RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 HHATQ5VTY9 493 aa12.95□□□□□ -0.34
COL11A1-211ENST00000635193 ZNF804AQ7Z570 1209 aa12.95□□□□□ -0.34
COL11A1-211ENST00000635193 SDCCAG8Q86SQ7 713 aaPredicted RBP12.95□□□□□ -0.34
COL11A1-211ENST00000635193 PPP1R13BQ96KQ4 1090 aa12.95□□□□□ -0.34
COL11A1-211ENST00000635193 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
COL11A1-211ENST00000635193 EDC4Q6P2E9 1401 aaKnown RBP12.95□□□□□ -0.34
COL11A1-211ENST00000635193 F8W031 263 aaPredicted RBP12.95□□□□□ -0.34
COL11A1-211ENST00000635193 HSPA1LP34931 641 aa12.95□□□□□ -0.34
COL11A1-211ENST00000635193 CTNNA1P35221 906 aaKnown RBP12.95□□□□□ -0.34
COL11A1-211ENST00000635193 HNRNPH2P55795 449 aaKnown RBP12.95□□□□□ -0.34
COL11A1-211ENST00000635193 NUF2Q9BZD4 464 aa12.95□□□□□ -0.34
COL11A1-211ENST00000635193 ASXL2Q76L83 1435 aa12.95□□□□□ -0.34
COL11A1-211ENST00000635193 ADAMTS2O95450 1211 aa12.95□□□□□ -0.34
COL11A1-211ENST00000635193 RBM6P78332 1123 aaKnown RBP12.95□□□□□ -0.34
COL11A1-211ENST00000635193 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
COL11A1-211ENST00000635193 GPIHBP1Q8IV16 184 aa12.95□□□□□ -0.34
COL11A1-211ENST00000635193 SSH3Q8TE77 659 aa12.95□□□□□ -0.34
COL11A1-211ENST00000635193 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.95□□□□□ -0.34
COL11A1-211ENST00000635193 PTPRTO14522 1441 aa12.95□□□□□ -0.34
COL11A1-211ENST00000635193 PFKFB2O60825 505 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 PLCG2P16885 1265 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 ATP5JP18859 108 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 INF2Q27J81 1249 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 CCDC84Q86UT8 332 aaPredicted RBP12.94□□□□□ -0.34
COL11A1-211ENST00000635193 OR8K1Q8NGG5 319 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 EXOC4Q96A65 974 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 CSRNP2Q9H175 543 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 CMA1P23946 247 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 TXKP42681 527 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 RASIP1Q5U651 963 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 ICE2Q659A1 982 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 FCHSD1Q86WN1 690 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 DDX27Q96GQ7 796 aaKnown RBP12.94□□□□□ -0.34
COL11A1-211ENST00000635193 HDAC9Q9UKV0 1011 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 PCDHA7Q9UN72 937 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 A0A0D9SFI3 127 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 PFDN1O60925 122 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 ERCC5P28715 1186 aaPredicted RBP12.94□□□□□ -0.34
COL11A1-211ENST00000635193 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 KLHL30Q0D2K2 578 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 PPP2R5BQ15173 497 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 NBPF14Q5TI25 921 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 MCTP2Q6DN12 878 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 TRIM58Q8NG06 486 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 IP6K1Q92551 441 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 ZNF594Q96JF6 807 aaPredicted RBP12.94□□□□□ -0.34
COL11A1-211ENST00000635193 SETDB2Q96T68 719 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 FANCLQ9NW38 375 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 KLHL14Q9P2G3 628 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 GUCY2FP51841 1108 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 TERF2Q15554 542 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 DIXDC1Q155Q3 683 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 DENND2CQ68D51 928 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 SIRT1Q96EB6 747 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 JPH2Q9BR39 696 aaPredicted RBP12.94□□□□□ -0.34
COL11A1-211ENST00000635193 USH1CQ9Y6N9 552 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 ABCC2Q92887 1545 aa12.94□□□□□ -0.34
COL11A1-211ENST00000635193 CALUO43852 315 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-211ENST00000635193 RFC4P35249 363 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 AKNAD1Q5T1N1 836 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 SFMBT2Q5VUG0 894 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 IQCDQ96DY2 449 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 SBNO1A3KN83 1393 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 ITGA6P23229 1130 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 ANKRD20A3Q5VUR7 823 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 SYCE1Q8N0S2 351 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 FAM89AQ96GI7 184 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 PSMD1Q99460 953 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 KCNJ18B7U540 433 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 RGS16O15492 202 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-211ENST00000635193 ZWINTO95229 277 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 KCNJ12Q14500 433 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 LONRF2Q1L5Z9 754 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 SMC1BQ8NDV3 1235 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 LDHBP07195 334 aaKnown RBP12.93□□□□□ -0.34
COL11A1-211ENST00000635193 E2F5Q15329 346 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 PUM3Q15397 648 aaKnown RBP12.93□□□□□ -0.34
COL11A1-211ENST00000635193 RRAGAQ7L523 313 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 KIFAP3Q92845 792 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 PLEKHA4Q9H4M7 779 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 FAM207AQ9NSI2 230 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-211ENST00000635193 MAST1Q9Y2H9 1570 aa12.93□□□□□ -0.34
COL11A1-211ENST00000635193 NDC80O14777 642 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 OPHN1O60890 802 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 FLOT1O75955 427 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 ERCC3P19447 782 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 ARL1P40616 181 aaPredicted RBP12.92□□□□□ -0.34
COL11A1-211ENST00000635193 NDUFA8P51970 172 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 ST5P78524 1137 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 GCKRQ14397 625 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 PEX26Q7Z412 305 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 C2CD5Q86YS7 1000 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 MRRFQ96E11 262 aaKnown RBP12.92□□□□□ -0.34
COL11A1-211ENST00000635193 EDC3Q96F86 508 aaKnown RBP12.92□□□□□ -0.34
COL11A1-211ENST00000635193 DENND2AQ9ULE3 1009 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 MRPL12P52815 198 aaKnown RBP12.92□□□□□ -0.34
COL11A1-211ENST00000635193 COG7P83436 770 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.92□□□□□ -0.34
COL11A1-211ENST00000635193 ADGRL2O95490 1459 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms