RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 TMOD2Q9NZR1 351 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 BTBD7Q9P203 1132 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 LRP2BPQ9P2M1 347 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 BIN2Q9UBW5 565 aaPredicted RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 FBXO3Q9UK99 471 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 TAOK2Q9UL54 1235 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 ZBTB21Q9ULJ3 1066 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 ZMYND8Q9ULU4 1186 aaPredicted RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 AGTPBP1Q9UPW5 1226 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 COG6Q9Y2V7 657 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 NOP58Q9Y2X3 529 aaKnown RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 SUGT1Q9Y2Z0 365 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 MYH11P35749 1972 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 C2orf16Q68DN1 1984 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 TDRD15B5MCY1 1934 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 MTCL1Q9Y4B5 1905 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 ZNF532Q9HCE3 1301 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 KIF26AQ9ULI4 1882 aaPredicted RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 NCOR1O75376 2440 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 USP17L5A8MUK1 530 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 GOLIM4O00461 696 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 TNPO2O14787 897 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 ZBTB22O15209 634 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 FOXP2O15409 715 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 ADCY6O43306 1168 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 COBLO75128 1261 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 NPM3O75607 178 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 IDH1O75874 414 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 FARP2O94887 1054 aaPredicted RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 IGHA2P01877 340 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 TFRCP02786 760 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 LDHCP07864 332 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 UQCRFS1P1P0C7P4 283 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 AKR1B1P15121 316 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 PDE6AP16499 860 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 ITGB8P26012 769 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 CYP2C19P33261 490 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 EPHB4P54760 987 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 FCGRTP55899 365 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 BACE1P56817 501 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 HERVK_113P62684 666 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 GABPAQ06546 454 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 OS9Q13438 667 aaPredicted RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 IRF5Q13568 498 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 MVPQ14764 893 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 KIF22Q14807 665 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 FAM110CQ1W6H9 321 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 LRRC26Q2I0M4 334 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 MORN1Q5T089 497 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 MAP3K21Q5TCX8 1036 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 DIEXFQ68CQ4 756 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 SPTY2D1Q68D10 685 aaPredicted RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 LHX8Q68G74 356 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 TATDN1Q6P1N9 297 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 SAMD1Q6SPF0 538 aaPredicted RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 CATSPERGQ6ZRH7 1159 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 SH3RF1Q7Z6J0 888 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 AACSQ86V21 672 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 ITPRIPQ8IWB1 547 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 C7orf61Q8IZ16 206 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 PROCA1Q8NCQ7 364 aaPredicted RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 ZNF280CQ8ND82 737 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 RHPN1Q8TCX5 695 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 PPP1R13LQ8WUF5 828 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 LENG1Q96BZ8 264 aaPredicted RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 ATG4CQ96DT6 458 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 PARK7Q99497 189 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 DNAJC2Q99543 621 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 NUP88Q99567 741 aaPredicted RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 GDF15Q99988 308 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 WDR18Q9BV38 432 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 GNL3Q9BVP2 549 aaKnown RBP eCLIP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 PUS7LQ9H0K6 701 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 BOLA2Q9H3K6 86 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 ZCCHC17Q9NP64 241 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 GPR108Q9NPR9 543 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 PAK6Q9NQU5 681 aaPredicted RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 PICK1Q9NRD5 415 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 ZBTB40Q9NUA8 1239 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 GNL3LQ9NVN8 582 aaKnown RBP1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 MORF4L1Q9UBU8 362 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 AKAP2Q9Y2D5 859 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 WDR87Q6ZQQ6 2873 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 PLXNA3P51805 1871 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 KMT2EQ8IZD2 1858 aa1.97□□□□□ -2.09
SYNGAP1-216ENST00000636640 CDH23Q9H251 3354 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 MAGEB6P1A0A0J9YX57 407 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 MYADML2A6NDP7 307 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 SPDYE16A6NNV3 312 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L10C9JJH3 530 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L12C9JPN9 530 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L21D6R901 530 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 M0R2C6 588 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 IPO8O15397 1037 aaKnown RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 MBD4O95243 580 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 PGK2P07205 417 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 CT47B1P0C2W7 299 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 COL6A1P12109 1028 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 EEF2P13639 858 aaKnown RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 PRKAR2AP13861 404 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms