RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 BCO2Q9BYV7 579 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 CWC22Q9HCG8 908 aaKnown RBP3.16□□□□□ -1.9
SCN1A-215ENST00000637285 NLRP2Q9NX02 1062 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 CACNA2D2Q9NY47 1150 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 SAMM50Q9Y512 469 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 FITM1A5D6W6 292 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 TMEM88BA6NKF7 163 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 SLC22A31A6NKX4 558 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 H3BRB1 525 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 PAGE1O75459 146 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 BMP6P22004 513 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 ETF1P62495 437 aaKnown RBP3.15□□□□□ -1.91
SCN1A-215ENST00000637285 SRSF3P84103 164 aaKnown RBP3.15□□□□□ -1.91
SCN1A-215ENST00000637285 KRTAP1-1Q07627 177 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 PRAMEF13Q5VWM6 474 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 LRFN4Q6PJG9 635 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 GLYCTKQ8IVS8 523 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 SIRT2Q8IXJ6 389 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 PPP1R13LQ8WUF5 828 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 SYTL4Q96C24 671 aaPredicted RBP3.15□□□□□ -1.91
SCN1A-215ENST00000637285 CCDC97Q96F63 343 aaPredicted RBP3.15□□□□□ -1.91
SCN1A-215ENST00000637285 NECAB3Q96P71 396 aaPredicted RBP3.15□□□□□ -1.91
SCN1A-215ENST00000637285 FAM129BQ96TA1 746 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 BDH2Q9BUT1 245 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 TUT1Q9H6E5 874 aaKnown RBP3.15□□□□□ -1.91
SCN1A-215ENST00000637285 SIRT5Q9NXA8 310 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 DUSP13Q9UII6 198 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 ADAMTS20P59510 1910 aa3.15□□□□□ -1.91
SCN1A-215ENST00000637285 GPR182O15218 404 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 AKAP8O43823 692 aaKnown RBP3.14□□□□□ -1.91
SCN1A-215ENST00000637285 ICMTO60725 284 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 LTKP29376 864 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 EPHB3P54753 998 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 EFEMP1Q12805 493 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 ADGRF1Q5T601 910 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 PHLDB3Q6NSJ2 640 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 NXPE4Q6UWF7 544 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 HDXQ7Z353 690 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 SPPL2CQ8IUH8 684 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 HID1Q8IV36 788 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 SP8Q8IXZ3 490 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 PIWIL2Q8TC59 973 aaKnown RBP3.14□□□□□ -1.91
SCN1A-215ENST00000637285 DHX38Q92620 1227 aaKnown RBP3.14□□□□□ -1.91
SCN1A-215ENST00000637285 PLPPR2Q96GM1 343 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 TEPSINQ96N21 525 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 WNT10AQ9GZT5 417 aa3.14□□□□□ -1.91
SCN1A-215ENST00000637285 DUSP15Q9H1R2 295 aaPredicted RBP3.14□□□□□ -1.91
SCN1A-215ENST00000637285 TRIT1Q9H3H1 467 aaKnown RBP3.14□□□□□ -1.91
SCN1A-215ENST00000637285 ZC3H12DA2A288 527 aaKnown RBP3.13□□□□□ -1.91
SCN1A-215ENST00000637285 CARNS1A5YM72 827 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 OR14I1A6ND48 311 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 ENC1O14682 589 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 FBXO24O75426 580 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 CST3P01034 146 aaPredicted RBP3.13□□□□□ -1.91
SCN1A-215ENST00000637285 IGHA2P01877 340 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 CAP2P40123 477 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 LRRC14Q15048 493 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 NR0B2Q15466 257 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 GAB4Q2WGN9 574 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 RASIP1Q5U651 963 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 COX4I2Q96KJ9 171 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 GPATCH2Q9NW75 528 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 MBD1Q9UIS9 605 aaPredicted RBP3.13□□□□□ -1.91
SCN1A-215ENST00000637285 MYRFQ9Y2G1 1151 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 PCDHA11Q9Y5I1 949 aa3.13□□□□□ -1.91
SCN1A-215ENST00000637285 ARHGAP4P98171 946 aa3.12□□□□□ -1.91
SCN1A-215ENST00000637285 PTPN11Q06124 597 aaPredicted RBP3.12□□□□□ -1.91
SCN1A-215ENST00000637285 SNX17Q15036 470 aa3.12□□□□□ -1.91
SCN1A-215ENST00000637285 WIPI1Q5MNZ9 446 aaPredicted RBP3.12□□□□□ -1.91
SCN1A-215ENST00000637285 CNKSR3Q6P9H4 555 aa3.12□□□□□ -1.91
SCN1A-215ENST00000637285 HHIPL2Q6UWX4 724 aa3.12□□□□□ -1.91
SCN1A-215ENST00000637285 CRELD1Q96HD1 420 aa3.12□□□□□ -1.91
SCN1A-215ENST00000637285 Q96M66 194 aa3.12□□□□□ -1.91
SCN1A-215ENST00000637285 DPH2Q9BQC3 489 aaPredicted RBP3.12□□□□□ -1.91
SCN1A-215ENST00000637285 CEP44Q9C0F1 390 aa3.12□□□□□ -1.91
SCN1A-215ENST00000637285 EPB41L4AQ9HCS5 686 aaPredicted RBP3.12□□□□□ -1.91
SCN1A-215ENST00000637285 OVOL3O00110 214 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 N4BP3O15049 544 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 PRICKLE3O43900 615 aaPredicted RBP3.11□□□□□ -1.91
SCN1A-215ENST00000637285 GRK4P32298 578 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 ETV3P41162 512 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 SERPINB4P48594 390 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 CDK8P49336 464 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 ZXDAP98168 799 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 CHRNEQ04844 493 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 RTP5Q14D33 572 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.11□□□□□ -1.91
SCN1A-215ENST00000637285 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.11□□□□□ -1.91
SCN1A-215ENST00000637285 FRMD5Q7Z6J6 570 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 TSPYL5Q86VY4 417 aaPredicted RBP3.11□□□□□ -1.91
SCN1A-215ENST00000637285 SHISA4Q96DD7 197 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 CITED4Q96RK1 184 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 CNTD2Q9H8S5 307 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 EBF1Q9UH73 591 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 EGFL7Q9UHF1 273 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 PALD1Q9ULE6 856 aa3.11□□□□□ -1.91
SCN1A-215ENST00000637285 CILPO75339 1184 aa3.1□□□□□ -1.91
SCN1A-215ENST00000637285 SDHBP21912 280 aa3.1□□□□□ -1.91
SCN1A-215ENST00000637285 VIPR1P32241 457 aa3.1□□□□□ -1.91
SCN1A-215ENST00000637285 DUSP4Q13115 394 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms