RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 USP17L12C9JPN9 530 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 USP17L21D6R901 530 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 CEP104O60308 925 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 IRX5P78411 483 aaPredicted RBP14.23□□□□□ -0.13
SCN8A-209ENST00000627620 ME3Q16798 604 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 MFSD14BQ5SR56 506 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 DCUN1D2Q6PH85 259 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 TRMT44Q8IYL2 757 aaKnown RBP14.23□□□□□ -0.13
SCN8A-209ENST00000627620 ATP10AO60312 1499 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 BCRP11274 1271 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 DNM2P50570 870 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 INTS8Q75QN2 995 aaKnown RBP14.22□□□□□ -0.13
SCN8A-209ENST00000627620 IFT20Q8IY31 132 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 STIM2Q9P246 746 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 SERTAD1Q9UHV2 236 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 ARHGAP6O43182 974 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 GIGYF1O75420 1035 aaPredicted RBP14.22□□□□□ -0.13
SCN8A-209ENST00000627620 SLAIN2Q9P270 581 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 ADAMTS12P58397 1594 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 ABCC2Q92887 1545 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 KRT19P08727 400 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 MTX1Q13505 466 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 PNOCQ13519 176 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 KCNQ3O43525 872 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 FLOT1O75955 427 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 CD19P15391 556 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 GEN1Q17RS7 908 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 SFMBT2Q5VUG0 894 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 TPH2Q8IWU9 490 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 USP21Q9UK80 565 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 KIF24Q5T7B8 1368 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 PPIP5K2O43314 1243 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 STK10O94804 968 aaKnown RBP14.22□□□□□ -0.13
SCN8A-209ENST00000627620 CCDC84Q86UT8 332 aaPredicted RBP14.22□□□□□ -0.13
SCN8A-209ENST00000627620 NT5C3AQ9H0P0 336 aa14.22□□□□□ -0.13
SCN8A-209ENST00000627620 PLEKHG3A1L390 1219 aa14.21□□□□□ -0.13
SCN8A-209ENST00000627620 AFAP1L1Q8TED9 768 aa14.21□□□□□ -0.13
SCN8A-209ENST00000627620 SLF1Q9BQI6 1058 aa14.21□□□□□ -0.13
SCN8A-209ENST00000627620 USP44Q9H0E7 712 aa14.21□□□□□ -0.13
SCN8A-209ENST00000627620 ASIC3Q9UHC3 531 aa14.21□□□□□ -0.13
SCN8A-209ENST00000627620 KDRP35968 1356 aa14.21□□□□□ -0.13
SCN8A-209ENST00000627620 ZNF445P59923 1031 aa14.21□□□□□ -0.13
SCN8A-209ENST00000627620 MYSM1Q5VVJ2 828 aa14.21□□□□□ -0.13
SCN8A-209ENST00000627620 TEKT1Q969V4 418 aa14.21□□□□□ -0.13
SCN8A-209ENST00000627620 ZSCAN10Q96SZ4 725 aaPredicted RBP14.21□□□□□ -0.13
SCN8A-209ENST00000627620 KLHL7Q8IXQ5 586 aa14.21□□□□□ -0.14
SCN8A-209ENST00000627620 CMTR1Q8N1G2 835 aaKnown RBP14.21□□□□□ -0.14
SCN8A-209ENST00000627620 CCT6BQ92526 530 aa14.21□□□□□ -0.14
SCN8A-209ENST00000627620 PSMB7Q99436 277 aa14.21□□□□□ -0.14
SCN8A-209ENST00000627620 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.21□□□□□ -0.14
SCN8A-209ENST00000627620 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.21□□□□□ -0.14
SCN8A-209ENST00000627620 CRCPO75575 148 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 APBA3O96018 575 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 TPD52P55327 224 aaPredicted RBP14.2□□□□□ -0.14
SCN8A-209ENST00000627620 DAAM2Q86T65 1068 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 IFNL3Q8IZI9 196 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 SSH3Q8TE77 659 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 ATP8A2Q9NTI2 1148 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 LMBRD1Q9NUN5 540 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 SH3BP5O60239 455 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 PHKG2P15735 406 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 IRX3P78415 501 aaPredicted RBP14.2□□□□□ -0.14
SCN8A-209ENST00000627620 ZNF274Q96GC6 653 aaPredicted RBP14.2□□□□□ -0.14
SCN8A-209ENST00000627620 FAM207AQ9NSI2 230 aaPredicted RBP14.2□□□□□ -0.14
SCN8A-209ENST00000627620 A0A0D9SFI3 127 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 GAS7O60861 476 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 GYG1P46976 350 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 HAUS7Q99871 368 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 PTPRTO14522 1441 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 C17orf53Q8N3J3 647 aaPredicted RBP14.2□□□□□ -0.14
SCN8A-209ENST00000627620 IL17REQ8NFR9 667 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 CHURC1Q8WUH1 139 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 ATP7AQ04656 1500 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 RIOK3O14730 519 aaKnown RBP14.2□□□□□ -0.14
SCN8A-209ENST00000627620 IGSF3O75054 1194 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 ARHGAP44Q17R89 818 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 NLRX1Q86UT6 975 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 SYCE1Q8N0S2 351 aa14.2□□□□□ -0.14
SCN8A-209ENST00000627620 ABCC4O15439 1325 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 DNMT1P26358 1616 aaKnown RBP14.19□□□□□ -0.14
SCN8A-209ENST00000627620 ITIH3Q06033 890 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 RDH13Q8NBN7 331 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 CCDC110Q8TBZ0 833 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 EAF2Q96CJ1 260 aaPredicted RBP14.19□□□□□ -0.14
SCN8A-209ENST00000627620 PTH1RQ03431 593 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 RPS6KA1Q15418 735 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 FYB2Q5VWT5 728 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 ADALQ6DHV7 355 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 TTLL7Q6ZT98 887 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 RRAGAQ7L523 313 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 CFAP43Q8NDM7 1665 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.19□□□□□ -0.14
SCN8A-209ENST00000627620 GMNNO75496 209 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 HSPA1LP34931 641 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 TYW1BQ6NUM6 668 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 PPANQ9NQ55 473 aaKnown RBP14.19□□□□□ -0.14
SCN8A-209ENST00000627620 MYO1AQ9UBC5 1043 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 TNNI1P19237 187 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 MIER3Q7Z3K6 550 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 NLRC4Q9NPP4 1024 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms