RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 TICAM2Q86XR7 235 aa11.42□□□□□ -0.58
LINC01560-202ENST00000624822 IFNL3Q8IZI9 196 aa11.42□□□□□ -0.58
LINC01560-202ENST00000624822 DNAJC18Q9H819 358 aa11.42□□□□□ -0.58
LINC01560-202ENST00000624822 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.42□□□□□ -0.58
LINC01560-202ENST00000624822 CCDC171Q6TFL3 1326 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 MYH4Q9Y623 1939 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 MPHOSPH10O00566 681 aaKnown RBP11.41□□□□□ -0.58
LINC01560-202ENST00000624822 IRF6O14896 467 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 GTF2A2P52657 109 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 PPATQ06203 517 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 PPIL2Q13356 520 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 CERKLQ49MI3 558 aaPredicted RBP11.41□□□□□ -0.58
LINC01560-202ENST00000624822 C12orf60Q5U649 245 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 GIMAP6Q6P9H5 292 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 CCDC84Q86UT8 332 aaPredicted RBP11.41□□□□□ -0.58
LINC01560-202ENST00000624822 KHSRPQ92945 711 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC01560-202ENST00000624822 DYNLL2Q96FJ2 89 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 EPB41L4AQ9HCS5 686 aaPredicted RBP11.41□□□□□ -0.58
LINC01560-202ENST00000624822 CABP5Q9NP86 173 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 TAOK2Q9UL54 1235 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 ZHX2Q9Y6X8 837 aa11.41□□□□□ -0.58
LINC01560-202ENST00000624822 CCL15-CCL14A0A0B4J2E2 113 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 ASNSP08243 561 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 PTPRAP18433 802 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 SNAPC2Q13487 334 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 RRP1BQ14684 758 aaKnown RBP11.4□□□□□ -0.58
LINC01560-202ENST00000624822 CCL15Q16663 113 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 ARSIQ5FYB1 569 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 ZNF589Q86UQ0 364 aaPredicted RBP11.4□□□□□ -0.58
LINC01560-202ENST00000624822 METTL16Q86W50 562 aaKnown RBP11.4□□□□□ -0.58
LINC01560-202ENST00000624822 SLC44A5Q8NCS7 719 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 RUFY2Q8WXA3 655 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 AS3MTQ9HBK9 375 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 ZSWIM6Q9HCJ5 1215 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 WBP1LQ9NX94 342 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 SWAP70Q9UH65 585 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 LOC285556D6RIA3 1793 aa11.4□□□□□ -0.58
LINC01560-202ENST00000624822 TRIM75PA6NK02 468 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 USP17L5A8MUK1 530 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 SMIM22K7EJ46 135 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 TRPA1O75762 1119 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 GH2P01242 217 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 CETPP11597 493 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 SHMT1P34896 483 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 CDK8P49336 464 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 INHBEP58166 350 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 RAB3GAP1Q15042 981 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 ABCB5Q2M3G0 1257 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 SBK1Q52WX2 424 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 VPS53Q5VIR6 699 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 OTUD7BQ6GQQ9 843 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 TATDN1Q6P1N9 297 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 MKNK2Q9HBH9 465 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 TSKSQ9UJT2 592 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 ZBTB21Q9ULJ3 1066 aa11.39□□□□□ -0.59
LINC01560-202ENST00000624822 SLC3A2P08195 630 aaKnown RBP11.38□□□□□ -0.59
LINC01560-202ENST00000624822 HSPD1P10809 573 aaKnown RBP11.38□□□□□ -0.59
LINC01560-202ENST00000624822 CHMLP26374 656 aa11.38□□□□□ -0.59
LINC01560-202ENST00000624822 TM4SF4P48230 202 aa11.38□□□□□ -0.59
LINC01560-202ENST00000624822 GABPAQ06546 454 aa11.38□□□□□ -0.59
LINC01560-202ENST00000624822 PPARAQ07869 468 aa11.38□□□□□ -0.59
LINC01560-202ENST00000624822 SHROOM1Q2M3G4 852 aaPredicted RBP11.38□□□□□ -0.59
LINC01560-202ENST00000624822 GADL1Q6ZQY3 521 aa11.38□□□□□ -0.59
LINC01560-202ENST00000624822 C16orf86Q6ZW13 317 aa11.38□□□□□ -0.59
LINC01560-202ENST00000624822 GREB1LQ9C091 1923 aaPredicted RBP11.38□□□□□ -0.59
LINC01560-202ENST00000624822 CASP8AP2Q9UKL3 1982 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 RAD50Q92878 1312 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 FOXN1O15353 648 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 CA12O43570 354 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 CTDSPL2Q05D32 466 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 PDE4BQ07343 736 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 SPP2Q13103 211 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 BMP2KLQ5H9B9 411 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 ZNF280CQ8ND82 737 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 FEZ1Q99689 392 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 TBC1D2Q9BYX2 928 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 ZNF287Q9HBT7 754 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 TOMM22Q9NS69 142 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 GINM1Q9NU53 330 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 RNF186Q9NXI6 227 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 KCNH4Q9UQ05 1017 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 AFG3L2Q9Y4W6 797 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 ROBO3Q96MS0 1386 aa11.37□□□□□ -0.59
LINC01560-202ENST00000624822 IGF2BP3O00425 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC01560-202ENST00000624822 CXCL11O14625 94 aa11.36□□□□□ -0.59
LINC01560-202ENST00000624822 FOXP2O15409 715 aa11.36□□□□□ -0.59
LINC01560-202ENST00000624822 PRDM1O75626 825 aa11.36□□□□□ -0.59
LINC01560-202ENST00000624822 ALDH1A1P00352 501 aa11.36□□□□□ -0.59
LINC01560-202ENST00000624822 FGAP02671 866 aa11.36□□□□□ -0.59
LINC01560-202ENST00000624822 AKR1B1P15121 316 aa11.36□□□□□ -0.59
LINC01560-202ENST00000624822 CTCFP49711 727 aaPredicted RBP11.36□□□□□ -0.59
LINC01560-202ENST00000624822 JAG1P78504 1218 aa11.36□□□□□ -0.59
LINC01560-202ENST00000624822 SEPT2Q15019 361 aa11.36□□□□□ -0.59
LINC01560-202ENST00000624822 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
LINC01560-202ENST00000624822 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
LINC01560-202ENST00000624822 ZNF444Q8N0Y2 327 aaPredicted RBP11.36□□□□□ -0.59
LINC01560-202ENST00000624822 BRI3BPQ8WY22 251 aa11.36□□□□□ -0.59
LINC01560-202ENST00000624822 SAGE1Q9NXZ1 904 aa11.36□□□□□ -0.59
LINC01560-202ENST00000624822 PCNTO95613 3336 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 A0A0G2JLL6 359 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms