RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 HPSEQ9Y251 543 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 V9GY48 417 aaPredicted RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 NAV1Q8NEY1 1877 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 A0A1B0GVL5 298 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 PALM3A6NDB9 673 aaPredicted RBP6.41□□□□□ -1.38
NEK3-211ENST00000629912 UBE2Q2LH0YL09 131 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 RIMBP2O15034 1052 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 NMT2O60551 498 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 ZNF202O95125 648 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 PTPREP23469 700 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 CLCN1P35523 988 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 PLCD1P51178 756 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 NDUFA8P51970 172 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 GRM4Q14833 912 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 PFKFB3Q16875 520 aaPredicted RBP6.41□□□□□ -1.38
NEK3-211ENST00000629912 GRIPAP1Q4V328 841 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 RESP18Q5W5W9 173 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 ZSCAN30Q86W11 494 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 C2CD5Q86YS7 1000 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 MAPKAPK5Q8IW41 473 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 CKAP2LQ8IYA6 745 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 CCDC82Q8N4S0 544 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 C7orf43Q8WVR3 580 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 CNKSR1Q969H4 720 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 DYNLL2Q96FJ2 89 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 SDF4Q9BRK5 362 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 KAT14Q9H8E8 782 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 CBX8Q9HC52 389 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 RRAGDQ9NQL2 400 aaPredicted RBP6.41□□□□□ -1.38
NEK3-211ENST00000629912 SH3GLB2Q9NR46 395 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 ANO10Q9NW15 660 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 RGS17Q9UGC6 210 aaPredicted RBP6.41□□□□□ -1.38
NEK3-211ENST00000629912 NOL7Q9UMY1 257 aaKnown RBP6.41□□□□□ -1.38
NEK3-211ENST00000629912 KCNJ14Q9UNX9 436 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 CEP131Q9UPN4 1083 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 DAGLAQ9Y4D2 1042 aa6.41□□□□□ -1.38
NEK3-211ENST00000629912 DDX60LQ5H9U9 1706 aaKnown RBP6.4□□□□□ -1.38
NEK3-211ENST00000629912 NPM3O75607 178 aaKnown RBP6.4□□□□□ -1.38
NEK3-211ENST00000629912 PLEKHA8P1O95397 391 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 ADCY5O95622 1261 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 BMP15O95972 392 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 TPM3P06753 285 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 TSPY3P0CV98 308 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 TSPY8P0CW00 308 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 SCG2P13521 617 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 PFKFB1P16118 471 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 KRT2P35908 639 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 TRAPPC10P48553 1259 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 ZNF165P49910 485 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 GABPAQ06546 454 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 IQCB1Q15051 598 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 STX1AQ16623 288 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 ANO6Q4KMQ2 910 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 STRIP1Q5VSL9 837 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 GALNT17Q6IS24 598 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 SHC4Q6S5L8 630 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 POTEAQ6S8J7 498 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 CMTR1Q8N1G2 835 aaKnown RBP6.4□□□□□ -1.38
NEK3-211ENST00000629912 CERS5Q8N5B7 392 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 KRI1Q8N9T8 703 aaKnown RBP6.4□□□□□ -1.38
NEK3-211ENST00000629912 PNMA1Q8ND90 353 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 TNFRSF25Q93038 417 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 ZNF622Q969S3 477 aaKnown RBP eCLIP6.4□□□□□ -1.38
NEK3-211ENST00000629912 SHISA4Q96DD7 197 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 TMEM47Q9BQJ4 181 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 BPIFA3Q9BQP9 254 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 BRMS1Q9HCU9 246 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 CABP5Q9NP86 173 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 STK32BQ9NY57 414 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 KIAA1468Q9P260 1216 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 USP25Q9UHP3 1055 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 SRPRBQ9Y5M8 271 aaKnown RBP6.4□□□□□ -1.38
NEK3-211ENST00000629912 SLX4Q8IY92 1834 aa6.4□□□□□ -1.38
NEK3-211ENST00000629912 FLT1P17948 1338 aa6.4□□□□□ -1.39
NEK3-211ENST00000629912 MYO3BQ8WXR4 1341 aa6.4□□□□□ -1.39
NEK3-211ENST00000629912 CNTNAP5Q8WYK1 1306 aa6.4□□□□□ -1.39
NEK3-211ENST00000629912 BAZ2BQ9UIF8 2168 aaKnown RBP6.4□□□□□ -1.39
NEK3-211ENST00000629912 COL11A2P13942 1736 aaPredicted RBP6.39□□□□□ -1.39
NEK3-211ENST00000629912 USP17L3A6NCW0 530 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 USP17L4A6NCW7 530 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 TRIM75PA6NK02 468 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 G3V3G9 751 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 AP5Z1O43299 807 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 ZNF500O60304 480 aaPredicted RBP6.39□□□□□ -1.39
NEK3-211ENST00000629912 TOP1P11387 765 aaKnown RBP6.39□□□□□ -1.39
NEK3-211ENST00000629912 CALML3P27482 149 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 MARCKSP29966 332 aaPredicted RBP6.39□□□□□ -1.39
NEK3-211ENST00000629912 SYKP43405 635 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 NLRP12P59046 1061 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 NR5A1Q13285 461 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 NPY5RQ15761 445 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 EZH2Q15910 746 aaKnown RBP6.39□□□□□ -1.39
NEK3-211ENST00000629912 DOK7Q18PE1 504 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 DCAF8Q5TAQ9 597 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 APOBEC3HQ6NTF7 200 aaKnown RBP6.39□□□□□ -1.39
NEK3-211ENST00000629912 KANK3Q6NY19 840 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 USP17L1Q7RTZ2 530 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 SUPT20HQ8NEM7 779 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 OXER1Q8TDS5 423 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 TEKT1Q969V4 418 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms