RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 RTEL1Q9NZ71 1219 aa25.08■■□□□ 1.61
CHRNA7-228ENST00000637519 PPP1R1BQ9UD71 204 aaPredicted RBP25.08■■□□□ 1.61
CHRNA7-228ENST00000637519 NR1I2O75469 434 aa25.08■■□□□ 1.6
CHRNA7-228ENST00000637519 TCP10Q12799 353 aa25.08■■□□□ 1.6
CHRNA7-228ENST00000637519 PPP2R5BQ15173 497 aa25.08■■□□□ 1.6
CHRNA7-228ENST00000637519 CAMK4Q16566 473 aa25.08■■□□□ 1.6
CHRNA7-228ENST00000637519 DIS3L2Q8IYB7 885 aaKnown RBP25.08■■□□□ 1.6
CHRNA7-228ENST00000637519 STAG2Q8N3U4 1231 aa25.08■■□□□ 1.6
CHRNA7-228ENST00000637519 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.08■■□□□ 1.6
CHRNA7-228ENST00000637519 UTRNP46939 3433 aa25.07■■□□□ 1.6
CHRNA7-228ENST00000637519 ME1P48163 572 aa25.07■■□□□ 1.6
CHRNA7-228ENST00000637519 AKAP17AQ02040 695 aaKnown RBP25.07■■□□□ 1.6
CHRNA7-228ENST00000637519 ATL3Q6DD88 541 aa25.07■■□□□ 1.6
CHRNA7-228ENST00000637519 OXER1Q8TDS5 423 aa25.07■■□□□ 1.6
CHRNA7-228ENST00000637519 TMEM47Q9BQJ4 181 aa25.07■■□□□ 1.6
CHRNA7-228ENST00000637519 GOLPH3LQ9H4A5 285 aa25.07■■□□□ 1.6
CHRNA7-228ENST00000637519 ZNF287Q9HBT7 754 aa25.07■■□□□ 1.6
CHRNA7-228ENST00000637519 RAD17O75943 681 aa25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 FKBP1AP62942 108 aaKnown RBP25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 GABPAQ06546 454 aa25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 NR5A1Q13285 461 aa25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 R3HDM1Q15032 1099 aaKnown RBP25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 CLEC10AQ8IUN9 316 aa25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 LINC00301Q8NCQ3 95 aa25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 CEP95Q96GE4 821 aa25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 TCP11L1Q9NUJ3 509 aa25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 VEGFAP15692 232 aaPredicted RBP25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 U2AF2P26368 475 aaKnown RBP eCLIP25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 STK38Q15208 465 aa25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 RNF214Q8ND24 703 aa25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 ANKS1AQ92625 1134 aa25.06■■□□□ 1.6
CHRNA7-228ENST00000637519 MYH6P13533 1939 aa25.05■■□□□ 1.6
CHRNA7-228ENST00000637519 KIF13BQ9NQT8 1826 aa25.05■■□□□ 1.6
CHRNA7-228ENST00000637519 PRPF3O43395 683 aaKnown RBP25.05■■□□□ 1.6
CHRNA7-228ENST00000637519 RTKN2Q8IZC4 609 aa25.05■■□□□ 1.6
CHRNA7-228ENST00000637519 LARGE2Q8N3Y3 721 aa25.05■■□□□ 1.6
CHRNA7-228ENST00000637519 NEDD1Q8NHV4 660 aa25.05■■□□□ 1.6
CHRNA7-228ENST00000637519 POLR3EQ9NVU0 708 aa25.05■■□□□ 1.6
CHRNA7-228ENST00000637519 PCDHA7Q9UN72 937 aa25.05■■□□□ 1.6
CHRNA7-228ENST00000637519 ANO1Q5XXA6 986 aa25.05■■□□□ 1.6
CHRNA7-228ENST00000637519 KLHL34Q8N239 644 aa25.05■■□□□ 1.6
CHRNA7-228ENST00000637519 BAZ2BQ9UIF8 2168 aaKnown RBP25.04■■□□□ 1.6
CHRNA7-228ENST00000637519 AKR1B1P15121 316 aa25.04■■□□□ 1.6
CHRNA7-228ENST00000637519 CCAR1Q8IX12 1150 aaKnown RBP25.04■■□□□ 1.6
CHRNA7-228ENST00000637519 RGS22Q8NE09 1264 aa25.04■■□□□ 1.6
CHRNA7-228ENST00000637519 PSMD1Q99460 953 aa25.04■■□□□ 1.6
CHRNA7-228ENST00000637519 TSPY26PQ9H489 355 aa25.04■■□□□ 1.6
CHRNA7-228ENST00000637519 FAM196BA6NMK8 535 aa25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 GOLGA8HP0CJ92 632 aa25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 NASPP49321 788 aaPredicted RBP25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 EIF6P56537 245 aaKnown RBP25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 SF3A1Q15459 793 aaKnown RBP25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 CCDC125Q86Z20 511 aa25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 NOSTRINQ8IVI9 506 aa25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 MAD2L2Q9UI95 211 aa25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 SERPINB13Q9UIV8 391 aa25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 SLC35G1Q2M3R5 365 aa25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 MTFR1LQ9H019 292 aa25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 NUP62CLQ9H1M0 184 aa25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 FAM198AQ9UFP1 575 aa25.03■■□□□ 1.6
CHRNA7-228ENST00000637519 SAFBQ15424 915 aaKnown RBP eCLIP25.02■■□□□ 1.6
CHRNA7-228ENST00000637519 CPVLQ9H3G5 476 aa25.02■■□□□ 1.6
CHRNA7-228ENST00000637519 TDRD3Q9H7E2 651 aaKnown RBP25.02■■□□□ 1.6
CHRNA7-228ENST00000637519 ZBTB12Q9Y330 459 aaPredicted RBP25.02■■□□□ 1.6
CHRNA7-228ENST00000637519 DDTLA6NHG4 134 aaPredicted RBP25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 PSMD14O00487 310 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 SPTLC2O15270 562 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 MARCKSP29966 332 aaPredicted RBP25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 NT5C2P49902 561 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 GRM4Q14833 912 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 CFAP100Q494V2 611 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 SERPINA10Q9UK55 444 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 FAM205CA6NFA0 338 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 YEATS4O95619 227 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 POLD1P28340 1107 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 KIF5BP33176 963 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 SHMT1P34896 483 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 CKAP2LQ8IYA6 745 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 DNAJC18Q9H819 358 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 PIM2Q9P1W9 311 aa25.01■■□□□ 1.59
CHRNA7-228ENST00000637519 HDLBPQ00341 1268 aaKnown RBP25■■□□□ 1.59
CHRNA7-228ENST00000637519 CCDC178Q5BJE1 867 aa25■■□□□ 1.59
CHRNA7-228ENST00000637519 SH3BP5LQ7L8J4 393 aa25■■□□□ 1.59
CHRNA7-228ENST00000637519 FSIP1Q8NA03 581 aa25■■□□□ 1.59
CHRNA7-228ENST00000637519 MAP3K14Q99558 947 aa25■■□□□ 1.59
CHRNA7-228ENST00000637519 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25■■□□□ 1.59
CHRNA7-228ENST00000637519 TOB1P50616 345 aaPredicted RBP25■■□□□ 1.59
CHRNA7-228ENST00000637519 SHROOM1Q2M3G4 852 aaPredicted RBP25■■□□□ 1.59
CHRNA7-228ENST00000637519 PRMT6Q96LA8 375 aaPredicted RBP25■■□□□ 1.59
CHRNA7-228ENST00000637519 PHF20Q9BVI0 1012 aa25■■□□□ 1.59
CHRNA7-228ENST00000637519 MRIQ9BWK5 157 aa25■■□□□ 1.59
CHRNA7-228ENST00000637519 PSDA5PKW4 1024 aaPredicted RBP24.99■■□□□ 1.59
CHRNA7-228ENST00000637519 ADAMTS3O15072 1205 aa24.99■■□□□ 1.59
CHRNA7-228ENST00000637519 HLA-DOAP06340 250 aa24.99■■□□□ 1.59
CHRNA7-228ENST00000637519 NOM1Q5C9Z4 860 aaKnown RBP24.99■■□□□ 1.59
CHRNA7-228ENST00000637519 EARS2Q5JPH6 523 aaKnown RBP24.99■■□□□ 1.59
CHRNA7-228ENST00000637519 LRRC47Q8N1G4 583 aaKnown RBP24.99■■□□□ 1.59
CHRNA7-228ENST00000637519 KCNG4Q8TDN1 519 aa24.99■■□□□ 1.59
CHRNA7-228ENST00000637519 DDX19AQ9NUU7 478 aaKnown RBP24.99■■□□□ 1.59
CHRNA7-228ENST00000637519 SIPA1L1O43166 1804 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms