177A1Q8N128 213 aaPredicted RBP6.26□□□□□ -1.41
CHD2-227ENST00000637572 SYNE4Q8N205 404 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 STAG1Q8WVM7 1258 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 CSRNP1Q96S65 589 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 TANGO6Q9C0B7 1094 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 SLC5A4Q9NY91 659 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 MRPL11Q9Y3B7 192 aaKnown RBP6.26□□□□□ -1.41
CHD2-227ENST00000637572 SAMM50Q9Y512 469 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 PDE4DIPQ5VU43 2346 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms