RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 REXO1Q8N1G1 1221 aaKnown RBP10.35□□□□□ -0.75
HDAC9-229ENST00000622668 METTL13Q8N6R0 699 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 PLIN2Q99541 437 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 TRIM6Q9C030 488 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-229ENST00000622668 SUGT1Q9Y2Z0 365 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 ZNF521Q96K83 1311 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 CSF1RP07333 972 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 ANAPC15P60006 121 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 POLA2Q14181 598 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 SLFNL1Q499Z3 407 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 MAEAQ7L5Y9 396 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 PSTPIP2Q9H939 334 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 BCL9LQ86UU0 1499 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 TRPA1O75762 1119 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 KIF20AO95235 890 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 IGBP1P78318 339 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 ZMYM1Q5SVZ6 1142 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 PIK3AP1Q6ZUJ8 805 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 RUFY3Q7L099 469 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 PRMT6Q96LA8 375 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-229ENST00000622668 SMCO2A6NFE2 343 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 DEXIO95424 95 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 CAVIN1Q6NZI2 390 aaKnown RBP10.34□□□□□ -0.75
HDAC9-229ENST00000622668 CNNM3Q8NE01 707 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 TMX3Q96JJ7 454 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 SCAND2PQ9GZW5 306 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-229ENST00000622668 SIGLEC1Q9BZZ2 1709 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 RFX1P22670 979 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 MARCKSP29966 332 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-229ENST00000622668 TAF12Q16514 161 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 USP17L2Q6R6M4 530 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 TRMT2AQ8IZ69 625 aaKnown RBP10.34□□□□□ -0.75
HDAC9-229ENST00000622668 PLCD3Q8N3E9 789 aa10.34□□□□□ -0.75
HDAC9-229ENST00000622668 HERC5Q9UII4 1024 aaKnown RBP10.34□□□□□ -0.75
HDAC9-229ENST00000622668 ABCC12Q96J65 1359 aa10.33□□□□□ -0.75
HDAC9-229ENST00000622668 GOLGA6L3A6NEY3 463 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 MSNP26038 577 aaKnown RBP10.33□□□□□ -0.76
HDAC9-229ENST00000622668 TXKP42681 527 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 DEFB115Q30KQ5 88 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 TXNRD3Q86VQ6 643 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 CCDC150Q8NCX0 1101 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.33□□□□□ -0.76
HDAC9-229ENST00000622668 STX6O43752 255 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 CYP2B6P20813 491 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 DNM2P50570 870 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 FAM83BQ5T0W9 1011 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 RTEL1Q9NZ71 1219 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 DACH1Q9UI36 760 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 ADM5C9JUS6 153 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 M0R2C6 588 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 MBD3O95983 291 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 SNAP25P60880 206 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 MTMR2Q13614 643 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 NCAPH2Q6IBW4 605 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 CDC42EP5Q6NZY7 148 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 FAM151AQ8WW52 585 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 NMRK2Q9NPI5 230 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 VPS54Q9P1Q0 977 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 ONECUT3O60422 494 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-229ENST00000622668 CCNT1O60563 726 aaKnown RBP10.33□□□□□ -0.76
HDAC9-229ENST00000622668 RPS6KB1P23443 525 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 NONOQ15233 471 aaKnown RBP eCLIP10.33□□□□□ -0.76
HDAC9-229ENST00000622668 ZNF174Q15697 407 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 SNRNP48Q6IEG0 339 aaKnown RBP10.33□□□□□ -0.76
HDAC9-229ENST00000622668 DTHD1Q6ZMT9 781 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 PARK7Q99497 189 aaKnown RBP10.33□□□□□ -0.76
HDAC9-229ENST00000622668 TSG101Q99816 390 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 SUGCTQ9HAC7 445 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 SERPINA10Q9UK55 444 aa10.33□□□□□ -0.76
HDAC9-229ENST00000622668 PHACTR2O75167 634 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 BMP15O95972 392 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 MTX1Q13505 466 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 RABL6Q3YEC7 729 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-229ENST00000622668 CHADLQ6NUI6 762 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 ZKSCAN4Q969J2 545 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-229ENST00000622668 AKT1S1Q96B36 256 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 MMRN2Q9H8L6 949 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 GDPD2Q9HCC8 539 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 CCDC169A6NNP5 214 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 DKC1O60832 514 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC9-229ENST00000622668 GAS7O60861 476 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 FAM13AO94988 1023 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 CETPP11597 493 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 STAT6P42226 847 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 PTH1RQ03431 593 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 FSIP1Q8NA03 581 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 TDRD7Q8NHU6 1098 aaKnown RBP10.32□□□□□ -0.76
HDAC9-229ENST00000622668 RBM46Q8TBY0 533 aaKnown RBP10.32□□□□□ -0.76
HDAC9-229ENST00000622668 DCP1AQ9NPI6 582 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-229ENST00000622668 KIAA1210Q9ULL0 1709 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 LPXNO60711 386 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 SERPINC1P01008 464 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 MFSD14CQ5VZR4 134 aa10.32□□□□□ -0.76
HDAC9-229ENST00000622668 GPKOWQ92917 476 aaPredicted RBP eCLIP10.32□□□□□ -0.76
HDAC9-229ENST00000622668 STRBPQ96SI9 672 aaKnown RBP10.32□□□□□ -0.76
HDAC9-229ENST00000622668 TM4SF1P30408 202 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 HHIPL2Q6UWX4 724 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 PROM2Q8N271 834 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 FANCBQ8NB91 859 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 CCDC102AQ96A19 550 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms