RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 TSKSQ9UJT2 592 aa9.75□□□□□ -0.85
PNKP-226ENST00000636840 AGTPBP1Q9UPW5 1226 aa9.75□□□□□ -0.85
PNKP-226ENST00000636840 FOCADQ5VW36 1801 aa9.75□□□□□ -0.85
PNKP-226ENST00000636840 TSPY2A6NKD2 308 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 RANBP6O60518 1105 aaKnown RBP9.74□□□□□ -0.85
PNKP-226ENST00000636840 TLR2O60603 784 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 AKR1B1P15121 316 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 IRX3P78415 501 aaPredicted RBP9.74□□□□□ -0.85
PNKP-226ENST00000636840 TFAP4Q01664 338 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 SP3Q02447 781 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 ICA1Q05084 483 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 CTDSPL2Q05D32 466 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 TRDNQ13061 729 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 CCDC178Q5BJE1 867 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 FAM43AQ8N2R8 423 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 NEDD1Q8NHV4 660 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 SMCR8Q8TEV9 937 aaPredicted RBP9.74□□□□□ -0.85
PNKP-226ENST00000636840 GTF3C2Q8WUA4 911 aaPredicted RBP9.74□□□□□ -0.85
PNKP-226ENST00000636840 ERO1AQ96HE7 468 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 KIAA1683Q9H0B3 1180 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 GOPCQ9HD26 462 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 U3KPZ7 1027 aaPredicted RBP9.74□□□□□ -0.85
PNKP-226ENST00000636840 ZMYM6O95789 1325 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 CDK5RAP2Q96SN8 1893 aa9.74□□□□□ -0.85
PNKP-226ENST00000636840 USP17L15C9J2P7 530 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 USP17L13C9JLJ4 530 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 USP17L11C9JVI0 530 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 USP17L18D6R9N7 530 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 USP17L22D6RA61 530 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 USP17L17D6RBQ6 530 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 USP17L19D6RCP7 530 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 USP17L20D6RJB6 530 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 SGSM2O43147 1006 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 RAD21O60216 631 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 CDC45O75419 566 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 PRDM1O75626 825 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 RASA1P20936 1047 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 HOXA7P31268 230 aaPredicted RBP9.73□□□□□ -0.85
PNKP-226ENST00000636840 GCLCP48506 637 aaPredicted RBP9.73□□□□□ -0.85
PNKP-226ENST00000636840 JAG1P78504 1218 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 USP17L24Q0WX57 530 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 CRHR2Q13324 411 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 ZYXQ15942 572 aaKnown RBP9.73□□□□□ -0.85
PNKP-226ENST00000636840 AKNAD1Q5T1N1 836 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 GPAT2Q6NUI2 795 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 CNNM2Q9H8M5 875 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 HOXC10Q9NYD6 342 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 NYAP2Q9P242 653 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.73□□□□□ -0.85
PNKP-226ENST00000636840 CLIP2Q9UDT6 1046 aa9.73□□□□□ -0.85
PNKP-226ENST00000636840 BAZ2AQ9UIF9 1905 aaKnown RBP9.73□□□□□ -0.85
PNKP-226ENST00000636840 NAV1Q8NEY1 1877 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 PCNTO95613 3336 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 ORC4O43929 436 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 EIF5BO60841 1220 aaKnown RBP9.72□□□□□ -0.85
PNKP-226ENST00000636840 TTLL1O95922 423 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 EEF2P13639 858 aaKnown RBP9.72□□□□□ -0.85
PNKP-226ENST00000636840 HOXD10P28358 340 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 GUCY1A2P33402 732 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 HAND2P61296 217 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 EVX2Q03828 476 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 RRP12Q5JTH9 1297 aaKnown RBP9.72□□□□□ -0.85
PNKP-226ENST00000636840 CCAR1Q8IX12 1150 aaKnown RBP9.72□□□□□ -0.85
PNKP-226ENST00000636840 ACER1Q8TDN7 264 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 ZNF296Q8WUU4 475 aaPredicted RBP9.72□□□□□ -0.85
PNKP-226ENST00000636840 LPAR1Q92633 364 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 ESR2Q92731 530 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 C12orf42Q96LP6 360 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 KRT23Q9C075 422 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 EMILIN3Q9NT22 766 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 TMX2Q9Y320 296 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 ROBO3Q96MS0 1386 aa9.72□□□□□ -0.85
PNKP-226ENST00000636840 DOCK1Q14185 1865 aa9.71□□□□□ -0.85
PNKP-226ENST00000636840 FGRP09769 529 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 MOGSQ13724 837 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 COG2Q14746 738 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 PKN2Q16513 984 aaKnown RBP9.71□□□□□ -0.86
PNKP-226ENST00000636840 FAM47AQ5JRC9 791 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 RNF20Q5VTR2 975 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 C17orf99Q6UX52 265 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 IQCA1Q86XH1 822 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 STAG1Q8WVM7 1258 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 MAP4K1Q92918 833 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 MKL1Q969V6 931 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 TTC14Q96N46 770 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 ESYT1Q9BSJ8 1104 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 ASCC2Q9H1I8 757 aaPredicted RBP9.71□□□□□ -0.86
PNKP-226ENST00000636840 VCPKMTQ9H867 229 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 ANO2Q9NQ90 1003 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 MTMR4Q9NYA4 1195 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 SYNPO2Q9UMS6 1093 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 OTOFQ9HC10 1997 aa9.71□□□□□ -0.86
PNKP-226ENST00000636840 SMIM22K7EJ46 135 aa9.7□□□□□ -0.86
PNKP-226ENST00000636840 FOXP2O15409 715 aa9.7□□□□□ -0.86
PNKP-226ENST00000636840 GNRH1P01148 92 aa9.7□□□□□ -0.86
PNKP-226ENST00000636840 CYP2C8P10632 490 aa9.7□□□□□ -0.86
PNKP-226ENST00000636840 SHROOM1Q2M3G4 852 aaPredicted RBP9.7□□□□□ -0.86
PNKP-226ENST00000636840 TREML2Q5T2D2 321 aa9.7□□□□□ -0.86
PNKP-226ENST00000636840 CATSPERGQ6ZRH7 1159 aa9.7□□□□□ -0.86
PNKP-226ENST00000636840 CTU1Q7Z7A3 348 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms