RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 Q96M66 194 aa8.86□□□□□ -0.99
VPS29-212ENST00000621131 CARS2Q9HA77 564 aaKnown RBP8.86□□□□□ -0.99
VPS29-212ENST00000621131 KBTBD4Q9NVX7 518 aa8.86□□□□□ -0.99
VPS29-212ENST00000621131 ETV3P41162 512 aa8.85□□□□□ -0.99
VPS29-212ENST00000621131 FAM13CQ8NE31 585 aa8.85□□□□□ -0.99
VPS29-212ENST00000621131 FBXO27Q8NI29 283 aa8.85□□□□□ -0.99
VPS29-212ENST00000621131 KCNQ5Q9NR82 932 aa8.85□□□□□ -0.99
VPS29-212ENST00000621131 CTNND2Q9UQB3 1225 aa8.85□□□□□ -0.99
VPS29-212ENST00000621131 MPP2Q14168 576 aa8.84□□□□□ -0.99
VPS29-212ENST00000621131 SNAP47Q5SQN1 464 aa8.84□□□□□ -0.99
VPS29-212ENST00000621131 FBXL19Q6PCT2 694 aa8.84□□□□□ -0.99
VPS29-212ENST00000621131 POU5F2Q8N7G0 328 aa8.84□□□□□ -0.99
VPS29-212ENST00000621131 PIWIL2Q8TC59 973 aaKnown RBP8.84□□□□□ -0.99
VPS29-212ENST00000621131 CYB5D2Q8WUJ1 264 aa8.84□□□□□ -0.99
VPS29-212ENST00000621131 FAM168AQ92567 244 aa8.84□□□□□ -0.99
VPS29-212ENST00000621131 ZSWIM5Q9P217 1185 aa8.84□□□□□ -0.99
VPS29-212ENST00000621131 REV1Q9UBZ9 1251 aa8.84□□□□□ -0.99
VPS29-212ENST00000621131 CHURC1-FNTBB4DL54 471 aa8.83□□□□□ -1
VPS29-212ENST00000621131 YARSP54577 528 aaKnown RBP8.83□□□□□ -1
VPS29-212ENST00000621131 FAM196AQ6ZSG2 479 aa8.83□□□□□ -1
VPS29-212ENST00000621131 SLFN12Q8IYM2 578 aa8.83□□□□□ -1
VPS29-212ENST00000621131 DUSP15Q9H1R2 295 aaPredicted RBP8.83□□□□□ -1
VPS29-212ENST00000621131 GRIN3BO60391 1043 aa8.82□□□□□ -1
VPS29-212ENST00000621131 GREM1O60565 184 aa8.82□□□□□ -1
VPS29-212ENST00000621131 HTR3BO95264 441 aa8.82□□□□□ -1
VPS29-212ENST00000621131 REC114Q7Z4M0 266 aa8.82□□□□□ -1
VPS29-212ENST00000621131 TMEM40Q8WWA1 233 aa8.82□□□□□ -1
VPS29-212ENST00000621131 C19orf73Q9NVV2 129 aa8.82□□□□□ -1
VPS29-212ENST00000621131 WASH4PA8MWX3 477 aa8.81□□□□□ -1
VPS29-212ENST00000621131 DNAJA2O60884 412 aa8.81□□□□□ -1
VPS29-212ENST00000621131 YBX3P16989 372 aaKnown RBP eCLIP8.81□□□□□ -11e-6■■□□□ 11.7
VPS29-212ENST00000621131 EIF4A3P38919 411 aaKnown RBP8.81□□□□□ -1
VPS29-212ENST00000621131 LDLRAD1Q5T700 205 aa8.81□□□□□ -1
VPS29-212ENST00000621131 ROBO2Q9HCK4 1378 aa8.81□□□□□ -1
VPS29-212ENST00000621131 ESR1P03372 595 aa8.8□□□□□ -1
VPS29-212ENST00000621131 SRFP11831 508 aa8.8□□□□□ -1
VPS29-212ENST00000621131 LRRC3Q9BY71 257 aa8.8□□□□□ -1
VPS29-212ENST00000621131 TLR3O15455 904 aaKnown RBP8.79□□□□□ -1
VPS29-212ENST00000621131 GDNFP39905 211 aa8.79□□□□□ -1
VPS29-212ENST00000621131 FYB2Q5VWT5 728 aa8.79□□□□□ -1
VPS29-212ENST00000621131 BAHD1Q8TBE0 780 aaPredicted RBP8.79□□□□□ -1
VPS29-212ENST00000621131 ZNF296Q8WUU4 475 aaPredicted RBP8.79□□□□□ -1
VPS29-212ENST00000621131 LRRN2O75325 713 aa8.78□□□□□ -1
VPS29-212ENST00000621131 ZNF16P17020 682 aaPredicted RBP8.78□□□□□ -1
VPS29-212ENST00000621131 AFMP43652 599 aa8.78□□□□□ -1
VPS29-212ENST00000621131 TMPRSS7Q7RTY8 843 aa8.78□□□□□ -1
VPS29-212ENST00000621131 ZSWIM9Q86XI8 627 aa8.78□□□□□ -1
VPS29-212ENST00000621131 DTWD2Q8NBA8 298 aa8.78□□□□□ -1
VPS29-212ENST00000621131 CCDC74BQ96LY2 380 aa8.78□□□□□ -1
VPS29-212ENST00000621131 GPR62Q9BZJ7 368 aa8.78□□□□□ -1
VPS29-212ENST00000621131 KLHL3Q9UH77 587 aa8.78□□□□□ -1
VPS29-212ENST00000621131 GGT7Q9UJ14 662 aa8.78□□□□□ -1
VPS29-212ENST00000621131 SUPT16HQ9Y5B9 1047 aaKnown RBP8.78□□□□□ -1
VPS29-212ENST00000621131 ZNF503-AS2A6NEH8 195 aa8.77□□□□□ -1.01
VPS29-212ENST00000621131 GAB4Q2WGN9 574 aa8.77□□□□□ -1.01
VPS29-212ENST00000621131 TMCO4Q5TGY1 634 aa8.77□□□□□ -1.01
VPS29-212ENST00000621131 RNF141Q8WVD5 230 aa8.77□□□□□ -1.01
VPS29-212ENST00000621131 VWCEQ96DN2 955 aa8.77□□□□□ -1.01
VPS29-212ENST00000621131 ALPK1Q96QP1 1244 aa8.77□□□□□ -1.01
VPS29-212ENST00000621131 BRMS1Q9HCU9 246 aa8.77□□□□□ -1.01
VPS29-212ENST00000621131 ADAMTS1Q9UHI8 967 aa8.77□□□□□ -1.01
VPS29-212ENST00000621131 SLC22A31A6NKX4 558 aa8.76□□□□□ -1.01
VPS29-212ENST00000621131 ATE1O95260 518 aa8.76□□□□□ -1.01
VPS29-212ENST00000621131 C8AP07357 584 aa8.76□□□□□ -1.01
VPS29-212ENST00000621131 TPP2P29144 1249 aaPredicted RBP8.76□□□□□ -1.01
VPS29-212ENST00000621131 CWF19L2Q2TBE0 894 aaKnown RBP8.76□□□□□ -1.01
VPS29-212ENST00000621131 HS2ST1Q7LGA3 356 aa8.76□□□□□ -1.01
VPS29-212ENST00000621131 KREMEN1Q96MU8 473 aa8.76□□□□□ -1.01
VPS29-212ENST00000621131 KIF2CQ99661 725 aa8.76□□□□□ -1.01
VPS29-212ENST00000621131 TRIT1Q9H3H1 467 aaKnown RBP8.76□□□□□ -1.01
VPS29-212ENST00000621131 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.76□□□□□ -1.01
VPS29-212ENST00000621131 KCNH3Q9ULD8 1083 aa8.76□□□□□ -1.01
VPS29-212ENST00000621131 ZBTB7CA1YPR0 619 aa8.75□□□□□ -1.01
VPS29-212ENST00000621131 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.75□□□□□ -1.01
VPS29-212ENST00000621131 CRKP46108 304 aa8.75□□□□□ -1.01
VPS29-212ENST00000621131 KCNMB1Q16558 191 aa8.75□□□□□ -1.01
VPS29-212ENST00000621131 CREG2Q8IUH2 290 aa8.75□□□□□ -1.01
VPS29-212ENST00000621131 PCDHB14Q9Y5E9 798 aa8.75□□□□□ -1.01
VPS29-212ENST00000621131 DNAJC25-GNG10A0A024R161 153 aa8.74□□□□□ -1.01
VPS29-212ENST00000621131 RGS13O14921 159 aa8.74□□□□□ -1.01
VPS29-212ENST00000621131 TNNI2P48788 182 aa8.74□□□□□ -1.01
VPS29-212ENST00000621131 RALGPS1Q5JS13 557 aa8.74□□□□□ -1.01
VPS29-212ENST00000621131 ZNF648Q5T619 568 aaPredicted RBP8.74□□□□□ -1.01
VPS29-212ENST00000621131 TSPYL5Q86VY4 417 aaPredicted RBP8.74□□□□□ -1.01
VPS29-212ENST00000621131 CCDC120Q96HB5 630 aa8.74□□□□□ -1.01
VPS29-212ENST00000621131 KRTAP9-9Q9BYP9 154 aa8.74□□□□□ -1.01
VPS29-212ENST00000621131 KRTAP9-4Q9BYQ2 154 aa8.74□□□□□ -1.01
VPS29-212ENST00000621131 EHMT1Q9H9B1 1298 aa8.74□□□□□ -1.01
VPS29-212ENST00000621131 GPATCH2Q9NW75 528 aa8.74□□□□□ -1.01
VPS29-212ENST00000621131 SLAMF8Q9P0V8 285 aa8.74□□□□□ -1.01
VPS29-212ENST00000621131 FARP2O94887 1054 aaPredicted RBP8.73□□□□□ -1.01
VPS29-212ENST00000621131 PHACTR4Q8IZ21 702 aa8.73□□□□□ -1.01
VPS29-212ENST00000621131 TMEM87AQ8NBN3 555 aa8.73□□□□□ -1.01
VPS29-212ENST00000621131 KIRREL1Q96J84 757 aa8.73□□□□□ -1.01
VPS29-212ENST00000621131 ASPNQ9BXN1 380 aa8.73□□□□□ -1.01
VPS29-212ENST00000621131 UBP1Q9NZI7 540 aa8.73□□□□□ -1.01
VPS29-212ENST00000621131 GLI1P08151 1106 aa8.72□□□□□ -1.01
VPS29-212ENST00000621131 MESP2Q0VG99 397 aa8.72□□□□□ -1.01
VPS29-212ENST00000621131 TTC6Q86TZ1 520 aa8.72□□□□□ -1.01
VPS29-212ENST00000621131 BCL11AQ9H165 835 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms