RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 ETFBP38117 255 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 ETV3P41162 512 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 CHMP4BP1P59074 171 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 CYP27C1Q4G0S4 372 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 DUSP27Q5VZP5 1158 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 INTS3Q68E01 1043 aaKnown RBP5.5□□□□□ -1.53
MALAT1-216ENST00000620465 OGFOD3Q6PK18 319 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 RUFY4Q6ZNE9 571 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 ZNF765Q7L2R6 523 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 SLC51AQ86UW1 340 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 DNAJB8Q8NHS0 232 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 UBXN4Q92575 508 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 PPP1R1BQ9UD71 204 aaPredicted RBP5.5□□□□□ -1.53
MALAT1-216ENST00000620465 TPX2Q9ULW0 747 aaKnown RBP5.5□□□□□ -1.53
MALAT1-216ENST00000620465 SLC12A7Q9Y666 1083 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 FAM170BA6NMN3 283 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 WDR64B1ANS9 1081 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 UBOX5O94941 541 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 F13BP05160 661 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 FURINP09958 794 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 ACRP10323 421 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 CYP7A1P22680 504 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 CASP7P55210 303 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 TTC6Q86TZ1 520 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 CKAP2LQ8IYA6 745 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 SHKBP1Q8TBC3 707 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 BAHD1Q8TBE0 780 aaPredicted RBP5.49□□□□□ -1.53
MALAT1-216ENST00000620465 PPP1R13LQ8WUF5 828 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 DHX38Q92620 1227 aaKnown RBP5.49□□□□□ -1.53
MALAT1-216ENST00000620465 COX4I2Q96KJ9 171 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 SLC9A7Q96T83 725 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 HIRIP3Q9BW71 556 aaPredicted RBP5.49□□□□□ -1.53
MALAT1-216ENST00000620465 OSBPL1AQ9BXW6 950 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 PRDM5Q9NQX1 630 aaPredicted RBP5.49□□□□□ -1.53
MALAT1-216ENST00000620465 ATG3Q9NT62 314 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 ACTR10Q9NZ32 417 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 GTF2IRD1Q9UHL9 959 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 CEP131Q9UPN4 1083 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 MAPK8IP1Q9UQF2 711 aa5.49□□□□□ -1.53
MALAT1-216ENST00000620465 R3HCC1Q9Y3T6 440 aaKnown RBP5.49□□□□□ -1.53
MALAT1-216ENST00000620465 FAM86C2PA6NEL3 165 aa5.48□□□□□ -1.53
MALAT1-216ENST00000620465 EOMESO95936 686 aa5.48□□□□□ -1.53
MALAT1-216ENST00000620465 RNF4P78317 190 aa5.48□□□□□ -1.53
MALAT1-216ENST00000620465 PPP2R5EQ16537 467 aa5.48□□□□□ -1.53
MALAT1-216ENST00000620465 UNC5AQ6ZN44 842 aa5.48□□□□□ -1.53
MALAT1-216ENST00000620465 CDH24Q86UP0 819 aa5.48□□□□□ -1.53
MALAT1-216ENST00000620465 RIN3Q8TB24 985 aa5.48□□□□□ -1.53
MALAT1-216ENST00000620465 DHRS1Q96LJ7 313 aa5.48□□□□□ -1.53
MALAT1-216ENST00000620465 SLC6A18Q96N87 628 aa5.48□□□□□ -1.53
MALAT1-216ENST00000620465 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.48□□□□□ -1.531e-323■■□□□ 13.1
MALAT1-216ENST00000620465 USP35Q9P2H5 1018 aa5.48□□□□□ -1.53
MALAT1-216ENST00000620465 A0A1W2PQH9 124 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 CLEC3AO75596 197 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 ZYXQ15942 572 aaKnown RBP5.47□□□□□ -1.53
MALAT1-216ENST00000620465 SFRP5Q5T4F7 317 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 NBPF6Q5VWK0 638 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 ANKS3Q6ZW76 656 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 ZDHHC13Q8IUH4 622 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 SHISA5Q8N114 240 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 RNF141Q8WVD5 230 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 NBPF4Q96M43 638 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 KREMEN1Q96MU8 473 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 ASPNQ9BXN1 380 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 SEMA6BQ9H3T3 888 aa5.47□□□□□ -1.53
MALAT1-216ENST00000620465 PHAXQ9H814 394 aaKnown RBP5.47□□□□□ -1.53
MALAT1-216ENST00000620465 GNAT3A8MTJ3 354 aa5.46□□□□□ -1.54
MALAT1-216ENST00000620465 IGF2BP3O00425 579 aaKnown RBP eCLIP5.46□□□□□ -1.54
MALAT1-216ENST00000620465 PMS1P54277 932 aaKnown RBP5.46□□□□□ -1.54
MALAT1-216ENST00000620465 BBS9Q3SYG4 887 aa5.46□□□□□ -1.54
MALAT1-216ENST00000620465 PRSS36Q5K4E3 855 aa5.46□□□□□ -1.54
MALAT1-216ENST00000620465 ARHGAP27Q6ZUM4 889 aa5.46□□□□□ -1.54
MALAT1-216ENST00000620465 C22orf34Q6ZV56 151 aa5.46□□□□□ -1.54
MALAT1-216ENST00000620465 TMEM192Q8IY95 271 aa5.46□□□□□ -1.54
MALAT1-216ENST00000620465 HNRNPLLQ8WVV9 542 aaKnown RBP5.46□□□□□ -1.54
MALAT1-216ENST00000620465 DNAJC2Q99543 621 aaKnown RBP5.46□□□□□ -1.54
MALAT1-216ENST00000620465 TRIM55Q9BYV6 548 aa5.46□□□□□ -1.54
MALAT1-216ENST00000620465 TNKS2Q9H2K2 1166 aa5.46□□□□□ -1.54
MALAT1-216ENST00000620465 PIM2Q9P1W9 311 aa5.46□□□□□ -1.54
MALAT1-216ENST00000620465 SUCOQ9UBS9 1254 aaKnown RBP5.46□□□□□ -1.54
MALAT1-216ENST00000620465 LEMD3Q9Y2U8 911 aa5.46□□□□□ -1.54
MALAT1-216ENST00000620465 KIR3DL1P43629 444 aa5.45□□□□□ -1.54
MALAT1-216ENST00000620465 RBL2Q08999 1139 aa5.45□□□□□ -1.54
MALAT1-216ENST00000620465 FXNQ16595 210 aa5.45□□□□□ -1.54
MALAT1-216ENST00000620465 SOGA3Q5TF21 947 aa5.45□□□□□ -1.54
MALAT1-216ENST00000620465 LARP1BQ659C4 914 aaKnown RBP5.45□□□□□ -1.54
MALAT1-216ENST00000620465 FAM214BQ7L5A3 538 aa5.45□□□□□ -1.54
MALAT1-216ENST00000620465 HEXIM2Q96MH2 286 aaKnown RBP5.45□□□□□ -1.54
MALAT1-216ENST00000620465 MKRN2Q9H000 416 aaKnown RBP5.45□□□□□ -1.54
MALAT1-216ENST00000620465 MKNK2Q9HBH9 465 aa5.45□□□□□ -1.54
MALAT1-216ENST00000620465 ZNF214Q9UL59 606 aaPredicted RBP5.45□□□□□ -1.54
MALAT1-216ENST00000620465 K7ELQ4 463 aaPredicted RBP5.44□□□□□ -1.54
MALAT1-216ENST00000620465 U2SURPO15042 1029 aaKnown RBP5.44□□□□□ -1.54
MALAT1-216ENST00000620465 KLF4O43474 513 aa5.44□□□□□ -1.54
MALAT1-216ENST00000620465 CBX7O95931 251 aa5.44□□□□□ -1.54
MALAT1-216ENST00000620465 ZNF865P0CJ78 1059 aaPredicted RBP5.44□□□□□ -1.54
MALAT1-216ENST00000620465 RAB33AQ14088 237 aa5.44□□□□□ -1.54
MALAT1-216ENST00000620465 NBPF12Q5TAG4 269 aaPredicted RBP5.44□□□□□ -1.54
MALAT1-216ENST00000620465 MFSD4AQ8N468 514 aa5.44□□□□□ -1.54
MALAT1-216ENST00000620465 FAM181AQ8N9Y4 354 aa5.44□□□□□ -1.54
MALAT1-216ENST00000620465 SMARCC1Q92922 1105 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms