RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 UBE2OQ9C0C9 1292 aaKnown RBP26.78■■□□□ 1.88
SRRT-218ENST00000620394 SAP30BPQ9UHR5 308 aaKnown RBP26.78■■□□□ 1.88
SRRT-218ENST00000620394 C19orf81C9J6K1 198 aa26.77■■□□□ 1.88
SRRT-218ENST00000620394 RAB11FIP3O75154 756 aa26.77■■□□□ 1.88
SRRT-218ENST00000620394 MAPK4P31152 587 aa26.77■■□□□ 1.88
SRRT-218ENST00000620394 Q7L0L9 218 aa26.77■■□□□ 1.88
SRRT-218ENST00000620394 GTF3C2Q8WUA4 911 aaPredicted RBP26.77■■□□□ 1.88
SRRT-218ENST00000620394 EHD4Q9H223 541 aa26.77■■□□□ 1.88
SRRT-218ENST00000620394 ZBTB21Q9ULJ3 1066 aa26.77■■□□□ 1.88
SRRT-218ENST00000620394 MYH7P12883 1935 aa26.77■■□□□ 1.88
SRRT-218ENST00000620394 COL6A1P12109 1028 aa26.76■■□□□ 1.87
SRRT-218ENST00000620394 SHROOM1Q2M3G4 852 aaPredicted RBP26.76■■□□□ 1.87
SRRT-218ENST00000620394 TRIM34Q9BYJ4 488 aa26.76■■□□□ 1.87
SRRT-218ENST00000620394 TXNRD2Q9NNW7 524 aa26.76■■□□□ 1.87
SRRT-218ENST00000620394 USP5P45974 858 aa26.75■■□□□ 1.87
SRRT-218ENST00000620394 P2RX7Q99572 595 aaKnown RBP26.75■■□□□ 1.87
SRRT-218ENST00000620394 GDF11O95390 407 aa26.74■■□□□ 1.87
SRRT-218ENST00000620394 IFIT2P09913 472 aaKnown RBP26.74■■□□□ 1.87
SRRT-218ENST00000620394 PDE6AP16499 860 aa26.74■■□□□ 1.87
SRRT-218ENST00000620394 RGS2P41220 211 aa26.74■■□□□ 1.87
SRRT-218ENST00000620394 TATDN1Q6P1N9 297 aa26.74■■□□□ 1.87
SRRT-218ENST00000620394 APBA2Q99767 749 aa26.74■■□□□ 1.87
SRRT-218ENST00000620394 MTMR10Q9NXD2 777 aa26.74■■□□□ 1.87
SRRT-218ENST00000620394 USP17L10C9JJH3 530 aa26.73■■□□□ 1.87
SRRT-218ENST00000620394 APBB1O00213 710 aa26.73■■□□□ 1.87
SRRT-218ENST00000620394 ERVK-9P63128 1117 aa26.73■■□□□ 1.87
SRRT-218ENST00000620394 ERVK-24P63145 666 aa26.73■■□□□ 1.87
SRRT-218ENST00000620394 CACNB2Q08289 660 aaPredicted RBP26.73■■□□□ 1.87
SRRT-218ENST00000620394 CCAR1Q8IX12 1150 aaKnown RBP26.73■■□□□ 1.87
SRRT-218ENST00000620394 SERPINB13Q9UIV8 391 aa26.73■■□□□ 1.87
SRRT-218ENST00000620394 CUL9Q8IWT3 2517 aa26.72■■□□□ 1.87
SRRT-218ENST00000620394 C20orf194Q5TEA3 1177 aa26.72■■□□□ 1.87
SRRT-218ENST00000620394 GPR142Q7Z601 462 aa26.72■■□□□ 1.87
SRRT-218ENST00000620394 USP6NLQ92738 828 aa26.72■■□□□ 1.87
SRRT-218ENST00000620394 TCRBV5S4A2TA0A5A2 114 aa26.71■■□□□ 1.87
SRRT-218ENST00000620394 PEX10O60683 326 aa26.71■■□□□ 1.87
SRRT-218ENST00000620394 SLC9C2Q5TAH2 1124 aa26.71■■□□□ 1.87
SRRT-218ENST00000620394 RBPJLQ9UBG7 517 aa26.71■■□□□ 1.87
SRRT-218ENST00000620394 MAGEB6P1A0A0J9YX57 407 aa26.7■■□□□ 1.86
SRRT-218ENST00000620394 GOLIM4O00461 696 aa26.7■■□□□ 1.86
SRRT-218ENST00000620394 MORN1Q5T089 497 aa26.7■■□□□ 1.86
SRRT-218ENST00000620394 PLEKHH3Q7Z736 793 aa26.7■■□□□ 1.86
SRRT-218ENST00000620394 TTC6Q86TZ1 520 aa26.7■■□□□ 1.86
SRRT-218ENST00000620394 DNAJC2Q99543 621 aaKnown RBP26.7■■□□□ 1.86
SRRT-218ENST00000620394 PAGR1Q9BTK6 254 aa26.7■■□□□ 1.86
SRRT-218ENST00000620394 PORCNQ9H237 461 aa26.7■■□□□ 1.86
SRRT-218ENST00000620394 ZNF532Q9HCE3 1301 aa26.69■■□□□ 1.86
SRRT-218ENST00000620394 CCND3P30281 292 aaPredicted RBP26.69■■□□□ 1.86
SRRT-218ENST00000620394 LRRC26Q2I0M4 334 aa26.69■■□□□ 1.86
SRRT-218ENST00000620394 LHX8Q68G74 356 aa26.69■■□□□ 1.86
SRRT-218ENST00000620394 MYH8P13535 1937 aa26.69■■□□□ 1.86
SRRT-218ENST00000620394 GH2P01242 217 aa26.68■■□□□ 1.86
SRRT-218ENST00000620394 ATP5JP18859 108 aa26.68■■□□□ 1.86
SRRT-218ENST00000620394 CCL14Q16627 93 aa26.68■■□□□ 1.86
SRRT-218ENST00000620394 C12orf42Q96LP6 360 aa26.68■■□□□ 1.86
SRRT-218ENST00000620394 CRNKL1Q9BZJ0 848 aaKnown RBP26.68■■□□□ 1.86
SRRT-218ENST00000620394 CWC22Q9HCG8 908 aaKnown RBP26.68■■□□□ 1.86
SRRT-218ENST00000620394 GABPAQ06546 454 aa26.67■■□□□ 1.86
SRRT-218ENST00000620394 EDC3Q96F86 508 aaKnown RBP26.67■■□□□ 1.86
SRRT-218ENST00000620394 PAG1Q9NWQ8 432 aa26.67■■□□□ 1.86
SRRT-218ENST00000620394 SHMT1P34896 483 aa26.66■■□□□ 1.86
SRRT-218ENST00000620394 PLCD1P51178 756 aa26.66■■□□□ 1.86
SRRT-218ENST00000620394 Q3C1V9 767 aa26.66■■□□□ 1.86
SRRT-218ENST00000620394 USP17L2Q6R6M4 530 aa26.66■■□□□ 1.86
SRRT-218ENST00000620394 EMILIN3Q9NT22 766 aa26.66■■□□□ 1.86
SRRT-218ENST00000620394 LTBP2Q14767 1821 aa26.65■■□□□ 1.86
SRRT-218ENST00000620394 BAZ2AQ9UIF9 1905 aaKnown RBP26.65■■□□□ 1.86
SRRT-218ENST00000620394 CCNA1P78396 465 aa26.65■■□□□ 1.86
SRRT-218ENST00000620394 MDM2Q00987 491 aaPredicted RBP26.65■■□□□ 1.86
SRRT-218ENST00000620394 MAP2K5Q13163 448 aa26.65■■□□□ 1.86
SRRT-218ENST00000620394 HAUS7Q99871 368 aa26.65■■□□□ 1.86
SRRT-218ENST00000620394 GLRX3O76003 335 aaKnown RBP26.64■■□□□ 1.86
SRRT-218ENST00000620394 ADD2P35612 726 aa26.64■■□□□ 1.86
SRRT-218ENST00000620394 CERKLQ49MI3 558 aaPredicted RBP26.64■■□□□ 1.86
SRRT-218ENST00000620394 LCORLQ8N3X6 602 aa26.64■■□□□ 1.86
SRRT-218ENST00000620394 LRRCC1Q9C099 1032 aa26.64■■□□□ 1.86
SRRT-218ENST00000620394 BOLA2Q9H3K6 86 aa26.64■■□□□ 1.86
SRRT-218ENST00000620394 DCP1AQ9NPI6 582 aaPredicted RBP26.64■■□□□ 1.86
SRRT-218ENST00000620394 RABGAP1Q9Y3P9 1069 aa26.64■■□□□ 1.86
SRRT-218ENST00000620394 ABCB5Q2M3G0 1257 aa26.63■■□□□ 1.85
SRRT-218ENST00000620394 MFSD14CQ5VZR4 134 aa26.63■■□□□ 1.85
SRRT-218ENST00000620394 FAM109BQ6ICB4 259 aaPredicted RBP26.63■■□□□ 1.85
SRRT-218ENST00000620394 FEZ1Q99689 392 aa26.63■■□□□ 1.85
SRRT-218ENST00000620394 KIAA1683Q9H0B3 1180 aa26.63■■□□□ 1.85
SRRT-218ENST00000620394 ZNF236Q9UL36 1845 aa26.62■■□□□ 1.85
SRRT-218ENST00000620394 MSCO60682 206 aa26.62■■□□□ 1.85
SRRT-218ENST00000620394 POLR3DP05423 398 aaPredicted RBP26.62■■□□□ 1.85
SRRT-218ENST00000620394 POTEEQ6S8J3 1075 aa26.62■■□□□ 1.85
SRRT-218ENST00000620394 SDR42E1Q8WUS8 393 aa26.62■■□□□ 1.85
SRRT-218ENST00000620394 LBHD1Q9BQE6 289 aaPredicted RBP26.62■■□□□ 1.85
SRRT-218ENST00000620394 MCM9Q9NXL9 1143 aa26.62■■□□□ 1.85
SRRT-218ENST00000620394 A0A0C4DFX4 3053 aa26.62■■□□□ 1.85
SRRT-218ENST00000620394 USP17L15C9J2P7 530 aa26.61■■□□□ 1.85
SRRT-218ENST00000620394 USP17L13C9JLJ4 530 aa26.61■■□□□ 1.85
SRRT-218ENST00000620394 USP17L11C9JVI0 530 aa26.61■■□□□ 1.85
SRRT-218ENST00000620394 USP17L18D6R9N7 530 aa26.61■■□□□ 1.85
SRRT-218ENST00000620394 USP17L22D6RA61 530 aa26.61■■□□□ 1.85
SRRT-218ENST00000620394 USP17L17D6RBQ6 530 aa26.61■■□□□ 1.85
SRRT-218ENST00000620394 USP17L19D6RCP7 530 aa26.61■■□□□ 1.85
SRRT-218ENST00000620394 USP17L20D6RJB6 530 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms