RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 FAM155AB1AL88 458 aaPredicted RBP18.9■□□□□ 0.62
CLN6-216ENST00000636876 ZBTB48P10074 688 aaPredicted RBP18.9■□□□□ 0.62
CLN6-216ENST00000636876 CAPNS2Q96L46 248 aa18.9■□□□□ 0.62
CLN6-216ENST00000636876 WDR18Q9BV38 432 aa18.9■□□□□ 0.62
CLN6-216ENST00000636876 SNX14Q9Y5W7 946 aa18.9■□□□□ 0.62
CLN6-216ENST00000636876 THSD7BQ9C0I4 1608 aa18.89■□□□□ 0.62
CLN6-216ENST00000636876 KDM4AO75164 1064 aa18.89■□□□□ 0.61
CLN6-216ENST00000636876 ECE1P42892 770 aa18.89■□□□□ 0.61
CLN6-216ENST00000636876 KRT32Q14532 448 aa18.89■□□□□ 0.61
CLN6-216ENST00000636876 RALYLQ86SE5 291 aaKnown RBP18.89■□□□□ 0.61
CLN6-216ENST00000636876 CLEC10AQ8IUN9 316 aa18.89■□□□□ 0.61
CLN6-216ENST00000636876 NCOA7Q8NI08 942 aa18.89■□□□□ 0.61
CLN6-216ENST00000636876 KANSL2Q9H9L4 492 aa18.89■□□□□ 0.61
CLN6-216ENST00000636876 AS3MTQ9HBK9 375 aa18.89■□□□□ 0.61
CLN6-216ENST00000636876 AFG3L2Q9Y4W6 797 aa18.89■□□□□ 0.61
CLN6-216ENST00000636876 IRF6O14896 467 aa18.88■□□□□ 0.61
CLN6-216ENST00000636876 ICA1Q05084 483 aa18.88■□□□□ 0.61
CLN6-216ENST00000636876 MKRN3Q13064 507 aaKnown RBP18.88■□□□□ 0.61
CLN6-216ENST00000636876 MB21D2Q8IYB1 491 aaPredicted RBP18.88■□□□□ 0.61
CLN6-216ENST00000636876 ZNF280CQ8ND82 737 aa18.88■□□□□ 0.61
CLN6-216ENST00000636876 BACH2Q9BYV9 841 aa18.88■□□□□ 0.61
CLN6-216ENST00000636876 ZSWIM5Q9P217 1185 aa18.88■□□□□ 0.61
CLN6-216ENST00000636876 KCNH4Q9UQ05 1017 aa18.88■□□□□ 0.61
CLN6-216ENST00000636876 CXCL11O14625 94 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 FOXN1O15353 648 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 SPP2Q13103 211 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 GRM1Q13255 1194 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 CYB5R4Q7L1T6 521 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 SIAH1Q8IUQ4 282 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 ACER1Q8TDN7 264 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 CEP95Q96GE4 821 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 IL17RBQ9NRM6 502 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 TCP11L1Q9NUJ3 509 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 MTMR4Q9NYA4 1195 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 NYAP2Q9P242 653 aa18.87■□□□□ 0.61
CLN6-216ENST00000636876 TRIM75PA6NK02 468 aa18.86■□□□□ 0.61
CLN6-216ENST00000636876 NMT2O60551 498 aa18.86■□□□□ 0.61
CLN6-216ENST00000636876 VEGFBP49765 207 aa18.86■□□□□ 0.61
CLN6-216ENST00000636876 NOGQ13253 232 aa18.86■□□□□ 0.61
CLN6-216ENST00000636876 ADCK5Q3MIX3 580 aa18.86■□□□□ 0.61
CLN6-216ENST00000636876 PPP4R3BQ5MIZ7 849 aa18.86■□□□□ 0.61
CLN6-216ENST00000636876 ARHGEF10LQ9HCE6 1279 aa18.86■□□□□ 0.61
CLN6-216ENST00000636876 WDR33Q9C0J8 1336 aaKnown RBP18.85■□□□□ 0.61
CLN6-216ENST00000636876 A0A1W2PRG0 241 aa18.85■□□□□ 0.61
CLN6-216ENST00000636876 TTLL1O95922 423 aa18.85■□□□□ 0.61
CLN6-216ENST00000636876 EEF2P13639 858 aaKnown RBP18.85■□□□□ 0.61
CLN6-216ENST00000636876 NOVP48745 357 aa18.85■□□□□ 0.61
CLN6-216ENST00000636876 GTF2A2P52657 109 aa18.85■□□□□ 0.61
CLN6-216ENST00000636876 ATP2B2Q01814 1243 aa18.85■□□□□ 0.61
CLN6-216ENST00000636876 SNAPC2Q13487 334 aa18.85■□□□□ 0.61
CLN6-216ENST00000636876 CCDC178Q5BJE1 867 aa18.85■□□□□ 0.61
CLN6-216ENST00000636876 IQCA1Q86XH1 822 aa18.85■□□□□ 0.61
CLN6-216ENST00000636876 NEK1Q96PY6 1258 aa18.85■□□□□ 0.61
CLN6-216ENST00000636876 KIAA1683Q9H0B3 1180 aa18.85■□□□□ 0.61
CLN6-216ENST00000636876 PTPRFP10586 1907 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 A0A0G2JLL6 359 aaPredicted RBP18.84■□□□□ 0.61
CLN6-216ENST00000636876 USP17L10C9JJH3 530 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 AOC2O75106 756 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 BACE1P56817 501 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 ANTXR2P58335 489 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 ANAPC15P60006 121 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 MTMR2Q13614 643 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 COL9A3Q14050 684 aaPredicted RBP18.84■□□□□ 0.61
CLN6-216ENST00000636876 PRRT2Q7Z6L0 340 aaPredicted RBP18.84■□□□□ 0.61
CLN6-216ENST00000636876 MS4A4AQ96JQ5 239 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 JAKMIP1Q96N16 626 aaKnown RBP18.84■□□□□ 0.61
CLN6-216ENST00000636876 FEZ1Q99689 392 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 ZKSCAN3Q9BRR0 538 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 UBAC1Q9BSL1 405 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 SH2D4AQ9H788 454 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 UPF2Q9HAU5 1272 aaKnown RBP18.84■□□□□ 0.61
CLN6-216ENST00000636876 CLIP2Q9UDT6 1046 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 TMX2Q9Y320 296 aa18.84■□□□□ 0.61
CLN6-216ENST00000636876 MANSC4A6NHS7 340 aaPredicted RBP18.83■□□□□ 0.6
CLN6-216ENST00000636876 C19orf81C9J6K1 198 aa18.83■□□□□ 0.6
CLN6-216ENST00000636876 PRC1O43663 620 aa18.83■□□□□ 0.6
CLN6-216ENST00000636876 HMGB1P09429 215 aaKnown RBP18.83■□□□□ 0.6
CLN6-216ENST00000636876 CETPP11597 493 aa18.83■□□□□ 0.6
CLN6-216ENST00000636876 MCM5P33992 734 aa18.83■□□□□ 0.6
CLN6-216ENST00000636876 KIF23Q02241 960 aaPredicted RBP18.83■□□□□ 0.6
CLN6-216ENST00000636876 SH3D19Q5HYK7 790 aa18.83■□□□□ 0.6
CLN6-216ENST00000636876 MKL1Q969V6 931 aa18.83■□□□□ 0.6
CLN6-216ENST00000636876 ZSCAN10Q96SZ4 725 aaPredicted RBP18.83■□□□□ 0.6
CLN6-216ENST00000636876 ZIC5Q96T25 663 aa18.83■□□□□ 0.6
CLN6-216ENST00000636876 STX8Q9UNK0 236 aa18.83■□□□□ 0.6
CLN6-216ENST00000636876 MYH4Q9Y623 1939 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 TNKSO95271 1327 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 PSMA5P28066 241 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 USP14P54578 494 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 HMGCS2P54868 508 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 MOGSQ13724 837 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 ZYXQ15942 572 aaKnown RBP18.82■□□□□ 0.6
CLN6-216ENST00000636876 RCSD1Q6JBY9 416 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 USP17L2Q6R6M4 530 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 CHST3Q7LGC8 479 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 DGKHQ86XP1 1220 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 ENAHQ8N8S7 591 aaPredicted RBP18.82■□□□□ 0.6
CLN6-216ENST00000636876 BRI3BPQ8WY22 251 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 IL17RAQ96F46 866 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 TTC14Q96N46 770 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms