RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	APP	P05067	770 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	INHA	P05111	366 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	VCAM1	P19320	739 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	CYP2B6	P20813	491 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	TTF1	Q15361	905 aa	Predicted RBP	5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	CCL14	Q16627	93 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	CERKL	Q49MI3	558 aa	Predicted RBP	5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	PI4K2B	Q8TCG2	481 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	DIS3L	Q8TF46	1054 aa	Known RBP	5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	TANGO6	Q9C0B7	1094 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	RPAP3	Q9H6T3	665 aa	Predicted RBP	5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	DCTPP1	Q9H773	170 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	CWC22	Q9HCG8	908 aa	Known RBP	5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	ECHDC1	Q9NTX5	307 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	FBXO28	Q9NVF7	368 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	HERC5	Q9UII4	1024 aa	Known RBP	5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	SERPINB13	Q9UIV8	391 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	LAMA3	Q16787	3333 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	UNCX	A6NJT0	531 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	USP17L10	C9JJH3	530 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	GPAA1	O43292	621 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	ADCY3	O60266	1144 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	TBC1D12	O60347	775 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	CNMD	O75829	334 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	IGHD	P01880	384 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	MYCN	P04198	464 aa	Predicted RBP	5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	ASNS	P08243	561 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	CCL5	P13501	91 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	MX1	P20591	662 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	GRK4	P32298	578 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	TDO2	P48775	406 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	CDK8	P49336	464 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	FCGRT	P55899	365 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	BACE1	P56817	501 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	SNAP25	P60880	206 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	HERVK_113	P62684	666 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	MAP3K10	Q02779	954 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	ICA1	Q05084	483 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	CTDSPL2	Q05D32	466 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	PLS1	Q14651	629 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171		Q3C1V9	767 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	FAM47A	Q5JRC9	791 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	VPS53	Q5VIR6	699 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	ANO1	Q5XXA6	986 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	CTR9	Q6PD62	1173 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	FASTKD5	Q7L8L6	764 aa	Known RBP	5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	LRRC47	Q8N1G4	583 aa	Known RBP	5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	ATG4C	Q96DT6	458 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	FAM227B	Q96M60	508 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	RNF208	Q9H0X6	261 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	DHX36	Q9H2U1	1008 aa	Known RBP	5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	AS3MT	Q9HBK9	375 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	BTBD7	Q9P203	1132 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	TACC3	Q9Y6A5	838 aa		5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	DDX49	Q9Y6V7	483 aa	Known RBP	5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171	LAMA2	P24043	3122 aa	Known RBP	5.37	□□□□□ -1.55
LINC00649-219	ENST00000622171		A0A0D9SFI3	127 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	SPDYE16	A6NNV3	312 aa	Predicted RBP	5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	GSG1L2	A8MUP6	293 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	TRIM6-TRIM34	B2RNG4	842 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	RNF113A	O15541	343 aa	Known RBP	5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	NMT2	O60551	498 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	NPM3	O75607	178 aa	Known RBP	5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	HAND2	P61296	217 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	ERVK-9	P63128	1117 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	ERVK-24	P63145	666 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	GABPA	Q06546	454 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	NMI	Q13287	307 aa	Predicted RBP	5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	PKN2	Q16513	984 aa	Known RBP	5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	NOM1	Q5C9Z4	860 aa	Known RBP	5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	FAM83B	Q5T0W9	1011 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	TATDN1	Q6P1N9	297 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	TTC6	Q86TZ1	520 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	FOXP4	Q8IVH2	680 aa	Predicted RBP	5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	KBTBD3	Q8NAB2	608 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	PROCA1	Q8NCQ7	364 aa	Predicted RBP	5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	NKX2-3	Q8TAU0	364 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	TRIB2	Q92519	343 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	RILPL2	Q969X0	211 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	LENG1	Q96BZ8	264 aa	Predicted RBP	5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	ARMC5	Q96C12	935 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	GPATCH3	Q96I76	525 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	DEFB118	Q96PH6	123 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	STRBP	Q96SI9	672 aa	Known RBP	5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	TMEM106C	Q9BVX2	250 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	CABP5	Q9NP86	173 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	PNMA3	Q9UL41	463 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	LRRC37A2	A6NM11	1700 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	DOCK5	Q9H7D0	1870 aa		5.36	□□□□□ -1.55
LINC00649-219	ENST00000622171	SALL3	Q9BXA9	1300 aa		5.35	□□□□□ -1.55
LINC00649-219	ENST00000622171	ZBTB22	O15209	634 aa		5.35	□□□□□ -1.55
LINC00649-219	ENST00000622171	FOXP2	O15409	715 aa		5.35	□□□□□ -1.55
LINC00649-219	ENST00000622171	FLOT1	O75955	427 aa		5.35	□□□□□ -1.55
LINC00649-219	ENST00000622171	EEF2	P13639	858 aa	Known RBP	5.35	□□□□□ -1.55
LINC00649-219	ENST00000622171	RASA1	P20936	1047 aa		5.35	□□□□□ -1.55
LINC00649-219	ENST00000622171	PTGS1	P23219	599 aa		5.35	□□□□□ -1.55
LINC00649-219	ENST00000622171	CCND3	P30281	292 aa	Predicted RBP	5.35	□□□□□ -1.55
LINC00649-219	ENST00000622171	RGS19	P49795	217 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms