RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 SLC4A4Q9Y6R1 1079 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 USP17L5A8MUK1 530 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 RNF113AO15541 343 aaKnown RBP9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 GPAA1O43292 621 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 ALDH1A1P00352 501 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 PLCG2P16885 1265 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 EN2P19622 333 aaPredicted RBP9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 PSMC4P43686 418 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 BACE1P56817 501 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 COL9A3Q14050 684 aaPredicted RBP9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 RAB3GAP1Q15042 981 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 SH3D19Q5HYK7 790 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 ZMYM1Q5SVZ6 1142 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 C12orf60Q5U649 245 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 PLEKHM2Q8IWE5 1019 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 GPATCH3Q96I76 525 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 WDR18Q9BV38 432 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 CRNKL1Q9BZJ0 848 aaKnown RBP9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 EHD4Q9H223 541 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 PORCNQ9H237 461 aa9.74□□□□□ -0.85
SPTAN1-213ENST00000627809 DNAH12Q6ZR08 3092 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 POLR3DP05423 398 aaPredicted RBP9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 GSPT1P15170 499 aaKnown RBP9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 RASA1P20936 1047 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 CDK8P49336 464 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 RGS19P49795 217 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 TTF1Q15361 905 aaPredicted RBP9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 FOXP4Q8IVH2 680 aaPredicted RBP9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 SPICE1Q8N0Z3 855 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 HOOK2Q96ED9 719 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 ZNF333Q96JL9 665 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 NUP88Q99567 741 aaPredicted RBP9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 DHX36Q9H2U1 1008 aaKnown RBP9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 FBXO28Q9NVF7 368 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 BTBD7Q9P203 1132 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 RBPJLQ9UBG7 517 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 STAP2Q9UGK3 403 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 TTC41PQ6P2S7 1318 aa9.73□□□□□ -0.85
SPTAN1-213ENST00000627809 ERC2O15083 957 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 NMT2O60551 498 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 HLA-DOAP06340 250 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 VCAM1P19320 739 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 CTDSPL2Q05D32 466 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 NMIQ13287 307 aaPredicted RBP9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 ABCB5Q2M3G0 1257 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 CERKLQ49MI3 558 aaPredicted RBP9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 C16orf86Q6ZW13 317 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 APPBP2Q92624 585 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 ARMC5Q96C12 935 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 ERO1AQ96HE7 468 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 TAF6LQ9Y6J9 622 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 ROBO3Q96MS0 1386 aa9.72□□□□□ -0.85
SPTAN1-213ENST00000627809 LRRC37A2A6NM11 1700 aa9.71□□□□□ -0.85
SPTAN1-213ENST00000627809 SPDYE16A6NNV3 312 aaPredicted RBP9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 MINDY4BA8MYZ0 360 aa9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 ASNSP08243 561 aa9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 HERVK_113P62684 666 aa9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 CCL14Q16627 93 aa9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 OTUD7BQ6GQQ9 843 aa9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 PROCA1Q8NCQ7 364 aaPredicted RBP9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 PARK7Q99497 189 aaKnown RBP9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 FSD1Q9BTV5 496 aa9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 ZCCHC17Q9NP64 241 aaKnown RBP9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 SRRDQ9UH36 339 aa9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 MYPNQ86TC9 1320 aa9.71□□□□□ -0.86
SPTAN1-213ENST00000627809 ZNF236Q9UL36 1845 aa9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 RANBP2P49792 3224 aaKnown RBP9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 USP17L10C9JJH3 530 aa9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 MPHOSPH10O00566 681 aaKnown RBP9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 IGSF3O75054 1194 aa9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 GLRX3O76003 335 aaKnown RBP9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 FLT3LGP49771 235 aa9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 FAM47AQ5JRC9 791 aa9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 PAGR1Q9BTK6 254 aa9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 UNC93B1Q9H1C4 597 aa9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 RPAP3Q9H6T3 665 aaPredicted RBP9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 FLRT1Q9NZU1 646 aa9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 GJD2Q9UKL4 321 aa9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 DDX49Q9Y6V7 483 aaKnown RBP9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 MYH6P13533 1939 aa9.7□□□□□ -0.86
SPTAN1-213ENST00000627809 IGKV6D-41A0A0C4DH26 115 aa9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 FMNL1O95466 1100 aaPredicted RBP9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 EEF2P13639 858 aaKnown RBP9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 SAMD1Q6SPF0 538 aaPredicted RBP9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 FASTKD5Q7L8L6 764 aaKnown RBP9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 TTC6Q86TZ1 520 aa9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 TBC1D10CQ8IV04 446 aa9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 IFNL3Q8IZI9 196 aa9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 LRRC47Q8N1G4 583 aaKnown RBP9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 SMCR8Q8TEV9 937 aaPredicted RBP9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 ATG4CQ96DT6 458 aa9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 C12orf42Q96LP6 360 aa9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 OSBPL3Q9H4L5 887 aa9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 BAZ2BQ9UIF8 2168 aaKnown RBP9.69□□□□□ -0.86
SPTAN1-213ENST00000627809 HOXA7P31268 230 aaPredicted RBP9.68□□□□□ -0.86
SPTAN1-213ENST00000627809 MNX1P50219 401 aaPredicted RBP9.68□□□□□ -0.86
SPTAN1-213ENST00000627809 HAND2P61296 217 aa9.68□□□□□ -0.86
SPTAN1-213ENST00000627809 ICA1Q05084 483 aa9.68□□□□□ -0.86
SPTAN1-213ENST00000627809 FAM110CQ1W6H9 321 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms