RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 C3orf67Q6ZVT6 689 aa14.24□□□□□ -0.13
PTPN11-205ENST00000635625 CELF1Q92879 486 aaKnown RBP14.24□□□□□ -0.13
PTPN11-205ENST00000635625 NSUN4Q96CB9 384 aaKnown RBP14.24□□□□□ -0.13
PTPN11-205ENST00000635625 DACH1Q9UI36 760 aa14.24□□□□□ -0.13
PTPN11-205ENST00000635625 RTCBQ9Y3I0 505 aaKnown RBP14.24□□□□□ -0.13
PTPN11-205ENST00000635625 CBFA2T2O43439 604 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 PTPREP23469 700 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 MARCKSP29966 332 aaPredicted RBP14.23□□□□□ -0.13
PTPN11-205ENST00000635625 KCNJ6P48051 423 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 CCDC178Q5BJE1 867 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 CT47A1Q5JQC4 288 aaPredicted RBP14.23□□□□□ -0.13
PTPN11-205ENST00000635625 IFIT1BQ5T764 474 aaKnown RBP14.23□□□□□ -0.13
PTPN11-205ENST00000635625 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 KRBA2Q6ZNG9 492 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 LRRC8AQ8IWT6 810 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 MPNDQ8N594 471 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 SDR42E1Q8WUS8 393 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 PDCL3Q9H2J4 239 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 INCENPQ9NQS7 918 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 KCNH3Q9ULD8 1083 aa14.23□□□□□ -0.13
PTPN11-205ENST00000635625 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTPN11-205ENST00000635625 ENAHQ8N8S7 591 aaPredicted RBP14.22□□□□□ -0.13
PTPN11-205ENST00000635625 TRIML1Q8N9V2 468 aa14.22□□□□□ -0.13
PTPN11-205ENST00000635625 SBF2Q86WG5 1849 aa14.22□□□□□ -0.13
PTPN11-205ENST00000635625 TNRC6CQ9HCJ0 1690 aaKnown RBP14.22□□□□□ -0.13
PTPN11-205ENST00000635625 BTBD18B2RXH4 712 aa14.22□□□□□ -0.13
PTPN11-205ENST00000635625 KIF2AO00139 706 aaPredicted RBP14.22□□□□□ -0.13
PTPN11-205ENST00000635625 KRT2P35908 639 aa14.22□□□□□ -0.13
PTPN11-205ENST00000635625 MYL5Q02045 173 aa14.22□□□□□ -0.13
PTPN11-205ENST00000635625 PDE4BQ07343 736 aa14.22□□□□□ -0.13
PTPN11-205ENST00000635625 FAM177A1Q8N128 213 aaPredicted RBP14.22□□□□□ -0.13
PTPN11-205ENST00000635625 CNNM3Q8NE01 707 aa14.22□□□□□ -0.13
PTPN11-205ENST00000635625 NUP133Q8WUM0 1156 aa14.22□□□□□ -0.13
PTPN11-205ENST00000635625 FBXO2Q9UK22 296 aaPredicted RBP14.22□□□□□ -0.13
PTPN11-205ENST00000635625 LEMD3Q9Y2U8 911 aa14.22□□□□□ -0.13
PTPN11-205ENST00000635625 SRPRBQ9Y5M8 271 aaKnown RBP14.22□□□□□ -0.13
PTPN11-205ENST00000635625 GNPATO15228 680 aa14.21□□□□□ -0.13
PTPN11-205ENST00000635625 HMGB2P26583 209 aaKnown RBP14.21□□□□□ -0.13
PTPN11-205ENST00000635625 GSTO1P78417 241 aa14.21□□□□□ -0.13
PTPN11-205ENST00000635625 MECOMQ03112 1051 aa14.21□□□□□ -0.13
PTPN11-205ENST00000635625 MKRN3Q13064 507 aaKnown RBP14.21□□□□□ -0.13
PTPN11-205ENST00000635625 CTR9Q6PD62 1173 aa14.21□□□□□ -0.13
PTPN11-205ENST00000635625 C15orf52Q6ZUT6 534 aaKnown RBP14.21□□□□□ -0.13
PTPN11-205ENST00000635625 DEFB132Q7Z7B7 95 aa14.21□□□□□ -0.13
PTPN11-205ENST00000635625 EFCAB3Q8N7B9 438 aa14.21□□□□□ -0.13
PTPN11-205ENST00000635625 WDR66Q8TBY9 1149 aa14.21□□□□□ -0.13
PTPN11-205ENST00000635625 CACTINQ8WUQ7 758 aaKnown RBP14.21□□□□□ -0.13
PTPN11-205ENST00000635625 ZKSCAN3Q9BRR0 538 aa14.21□□□□□ -0.13
PTPN11-205ENST00000635625 NRBP1Q9UHY1 535 aa14.21□□□□□ -0.13
PTPN11-205ENST00000635625 CCNL1Q9UK58 526 aaPredicted RBP14.21□□□□□ -0.13
PTPN11-205ENST00000635625 IQSEC3Q9UPP2 1182 aaPredicted RBP14.21□□□□□ -0.13
PTPN11-205ENST00000635625 PAXBP1Q9Y5B6 917 aa14.21□□□□□ -0.13
PTPN11-205ENST00000635625 TUBB4AP04350 444 aa14.2□□□□□ -0.14
PTPN11-205ENST00000635625 TOB1P50616 345 aaPredicted RBP14.2□□□□□ -0.14
PTPN11-205ENST00000635625 FUT2Q10981 343 aa14.2□□□□□ -0.14
PTPN11-205ENST00000635625 CCDC144BQ3MJ40 725 aa14.2□□□□□ -0.14
PTPN11-205ENST00000635625 NT5DC1Q5TFE4 455 aa14.2□□□□□ -0.14
PTPN11-205ENST00000635625 TMTC3Q6ZXV5 915 aa14.2□□□□□ -0.14
PTPN11-205ENST00000635625 FERMT2Q96AC1 680 aa14.2□□□□□ -0.14
PTPN11-205ENST00000635625 PYM1Q9BRP8 204 aaKnown RBP14.2□□□□□ -0.14
PTPN11-205ENST00000635625 PHF20Q9BVI0 1012 aa14.2□□□□□ -0.14
PTPN11-205ENST00000635625 ROBO3Q96MS0 1386 aa14.2□□□□□ -0.14
PTPN11-205ENST00000635625 NAV1Q8NEY1 1877 aa14.2□□□□□ -0.14
PTPN11-205ENST00000635625 IRS2Q9Y4H2 1338 aa14.2□□□□□ -0.14
PTPN11-205ENST00000635625 TRIM75PA6NK02 468 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 KIF5BP33176 963 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 GUCY1A2P33402 732 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 TRAPPC10P48553 1259 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 TROAPQ12815 778 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 BICDL1Q6ZP65 573 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 STK11IPQ8N1F8 1099 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 C17orf53Q8N3J3 647 aaPredicted RBP14.19□□□□□ -0.14
PTPN11-205ENST00000635625 CTCFLQ8NI51 663 aaPredicted RBP14.19□□□□□ -0.14
PTPN11-205ENST00000635625 DCP1AQ9NPI6 582 aaPredicted RBP14.19□□□□□ -0.14
PTPN11-205ENST00000635625 DYNLL1P63167 89 aaKnown RBP14.19□□□□□ -0.14
PTPN11-205ENST00000635625 LRMPQ12912 555 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 NCAPHQ15003 741 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 SYCP1Q15431 976 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 IER5LQ5T953 404 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 METTL16Q86W50 562 aaKnown RBP14.19□□□□□ -0.14
PTPN11-205ENST00000635625 AMOTL1Q8IY63 956 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 MLKLQ8NB16 471 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 ZNF384Q8TF68 577 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 SLC39A7Q92504 469 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 AATFQ9NY61 560 aaKnown RBP eCLIP14.19□□□□□ -0.14
PTPN11-205ENST00000635625 KCNJ14Q9UNX9 436 aa14.19□□□□□ -0.14
PTPN11-205ENST00000635625 USP17L12C9JPN9 530 aa14.18□□□□□ -0.14
PTPN11-205ENST00000635625 USP17L21D6R901 530 aa14.18□□□□□ -0.14
PTPN11-205ENST00000635625 CCP110O43303 1012 aa14.18□□□□□ -0.14
PTPN11-205ENST00000635625 GRAPQ13588 217 aa14.18□□□□□ -0.14
PTPN11-205ENST00000635625 DZIP1Q86YF9 867 aaKnown RBP14.18□□□□□ -0.14
PTPN11-205ENST00000635625 CCDC112Q8NEF3 446 aa14.18□□□□□ -0.14
PTPN11-205ENST00000635625 GRAPLQ8TC17 118 aaPredicted RBP14.18□□□□□ -0.14
PTPN11-205ENST00000635625 XDHP47989 1333 aa14.18□□□□□ -0.14
PTPN11-205ENST00000635625 SMC2O95347 1197 aa14.17□□□□□ -0.14
PTPN11-205ENST00000635625 LDHCP07864 332 aa14.17□□□□□ -0.14
PTPN11-205ENST00000635625 SKILP12757 684 aa14.17□□□□□ -0.14
PTPN11-205ENST00000635625 TM4SF1P30408 202 aa14.17□□□□□ -0.14
PTPN11-205ENST00000635625 MDM2Q00987 491 aaPredicted RBP14.17□□□□□ -0.14
PTPN11-205ENST00000635625 POSTNQ15063 836 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms