RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 MYH7P12883 1935 aa15.97■□□□□ 0.15
LDB3-209ENST00000623056 SEMA3EO15041 775 aa15.97■□□□□ 0.15
LDB3-209ENST00000623056 CPP00450 1065 aa15.97■□□□□ 0.15
LDB3-209ENST00000623056 USP14P54578 494 aa15.97■□□□□ 0.15
LDB3-209ENST00000623056 TTLL7Q6ZT98 887 aa15.97■□□□□ 0.15
LDB3-209ENST00000623056 WASF1Q92558 559 aa15.97■□□□□ 0.15
LDB3-209ENST00000623056 ABHD10Q9NUJ1 306 aa15.97■□□□□ 0.15
LDB3-209ENST00000623056 GEMIN8Q9NWZ8 242 aaKnown RBP15.97■□□□□ 0.15
LDB3-209ENST00000623056 TNS3Q68CZ2 1445 aa15.97■□□□□ 0.15
LDB3-209ENST00000623056 LAMB4A4D0S4 1761 aa15.97■□□□□ 0.15
LDB3-209ENST00000623056 MYO5AQ9Y4I1 1855 aaKnown RBP15.96■□□□□ 0.15
LDB3-209ENST00000623056 NBPF26B4DH59 902 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 RNF225M0QZC1 329 aaPredicted RBP15.96■□□□□ 0.15
LDB3-209ENST00000623056 APPP05067 770 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 DNAJC21Q5F1R6 531 aaKnown RBP15.96■□□□□ 0.15
LDB3-209ENST00000623056 NBPF14Q5TI25 921 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 NBPF10Q6P3W6 841 aaKnown RBP15.96■□□□□ 0.15
LDB3-209ENST00000623056 CYP26C1Q6V0L0 522 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 SMYD4Q8IYR2 804 aaPredicted RBP15.96■□□□□ 0.15
LDB3-209ENST00000623056 NBPF15Q8N660 670 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 SLF1Q9BQI6 1058 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 FOXP1Q9H334 677 aaPredicted RBP15.96■□□□□ 0.15
LDB3-209ENST00000623056 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
LDB3-209ENST00000623056 A0A087X0B3 334 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 ATP2B1P20020 1258 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 CASP1P29466 404 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 CDC25AP30304 524 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 CCT6AP40227 531 aaKnown RBP15.96■□□□□ 0.15
LDB3-209ENST00000623056 AFMP43652 599 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 NR5A1Q13285 461 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 DRC1Q96MC2 740 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.96■□□□□ 0.15
LDB3-209ENST00000623056 SLC12A7Q9Y666 1083 aa15.96■□□□□ 0.15
LDB3-209ENST00000623056 ZC3H4Q9UPT8 1303 aaKnown RBP15.96■□□□□ 0.15
LDB3-209ENST00000623056 PPP1R3GB7ZBB8 358 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 IFNAR1P17181 557 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 TRAPPC11Q7Z392 1133 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 INCENPQ9NQS7 918 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 STRN4Q9NRL3 753 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 CEP131Q9UPN4 1083 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 ABCC12Q96J65 1359 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 ADD2P35612 726 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 TADA2BQ86TJ2 420 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 IFNL2Q8IZJ0 200 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 RIN2Q8WYP3 895 aaPredicted RBP15.95■□□□□ 0.14
LDB3-209ENST00000623056 PAGE5Q96GU1 130 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 TRIM10Q9UDY6 481 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 SPATA31A3Q5VYP0 1347 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 CDHR2Q9BYE9 1310 aa15.95■□□□□ 0.14
LDB3-209ENST00000623056 TATP17735 454 aaPredicted RBP15.94■□□□□ 0.14
LDB3-209ENST00000623056 KRT31Q15323 416 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 MAP9Q49MG5 647 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 SH3RF1Q7Z6J0 888 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 SMARCC1Q92922 1105 aaPredicted RBP15.94■□□□□ 0.14
LDB3-209ENST00000623056 NUP88Q99567 741 aaPredicted RBP15.94■□□□□ 0.14
LDB3-209ENST00000623056 TOMM22Q9NS69 142 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 NLRP2Q9NX02 1062 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 HDAC6Q9UBN7 1215 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 A0A087WUV0 522 aaPredicted RBP15.94■□□□□ 0.14
LDB3-209ENST00000623056 MCM3P25205 808 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 LIFRP42702 1097 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 DPYDQ12882 1025 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 STIM1Q13586 685 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 SKIDA1Q1XH10 827 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 CCDC57Q2TAC2 916 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 COG1Q8WTW3 980 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 EPSTI1Q96J88 318 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 MMS19Q96T76 1030 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 GUCA1BQ9UMX6 200 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 TBC1D2BQ9UPU7 963 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 CTNND2Q9UQB3 1225 aa15.94■□□□□ 0.14
LDB3-209ENST00000623056 REXO2Q9Y3B8 237 aaKnown RBP15.94■□□□□ 0.14
LDB3-209ENST00000623056 ENC1O14682 589 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 IFIT3O14879 490 aaKnown RBP15.93■□□□□ 0.14
LDB3-209ENST00000623056 N4BP3O15049 544 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 COBLO75128 1261 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 MCAMP43121 646 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 EIF5P55010 431 aaKnown RBP15.93■□□□□ 0.14
LDB3-209ENST00000623056 OXER1Q8TDS5 423 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 DEF6Q9H4E7 631 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 ZBTB3Q9H5J0 574 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 AATFQ9NY61 560 aaKnown RBP eCLIP15.93■□□□□ 0.14
LDB3-209ENST00000623056 LIMA1Q9UHB6 759 aaKnown RBP15.93■□□□□ 0.14
LDB3-209ENST00000623056 GLI3P10071 1580 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 ATRNO75882 1429 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 NUP188Q5SRE5 1749 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 PSMD14O00487 310 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 SHOX2O60902 331 aaPredicted RBP15.93■□□□□ 0.14
LDB3-209ENST00000623056 GGCXP38435 758 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 SUGP1Q8IWZ8 645 aaKnown RBP15.93■□□□□ 0.14
LDB3-209ENST00000623056 TRIM22Q8IYM9 498 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 DCAF5Q96JK2 942 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 GSDMAQ96QA5 445 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 VPS16Q9H269 839 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 CABP5Q9NP86 173 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 ZSWIM5Q9P217 1185 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 SLAIN2Q9P270 581 aa15.93■□□□□ 0.14
LDB3-209ENST00000623056 MEGF6O75095 1541 aa15.92■□□□□ 0.14
LDB3-209ENST00000623056 KRT9P35527 623 aa15.92■□□□□ 0.14
LDB3-209ENST00000623056 MMS22LQ6ZRQ5 1243 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms