RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 N4BP3O15049 544 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 ZSCAN26Q16670 478 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 JAKMIP3Q5VZ66 844 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 SRGAP1Q7Z6B7 1085 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 NUP88Q99567 741 aaPredicted RBP17.9■□□□□ 0.46
NPHP4-211ENST00000622020 KRT23Q9C075 422 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 ABCB6Q9NP58 842 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 TAB2Q9NYJ8 693 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 ZBTB1Q9Y2K1 713 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 TMEM94Q12767 1356 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 PLEKHA8P1O95397 391 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 APTXQ7Z2E3 356 aaKnown RBP17.9■□□□□ 0.46
NPHP4-211ENST00000622020 FBXO3Q9UK99 471 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 MAP3K15Q6ZN16 1313 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 ENC1O14682 589 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 STARD3NLO95772 234 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 GYPCP04921 128 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 PUM3Q15397 648 aaKnown RBP17.9■□□□□ 0.46
NPHP4-211ENST00000622020 NT5DC1Q5TFE4 455 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 SPATA1Q5VX52 437 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 NCAPH2Q6IBW4 605 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 RGS22Q8NE09 1264 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 LCMT1Q9UIC8 334 aa17.9■□□□□ 0.46
NPHP4-211ENST00000622020 TRPM3Q9HCF6 1732 aaPredicted RBP17.89■□□□□ 0.46
NPHP4-211ENST00000622020 EVX2Q03828 476 aa17.89■□□□□ 0.45
NPHP4-211ENST00000622020 GPS2Q13227 327 aa17.89■□□□□ 0.45
NPHP4-211ENST00000622020 RRAGBQ5VZM2 374 aa17.89■□□□□ 0.45
NPHP4-211ENST00000622020 ADD3Q9UEY8 706 aaKnown RBP17.89■□□□□ 0.45
NPHP4-211ENST00000622020 TNKSO95271 1327 aa17.89■□□□□ 0.45
NPHP4-211ENST00000622020 TRIM66O15016 1216 aa17.89■□□□□ 0.45
NPHP4-211ENST00000622020 ADGRA1Q86SQ6 560 aa17.89■□□□□ 0.45
NPHP4-211ENST00000622020 LPIN2Q92539 896 aa17.89■□□□□ 0.45
NPHP4-211ENST00000622020 CCDC102AQ96A19 550 aa17.89■□□□□ 0.45
NPHP4-211ENST00000622020 NACAP1Q9BZK3 213 aa17.89■□□□□ 0.45
NPHP4-211ENST00000622020 WDR17Q8IZU2 1322 aa17.89■□□□□ 0.45
NPHP4-211ENST00000622020 C10orf67Q8IYJ2 551 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 TRIM34Q9BYJ4 488 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 CNNM2Q9H8M5 875 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 CDC23Q9UJX2 597 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 GUCA1BQ9UMX6 200 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 MFAP3LO75121 409 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 TRIM28Q13263 835 aaKnown RBP17.88■□□□□ 0.45
NPHP4-211ENST00000622020 FILIP1LQ4L180 1135 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 GPIHBP1Q8IV16 184 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 TXLNBQ8N3L3 684 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 PLIN2Q99541 437 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 MTMR7Q9Y216 660 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 CTAGE9A4FU28 777 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 ANKRD65E5RJM6 399 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 UQCRFS1P1P0C7P4 283 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 ARID4AP29374 1257 aaPredicted RBP17.88■□□□□ 0.45
NPHP4-211ENST00000622020 VSNL1P62760 191 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 ERVK-24P63145 666 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 NOA1Q8NC60 698 aaKnown RBP17.88■□□□□ 0.45
NPHP4-211ENST00000622020 PLA2G12BQ9BX93 195 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 UBXN6Q9BZV1 441 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 PLEKHA4Q9H4M7 779 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 CEP131Q9UPN4 1083 aa17.88■□□□□ 0.45
NPHP4-211ENST00000622020 KIF1AQ12756 1690 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 GLI3P10071 1580 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 MYO1BO43795 1136 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 VEGFAP15692 232 aaPredicted RBP17.87■□□□□ 0.45
NPHP4-211ENST00000622020 CYP7A1P22680 504 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 PANX2Q96RD6 677 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 CHP1Q99653 195 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 HDAC6Q9UBN7 1215 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 STK36Q9NRP7 1315 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 CCDC151A5D8V7 595 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 ADAMTS3O15072 1205 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 ERCC5P28715 1186 aaPredicted RBP17.87■□□□□ 0.45
NPHP4-211ENST00000622020 MCM7P33993 719 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 PPARAQ07869 468 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 PTGDRQ13258 359 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 CUL4BQ13620 913 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 KANK3Q6NY19 840 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 FAN1Q9Y2M0 1017 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 SPATA31A3Q5VYP0 1347 aa17.87■□□□□ 0.45
NPHP4-211ENST00000622020 PPP1R3GB7ZBB8 358 aa17.86■□□□□ 0.45
NPHP4-211ENST00000622020 NMT2O60551 498 aa17.86■□□□□ 0.45
NPHP4-211ENST00000622020 ZMYND10O75800 440 aa17.86■□□□□ 0.45
NPHP4-211ENST00000622020 SLC5A1P13866 664 aa17.86■□□□□ 0.45
NPHP4-211ENST00000622020 BEND6Q5SZJ8 279 aaPredicted RBP17.86■□□□□ 0.45
NPHP4-211ENST00000622020 CCDC196A0A1B0GTZ2 297 aa17.86■□□□□ 0.45
NPHP4-211ENST00000622020 PDE8AO60658 829 aa17.86■□□□□ 0.45
NPHP4-211ENST00000622020 KRT31Q15323 416 aa17.86■□□□□ 0.45
NPHP4-211ENST00000622020 TRIML1Q8N9V2 468 aa17.86■□□□□ 0.45
NPHP4-211ENST00000622020 KCPQ6ZWJ8 1503 aa17.86■□□□□ 0.45
NPHP4-211ENST00000622020 AKAP11Q9UKA4 1901 aa17.86■□□□□ 0.45
NPHP4-211ENST00000622020 SRGAP2O75044 1071 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 FOXR1Q6PIV2 292 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 CAPZA3Q96KX2 299 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 SLC4A9Q96Q91 983 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 GDAQ9Y2T3 454 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 ATP8B1O43520 1251 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 KRT9P35527 623 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 KRT2P35908 639 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 PKN1Q16512 942 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 PIK3AP1Q6ZUJ8 805 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 TRIM49BA6NDI0 452 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 DYNLL1P63167 89 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms