RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 FAM47AQ5JRC9 791 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 GALNT17Q6IS24 598 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 ZNF579Q8NAF0 562 aaKnown RBP11.26□□□□□ -0.61
CDH23-213ENST00000619887 ENGASEQ8NFI3 743 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 NUP88Q99567 741 aaPredicted RBP11.26□□□□□ -0.61
CDH23-213ENST00000619887 ACBD3Q9H3P7 528 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 SYNRGQ9UMZ2 1314 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 SPEF2Q9C093 1822 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 C5P01031 1676 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 KIF28PB7ZC32 967 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 ARHGAP6O43182 974 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 PLCD1P51178 756 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 HSP90AA4PQ58FG1 418 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 FKBP15Q5T1M5 1219 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 VGLL2Q8N8G2 317 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 ZNF397Q8NF99 534 aaPredicted RBP11.25□□□□□ -0.61
CDH23-213ENST00000619887 EPB41L4AQ9HCS5 686 aaPredicted RBP11.25□□□□□ -0.61
CDH23-213ENST00000619887 DNAI1Q9UI46 699 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 KCPQ6ZWJ8 1503 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 PTPREP23469 700 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 PPP1R2P41236 205 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 GNG11P61952 73 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 ITPK1Q13572 414 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 ERO1AQ96HE7 468 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 BAG1Q99933 345 aaPredicted RBP11.25□□□□□ -0.61
CDH23-213ENST00000619887 TANGO6Q9C0B7 1094 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 LAMB4A4D0S4 1761 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 MECOMQ03112 1051 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 TMEM132AQ24JP5 1023 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 ZFYVE27Q5T4F4 411 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 RC3H1Q5TC82 1133 aaKnown RBP11.25□□□□□ -0.61
CDH23-213ENST00000619887 WWC2Q6AWC2 1192 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 PNMA1Q8ND90 353 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 CPLX3Q8WVH0 158 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 TRIM47Q96LD4 638 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.25□□□□□ -0.61
CDH23-213ENST00000619887 EXOC1Q9NV70 894 aa11.25□□□□□ -0.61
CDH23-213ENST00000619887 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
CDH23-213ENST00000619887 CCDC175P0C221 793 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 KRT25Q7Z3Z0 450 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 CNGA4Q8IV77 575 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 ZC3H12CQ9C0D7 883 aaKnown RBP11.24□□□□□ -0.61
CDH23-213ENST00000619887 PKD1L3Q7Z443 1732 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 AKR1B15C9JRZ8 316 aaPredicted RBP11.24□□□□□ -0.61
CDH23-213ENST00000619887 RGL2O15211 777 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 ERCC5P28715 1186 aaPredicted RBP11.24□□□□□ -0.61
CDH23-213ENST00000619887 ZNF771Q7L3S4 317 aaPredicted RBP11.24□□□□□ -0.61
CDH23-213ENST00000619887 BLIDQ8IZY5 108 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 TSG101Q99816 390 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 LUC7LQ9NQ29 371 aaKnown RBP11.24□□□□□ -0.61
CDH23-213ENST00000619887 hCG_1642624A0A1W2PR95 340 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 STX17P56962 302 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 NR5A1Q13285 461 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 TMCO3Q6UWJ1 677 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 SPECC1LQ69YQ0 1117 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 CELF1Q92879 486 aaKnown RBP11.24□□□□□ -0.61
CDH23-213ENST00000619887 FAM84BQ96KN1 310 aaPredicted RBP11.24□□□□□ -0.61
CDH23-213ENST00000619887 CCDC94Q9BW85 323 aaPredicted RBP11.24□□□□□ -0.61
CDH23-213ENST00000619887 CNTNAP4Q9C0A0 1308 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 INCENPQ9NQS7 918 aa11.24□□□□□ -0.61
CDH23-213ENST00000619887 ERLIN1O75477 346 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 KIF20AO95235 890 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 TRIM14Q14142 442 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 SYT10Q6XYQ8 523 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 TMTC3Q6ZXV5 915 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 TGFBRAP1Q8WUH2 860 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 CSRNP2Q9H175 543 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 ATRNO75882 1429 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 TCRBV5S4A2TA0A5A2 114 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 ORC4O43929 436 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 GRAPQ13588 217 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 TBC1D9BQ66K14 1250 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 ENAHQ8N8S7 591 aaPredicted RBP11.23□□□□□ -0.61
CDH23-213ENST00000619887 GRAPLQ8TC17 118 aaPredicted RBP11.23□□□□□ -0.61
CDH23-213ENST00000619887 GSDMAQ96QA5 445 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 FANCLQ9NW38 375 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 SAP30BPQ9UHR5 308 aaKnown RBP11.23□□□□□ -0.61
CDH23-213ENST00000619887 A0A087WWV3 80 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 BICDL2A1A5D9 508 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 MTIF2P46199 727 aaKnown RBP11.23□□□□□ -0.61
CDH23-213ENST00000619887 KIF4BQ2VIQ3 1234 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 LONRF3Q496Y0 759 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 FCHSD1Q86WN1 690 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 DHX40Q8IX18 779 aaKnown RBP11.23□□□□□ -0.61
CDH23-213ENST00000619887 SLC4A9Q96Q91 983 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 OSBPL5Q9H0X9 879 aaPredicted RBP11.23□□□□□ -0.61
CDH23-213ENST00000619887 SRP68Q9UHB9 627 aaKnown RBP11.23□□□□□ -0.61
CDH23-213ENST00000619887 ANAPC4Q9UJX5 808 aa11.23□□□□□ -0.61
CDH23-213ENST00000619887 KCNQ2O43526 872 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 SLFN14P0C7P3 912 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 KIAA1328Q86T90 577 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 DGKHQ86XP1 1220 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 MAPKAPK5Q8IW41 473 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 EYA3Q99504 573 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 PCDHB6Q9Y5E3 794 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 TCHHQ07283 1943 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 NONOQ15233 471 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDH23-213ENST00000619887 CAGE1Q8TC20 777 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 ENOX1Q8TC92 643 aaKnown RBP11.22□□□□□ -0.61
CDH23-213ENST00000619887 DEF6Q9H4E7 631 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms