RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 F8W031 263 aaPredicted RBP8.02□□□□□ -1.13
UPF3B-205ENST00000636792 MBD4O95243 580 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 EPS15P42566 896 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 RBM5P52756 815 aaKnown RBP eCLIP8.02□□□□□ -1.13
UPF3B-205ENST00000636792 GRIK5Q16478 980 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 SBK1Q52WX2 424 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 CWC27Q6UX04 472 aaKnown RBP8.02□□□□□ -1.13
UPF3B-205ENST00000636792 KIAA1211Q6ZU35 1233 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 ADGRA1Q86SQ6 560 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 LDHDQ86WU2 507 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 TEX11Q8IYF3 940 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 SNIP1Q8TAD8 396 aaKnown RBP8.02□□□□□ -1.13
UPF3B-205ENST00000636792 FAM151AQ8WW52 585 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 THAP11Q96EK4 314 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 STRBPQ96SI9 672 aaKnown RBP8.02□□□□□ -1.13
UPF3B-205ENST00000636792 MXD3Q9BW11 206 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 PUS7LQ9H0K6 701 aaKnown RBP8.02□□□□□ -1.13
UPF3B-205ENST00000636792 ATP13A2Q9NQ11 1180 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 AATFQ9NY61 560 aaKnown RBP eCLIP8.02□□□□□ -1.13
UPF3B-205ENST00000636792 CTNNA3Q9UI47 895 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 FLT1P17948 1338 aa8.02□□□□□ -1.13
UPF3B-205ENST00000636792 DOCK1Q14185 1865 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 UNCXA6NJT0 531 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 PATL2C9JE40 543 aaKnown RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 TERTO14746 1132 aaKnown RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 WDHD1O75717 1129 aaPredicted RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 HLA-DOAP06340 250 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 TBC1D10BQ4KMP7 808 aaPredicted RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 CDC42EP5Q6NZY7 148 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 TTC6Q86TZ1 520 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 METTL3Q86U44 580 aaKnown RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 LCORLQ8N3X6 602 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 TRPM4Q8TD43 1214 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 DCPSQ96C86 337 aaKnown RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 PRMT6Q96LA8 375 aaPredicted RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 FAM227BQ96M60 508 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 OSBPL5Q9H0X9 879 aaPredicted RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 EHD4Q9H223 541 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 ZNF287Q9HBT7 754 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 GPBP1L1Q9HC44 474 aaPredicted RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 GGA3Q9NZ52 723 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 ZNF70Q9UC06 446 aaPredicted RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 MKRN1Q9UHC7 482 aaKnown RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 GREB1LQ9C091 1923 aaPredicted RBP8.01□□□□□ -1.13
UPF3B-205ENST00000636792 ATAD5Q96QE3 1844 aa8.01□□□□□ -1.13
UPF3B-205ENST00000636792 FAM181BA6NEQ2 426 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 M0R2C6 588 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 WNT7AO00755 349 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 HSPD1P10809 573 aaKnown RBP8□□□□□ -1.13
UPF3B-205ENST00000636792 MCCP23508 829 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 NF2P35240 595 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 USP5P45974 858 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 FUT2Q10981 343 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 C8orf34Q49A92 452 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 RNF20Q5VTR2 975 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 CDC37L1Q7L3B6 337 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 SULF1Q8IWU6 871 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 FAM160A2Q8N612 972 aaPredicted RBP8□□□□□ -1.13
UPF3B-205ENST00000636792 MIGA1Q8NAN2 632 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 KCNV2Q8TDN2 545 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 MAP4K1Q92918 833 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 NAPBQ9H115 298 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 TDRD3Q9H7E2 651 aaKnown RBP8□□□□□ -1.13
UPF3B-205ENST00000636792 ARMT1Q9H993 441 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 UPF2Q9HAU5 1272 aaKnown RBP8□□□□□ -1.13
UPF3B-205ENST00000636792 DCP1AQ9NPI6 582 aaPredicted RBP8□□□□□ -1.13
UPF3B-205ENST00000636792 GINM1Q9NU53 330 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 USP40Q9NVE5 1235 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 DAXXQ9UER7 740 aaPredicted RBP8□□□□□ -1.13
UPF3B-205ENST00000636792 SWAP70Q9UH65 585 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 HERC5Q9UII4 1024 aaKnown RBP8□□□□□ -1.13
UPF3B-205ENST00000636792 ANAPC4Q9UJX5 808 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 SLC4A4Q9Y6R1 1079 aa8□□□□□ -1.13
UPF3B-205ENST00000636792 OTOFQ9HC10 1997 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 GSG1L2A8MUP6 293 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 SLC3A2P08195 630 aaKnown RBP7.99□□□□□ -1.13
UPF3B-205ENST00000636792 SNRPBP14678 240 aaKnown RBP7.99□□□□□ -1.13
UPF3B-205ENST00000636792 YY1P25490 414 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 TDO2P48775 406 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 FKBP1BP68106 108 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 HIC1Q14526 733 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 NBPF9Q3BBW0 867 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 ANGEL2Q5VTE6 544 aaKnown RBP7.99□□□□□ -1.13
UPF3B-205ENST00000636792 DCAF15Q66K64 600 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 ZNF589Q86UQ0 364 aaPredicted RBP7.99□□□□□ -1.13
UPF3B-205ENST00000636792 METTL16Q86W50 562 aaKnown RBP7.99□□□□□ -1.13
UPF3B-205ENST00000636792 SKAP1Q86WV1 359 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 IFNL3Q8IZI9 196 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 SH3RF3Q8TEJ3 882 aaPredicted RBP7.99□□□□□ -1.13
UPF3B-205ENST00000636792 KIFC2Q96AC6 838 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 TRIM47Q96LD4 638 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 RNF41Q9H4P4 317 aaPredicted RBP7.99□□□□□ -1.13
UPF3B-205ENST00000636792 ANO2Q9NQ90 1003 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 PI4KBQ9UBF8 816 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 SLC27A5Q9Y2P5 690 aa7.99□□□□□ -1.13
UPF3B-205ENST00000636792 CNTNAP1P78357 1384 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 DDX11L8A8MPP1 907 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 EGFRP00533 1210 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 SMPD1P17405 629 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 HIRAP54198 1017 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms