RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 POU5F1BQ06416 359 aa3.77□□□□□ -1.81
VIM-210ENST00000637053 SAFB2Q14151 953 aaKnown RBP eCLIP3.77□□□□□ -1.81
VIM-210ENST00000637053 IFI16Q16666 785 aaKnown RBP3.77□□□□□ -1.81
VIM-210ENST00000637053 NBPF9Q3BBW0 867 aa3.77□□□□□ -1.81
VIM-210ENST00000637053 MAP9Q49MG5 647 aa3.77□□□□□ -1.81
VIM-210ENST00000637053 EFCAB2Q5VUJ9 269 aa3.77□□□□□ -1.81
VIM-210ENST00000637053 PEAR1Q5VY43 1037 aaPredicted RBP3.77□□□□□ -1.81
VIM-210ENST00000637053 ENOX1Q8TC92 643 aaKnown RBP3.77□□□□□ -1.81
VIM-210ENST00000637053 RSPH9Q9H1X1 276 aaPredicted RBP3.77□□□□□ -1.81
VIM-210ENST00000637053 LATS2Q9NRM7 1088 aa3.77□□□□□ -1.81
VIM-210ENST00000637053 NLRP2Q9NX02 1062 aa3.77□□□□□ -1.81
VIM-210ENST00000637053 PPP1R9AQ9ULJ8 1098 aa3.77□□□□□ -1.81
VIM-210ENST00000637053 MRPL42Q9Y6G3 142 aaKnown RBP3.77□□□□□ -1.81
VIM-210ENST00000637053 TIMM44O43615 452 aa3.76□□□□□ -1.81
VIM-210ENST00000637053 DNAJC6O75061 913 aa3.76□□□□□ -1.81
VIM-210ENST00000637053 FGAP02671 866 aa3.76□□□□□ -1.81
VIM-210ENST00000637053 POU4F3Q15319 338 aa3.76□□□□□ -1.81
VIM-210ENST00000637053 ENOX2Q16206 610 aaKnown RBP3.76□□□□□ -1.81
VIM-210ENST00000637053 ANGEL2Q5VTE6 544 aaKnown RBP3.76□□□□□ -1.81
VIM-210ENST00000637053 CCDC174Q6PII3 467 aa3.76□□□□□ -1.81
VIM-210ENST00000637053 HRASLS5Q96KN8 279 aa3.76□□□□□ -1.81
VIM-210ENST00000637053 C8orf48Q96LL4 319 aa3.76□□□□□ -1.81
VIM-210ENST00000637053 TRIM56Q9BRZ2 755 aaKnown RBP3.76□□□□□ -1.81
VIM-210ENST00000637053 OSBPL2Q9H1P3 480 aa3.76□□□□□ -1.81
VIM-210ENST00000637053 CD320Q9NPF0 282 aa3.76□□□□□ -1.81
VIM-210ENST00000637053 BIN2Q9UBW5 565 aaPredicted RBP3.76□□□□□ -1.81
VIM-210ENST00000637053 PITPNM2Q9BZ72 1349 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 BICDL2A1A5D9 508 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 LDHAP00338 332 aaKnown RBP3.75□□□□□ -1.81
VIM-210ENST00000637053 APPP05067 770 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 CEACAM5P06731 702 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 GLI1P08151 1106 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 PDGFRBP09619 1106 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 FAM200BP0CF97 657 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 COL6A1P12109 1028 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 SERPINB4P48594 390 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 RBL2Q08999 1139 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 MRPL58Q14197 206 aaKnown RBP3.75□□□□□ -1.81
VIM-210ENST00000637053 CCSAPQ6IQ19 270 aaPredicted RBP3.75□□□□□ -1.81
VIM-210ENST00000637053 METTL16Q86W50 562 aaKnown RBP3.75□□□□□ -1.81
VIM-210ENST00000637053 EGFL6Q8IUX8 553 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 DRC7Q8IY82 874 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 TTC30BQ8N4P2 665 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 SVIPQ8NHG7 77 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 ANP32BQ92688 251 aaKnown RBP3.75□□□□□ -1.81
VIM-210ENST00000637053 NEUROD6Q96NK8 337 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 CDC5LQ99459 802 aaKnown RBP3.75□□□□□ -1.81
VIM-210ENST00000637053 TNKS2Q9H2K2 1166 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 IFT122Q9HBG6 1241 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 MKNK2Q9HBH9 465 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 CAPN10Q9HC96 672 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 CASS4Q9NQ75 786 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 RAD18Q9NS91 495 aa3.75□□□□□ -1.81
VIM-210ENST00000637053 PUF60Q9UHX1 559 aaKnown RBP3.75□□□□□ -1.81
VIM-210ENST00000637053 TTF2Q9UNY4 1162 aaKnown RBP3.75□□□□□ -1.81
VIM-210ENST00000637053 CTDP1Q9Y5B0 961 aaPredicted RBP3.75□□□□□ -1.81
VIM-210ENST00000637053 TMEM265A0A087WTH1 108 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 NFIBO00712 420 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 CBFA2T2O43439 604 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 AOC2O75106 756 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 CYP11A1P05108 521 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 FAM163BP0C2L3 166 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 AMPD3Q01432 767 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 ZP2Q05996 745 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 PCDH1Q08174 1060 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 SF3B2Q13435 895 aaKnown RBP3.74□□□□□ -1.81
VIM-210ENST00000637053 MAPRE1Q15691 268 aaKnown RBP3.74□□□□□ -1.81
VIM-210ENST00000637053 ZRSR2Q15696 482 aaKnown RBP3.74□□□□□ -1.81
VIM-210ENST00000637053 KCNA10Q16322 511 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 SWI5Q1ZZU3 235 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 TBC1D10BQ4KMP7 808 aaPredicted RBP3.74□□□□□ -1.81
VIM-210ENST00000637053 ODR4Q5SWX8 454 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 LDLRAD1Q5T700 205 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 L1TD1Q5T7N2 865 aaKnown RBP3.74□□□□□ -1.81
VIM-210ENST00000637053 TMEM164Q5U3C3 297 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 ABTB2Q8N961 1025 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 EDEM1Q92611 657 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 RELTQ969Z4 430 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 RUNDC1Q96C34 613 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 SLC39A13Q96H72 371 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 CSRNP1Q96S65 589 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 GMLQ99445 158 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 MPHOSPH6Q99547 160 aaKnown RBP3.74□□□□□ -1.81
VIM-210ENST00000637053 WDR18Q9BV38 432 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 ZHX3Q9H4I2 956 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 CCSER2Q9H7U1 834 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 CXXC1Q9P0U4 656 aaPredicted RBP3.74□□□□□ -1.81
VIM-210ENST00000637053 ZMIZ1Q9ULJ6 1067 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 SYNPO2Q9UMS6 1093 aa3.74□□□□□ -1.81
VIM-210ENST00000637053 NOVA2Q9UNW9 492 aaKnown RBP3.74□□□□□ -1.81
VIM-210ENST00000637053 A0A0G2JLL6 359 aaPredicted RBP3.73□□□□□ -1.81
VIM-210ENST00000637053 IFRD1O00458 451 aaPredicted RBP3.73□□□□□ -1.81
VIM-210ENST00000637053 ENPP3O14638 875 aa3.73□□□□□ -1.81
VIM-210ENST00000637053 FOXD2O60548 495 aaPredicted RBP3.73□□□□□ -1.81
VIM-210ENST00000637053 PDGFAP04085 211 aa3.73□□□□□ -1.81
VIM-210ENST00000637053 LDHCP07864 332 aa3.73□□□□□ -1.81
VIM-210ENST00000637053 DNAJA1P31689 397 aaKnown RBP3.73□□□□□ -1.81
VIM-210ENST00000637053 USP5P45974 858 aa3.73□□□□□ -1.81
VIM-210ENST00000637053 NEXNQ0ZGT2 675 aa3.73□□□□□ -1.81
VIM-210ENST00000637053 MTA1Q13330 715 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms