RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ANTXR1Q9H6X2 564 aa15.25■□□□□ 0.03
CTSD-208ENST00000636843 CDK5RAP2Q96SN8 1893 aa15.25■□□□□ 0.03
CTSD-208ENST00000636843 USP17L15C9J2P7 530 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 USP17L13C9JLJ4 530 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 USP17L11C9JVI0 530 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 USP17L18D6R9N7 530 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 USP17L22D6RA61 530 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 USP17L17D6RBQ6 530 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 USP17L19D6RCP7 530 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 USP17L20D6RJB6 530 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 USP17L24Q0WX57 530 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 HDAC1Q13547 482 aaPredicted RBP15.24■□□□□ 0.03
CTSD-208ENST00000636843 TTF1Q15361 905 aaPredicted RBP15.24■□□□□ 0.03
CTSD-208ENST00000636843 Q3C1V9 767 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 CERKLQ49MI3 558 aaPredicted RBP15.24■□□□□ 0.03
CTSD-208ENST00000636843 USP6NLQ92738 828 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 FEZ1Q99689 392 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 PAGR1Q9BTK6 254 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 NBPF3Q9H094 633 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 KIAA1683Q9H0B3 1180 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 OGDHLQ9ULD0 1010 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 EXOC6BQ9Y2D4 811 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 RABGAP1Q9Y3P9 1069 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 NDUFB9Q9Y6M9 179 aa15.24■□□□□ 0.03
CTSD-208ENST00000636843 MYO5AQ9Y4I1 1855 aaKnown RBP15.24■□□□□ 0.03
CTSD-208ENST00000636843 PEX10O60683 326 aa15.23■□□□□ 0.03
CTSD-208ENST00000636843 PRKAR2AP13861 404 aaKnown RBP15.23■□□□□ 0.03
CTSD-208ENST00000636843 ZKSCAN1P17029 563 aaPredicted RBP15.23■□□□□ 0.03
CTSD-208ENST00000636843 RGS2P41220 211 aa15.23■□□□□ 0.03
CTSD-208ENST00000636843 ABCB5Q2M3G0 1257 aa15.23■□□□□ 0.03
CTSD-208ENST00000636843 MORN1Q5T089 497 aa15.23■□□□□ 0.03
CTSD-208ENST00000636843 GPR142Q7Z601 462 aa15.23■□□□□ 0.03
CTSD-208ENST00000636843 PLEKHH3Q7Z736 793 aa15.23■□□□□ 0.03
CTSD-208ENST00000636843 SKAP1Q86WV1 359 aa15.23■□□□□ 0.03
CTSD-208ENST00000636843 PORCNQ9H237 461 aa15.23■□□□□ 0.03
CTSD-208ENST00000636843 CABP5Q9NP86 173 aa15.23■□□□□ 0.03
CTSD-208ENST00000636843 ZBTB40Q9NUA8 1239 aa15.23■□□□□ 0.03
CTSD-208ENST00000636843 RANBP2P49792 3224 aaKnown RBP15.23■□□□□ 0.03
CTSD-208ENST00000636843 GLRX3O76003 335 aaKnown RBP15.22■□□□□ 0.03
CTSD-208ENST00000636843 MNX1P50219 401 aaPredicted RBP15.22■□□□□ 0.03
CTSD-208ENST00000636843 CCNA1P78396 465 aa15.22■□□□□ 0.03
CTSD-208ENST00000636843 RAB3GAP1Q15042 981 aa15.22■□□□□ 0.03
CTSD-208ENST00000636843 RHPN1Q8TCX5 695 aa15.22■□□□□ 0.03
CTSD-208ENST00000636843 RIOK1Q9BRS2 568 aaKnown RBP15.22■□□□□ 0.03
CTSD-208ENST00000636843 CWC22Q9HCG8 908 aaKnown RBP15.22■□□□□ 0.03
CTSD-208ENST00000636843 MAGEB6P1A0A0J9YX57 407 aa15.22■□□□□ 0.03
CTSD-208ENST00000636843 POLR3DP05423 398 aaPredicted RBP15.22■□□□□ 0.03
CTSD-208ENST00000636843 CACNB2Q08289 660 aaPredicted RBP15.22■□□□□ 0.03
CTSD-208ENST00000636843 ZYXQ15942 572 aaKnown RBP15.22■□□□□ 0.03
CTSD-208ENST00000636843 POTEEQ6S8J3 1075 aa15.22■□□□□ 0.03
CTSD-208ENST00000636843 CATSPERGQ6ZRH7 1159 aa15.22■□□□□ 0.03
CTSD-208ENST00000636843 APBA2Q99767 749 aa15.22■□□□□ 0.03
CTSD-208ENST00000636843 CRNKL1Q9BZJ0 848 aaKnown RBP15.22■□□□□ 0.03
CTSD-208ENST00000636843 C11orf49Q9H6J7 331 aa15.22■□□□□ 0.03
CTSD-208ENST00000636843 IL1RAPL2Q9NP60 686 aa15.22■□□□□ 0.03
CTSD-208ENST00000636843 STAP2Q9UGK3 403 aa15.22■□□□□ 0.03
CTSD-208ENST00000636843 PLXNB2O15031 1838 aa15.22■□□□□ 0.03
CTSD-208ENST00000636843 MYH1P12882 1939 aa15.21■□□□□ 0.03
CTSD-208ENST00000636843 SHMT1P34896 483 aa15.21■□□□□ 0.03
CTSD-208ENST00000636843 PLCD1P51178 756 aa15.21■□□□□ 0.03
CTSD-208ENST00000636843 MAP2K5Q13163 448 aa15.21■□□□□ 0.03
CTSD-208ENST00000636843 SLC9C2Q5TAH2 1124 aa15.21■□□□□ 0.03
CTSD-208ENST00000636843 LBX2Q6XYB7 198 aa15.21■□□□□ 0.03
CTSD-208ENST00000636843 C7orf61Q8IZ16 206 aa15.21■□□□□ 0.03
CTSD-208ENST00000636843 CLASRPQ8N2M8 674 aaKnown RBP15.21■□□□□ 0.03
CTSD-208ENST00000636843 ACER1Q8TDN7 264 aa15.21■□□□□ 0.03
CTSD-208ENST00000636843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.21■□□□□ 0.03
CTSD-208ENST00000636843 HMMRO75330 724 aa15.2■□□□□ 0.02
CTSD-208ENST00000636843 CNMDO75829 334 aa15.2■□□□□ 0.02
CTSD-208ENST00000636843 PDE6AP16499 860 aa15.2■□□□□ 0.02
CTSD-208ENST00000636843 VCAM1P19320 739 aa15.2■□□□□ 0.02
CTSD-208ENST00000636843 BMP8BP34820 402 aa15.2■□□□□ 0.02
CTSD-208ENST00000636843 GABPAQ06546 454 aa15.2■□□□□ 0.02
CTSD-208ENST00000636843 RPAP2Q8IXW5 612 aaPredicted RBP15.2■□□□□ 0.02
CTSD-208ENST00000636843 KIF1BPQ96EK5 621 aa15.2■□□□□ 0.02
CTSD-208ENST00000636843 EDC3Q96F86 508 aaKnown RBP15.2■□□□□ 0.02
CTSD-208ENST00000636843 IPO9Q96P70 1041 aaKnown RBP15.2■□□□□ 0.02
CTSD-208ENST00000636843 GDF15Q99988 308 aa15.2■□□□□ 0.02
CTSD-208ENST00000636843 SLC15A5A6NIM6 579 aa15.19■□□□□ 0.02
CTSD-208ENST00000636843 IFIT2P09913 472 aaKnown RBP15.19■□□□□ 0.02
CTSD-208ENST00000636843 CCL14Q16627 93 aa15.19■□□□□ 0.02
CTSD-208ENST00000636843 GUCY1A2P33402 732 aa15.18■□□□□ 0.02
CTSD-208ENST00000636843 C8orf34Q49A92 452 aa15.18■□□□□ 0.02
CTSD-208ENST00000636843 MFSD14CQ5VZR4 134 aa15.18■□□□□ 0.02
CTSD-208ENST00000636843 RPAP3Q9H6T3 665 aaPredicted RBP15.18■□□□□ 0.02
CTSD-208ENST00000636843 MCM9Q9NXL9 1143 aa15.18■□□□□ 0.02
CTSD-208ENST00000636843 ZMYND8Q9ULU4 1186 aaPredicted RBP15.18■□□□□ 0.02
CTSD-208ENST00000636843 IVNS1ABPQ9Y6Y0 642 aa15.18■□□□□ 0.02
CTSD-208ENST00000636843 TCRBV5S4A2TA0A5A2 114 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 GOLIM4O00461 696 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 RAB11FIP3O75154 756 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 HOXC6P09630 235 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 PTPREP23469 700 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 CCND3P30281 292 aaPredicted RBP15.17■□□□□ 0.02
CTSD-208ENST00000636843 SEPT2Q15019 361 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 LHX8Q68G74 356 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 DNAJC2Q99543 621 aaKnown RBP15.17■□□□□ 0.02
CTSD-208ENST00000636843 PFASO15067 1338 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 ZNF532Q9HCE3 1301 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 SZT2Q5T011 3432 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms