RNA–Protein interactions for RNA: ENST00000618072.4

CDK2AP1-207, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 3 BASIC

Gene CDK2AP1, Length 1,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-207ENST00000618072 BDP1A6H8Y1 2624 aa21.4■■□□□ 1.02
CDK2AP1-207ENST00000618072 MAPK4P31152 587 aa21.39■■□□□ 1.01
CDK2AP1-207ENST00000618072 SMAD3P84022 425 aaKnown RBP21.39■■□□□ 1.01
CDK2AP1-207ENST00000618072 MAP3K12Q12852 859 aa21.39■■□□□ 1.01
CDK2AP1-207ENST00000618072 ATF7IPQ6VMQ6 1270 aa21.39■■□□□ 1.01
CDK2AP1-207ENST00000618072 SURF6O75683 361 aaKnown RBP21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 GH2P01242 217 aa21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 CYP7A1P22680 504 aa21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 ERVK-9P63128 1117 aa21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 ERVK-24P63145 666 aa21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 SHHQ15465 462 aa21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 WDR78Q5VTH9 848 aa21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 POTEEQ6S8J3 1075 aa21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 GPR142Q7Z601 462 aa21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 MIGA1Q8NAN2 632 aa21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 SOCS4Q8WXH5 440 aa21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 C1orf115Q9H7X2 142 aa21.38■■□□□ 1.01
CDK2AP1-207ENST00000618072 HLA-DOAP06340 250 aa21.37■■□□□ 1.01
CDK2AP1-207ENST00000618072 XRCC5P13010 732 aaKnown RBP21.37■■□□□ 1.01
CDK2AP1-207ENST00000618072 LHX8Q68G74 356 aa21.37■■□□□ 1.01
CDK2AP1-207ENST00000618072 PLEKHH3Q7Z736 793 aa21.37■■□□□ 1.01
CDK2AP1-207ENST00000618072 TMEM57Q8N5G2 664 aa21.37■■□□□ 1.01
CDK2AP1-207ENST00000618072 USP38Q8NB14 1042 aa21.37■■□□□ 1.01
CDK2AP1-207ENST00000618072 IDH1O75874 414 aaKnown RBP21.36■■□□□ 1.01
CDK2AP1-207ENST00000618072 RGS2P41220 211 aa21.36■■□□□ 1.01
CDK2AP1-207ENST00000618072 C9orf50Q5SZB4 431 aa21.36■■□□□ 1.01
CDK2AP1-207ENST00000618072 USP17L2Q6R6M4 530 aa21.36■■□□□ 1.01
CDK2AP1-207ENST00000618072 METTL16Q86W50 562 aaKnown RBP21.36■■□□□ 1.01
CDK2AP1-207ENST00000618072 USP6NLQ92738 828 aa21.36■■□□□ 1.01
CDK2AP1-207ENST00000618072 FEZ1Q99689 392 aa21.36■■□□□ 1.01
CDK2AP1-207ENST00000618072 CCDC8Q9H0W5 538 aaPredicted RBP21.36■■□□□ 1.01
CDK2AP1-207ENST00000618072 TLR7Q9NYK1 1049 aaKnown RBP21.36■■□□□ 1.01
CDK2AP1-207ENST00000618072 USP5P45974 858 aa21.35■■□□□ 1.01
CDK2AP1-207ENST00000618072 POLA2Q14181 598 aa21.35■■□□□ 1.01
CDK2AP1-207ENST00000618072 RAB3GAP1Q15042 981 aa21.35■■□□□ 1.01
CDK2AP1-207ENST00000618072 MORN1Q5T089 497 aa21.35■■□□□ 1.01
CDK2AP1-207ENST00000618072 SENP6Q9GZR1 1112 aaPredicted RBP21.35■■□□□ 1.01
CDK2AP1-207ENST00000618072 GPR108Q9NPR9 543 aa21.35■■□□□ 1.01
CDK2AP1-207ENST00000618072 ATAD5Q96QE3 1844 aa21.34■■□□□ 1.01
CDK2AP1-207ENST00000618072 TRMT44Q8IYL2 757 aaKnown RBP21.34■■□□□ 1.01
CDK2AP1-207ENST00000618072 CNGA1P29973 690 aa21.33■■□□□ 1.01
CDK2AP1-207ENST00000618072 ATP8B2P98198 1209 aa21.33■■□□□ 1.01
CDK2AP1-207ENST00000618072 EDC3Q96F86 508 aaKnown RBP21.33■■□□□ 1.01
CDK2AP1-207ENST00000618072 GINM1Q9NU53 330 aa21.33■■□□□ 1.01
CDK2AP1-207ENST00000618072 DBNLQ9UJU6 430 aaKnown RBP21.33■■□□□ 1.01
CDK2AP1-207ENST00000618072 RLFQ13129 1914 aa21.33■■□□□ 1
CDK2AP1-207ENST00000618072 USP17L15C9J2P7 530 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 USP17L13C9JLJ4 530 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 USP17L11C9JVI0 530 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 USP17L18D6R9N7 530 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 USP17L22D6RA61 530 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 USP17L17D6RBQ6 530 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 USP17L19D6RCP7 530 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 USP17L20D6RJB6 530 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 CNMDO75829 334 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 ATN1P54259 1190 aaPredicted RBP21.32■■□□□ 1
CDK2AP1-207ENST00000618072 USP17L24Q0WX57 530 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 MAP2K5Q13163 448 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 MAGEB6Q8N7X4 407 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 ACER1Q8TDN7 264 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 APBA2Q99767 749 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 FLRT1Q9NZU1 646 aa21.32■■□□□ 1
CDK2AP1-207ENST00000618072 SSH3Q8TE77 659 aa21.31■■□□□ 1
CDK2AP1-207ENST00000618072 SIPA1L1O43166 1804 aa21.3■■□□□ 1
CDK2AP1-207ENST00000618072 RTP1P59025 263 aa21.3■■□□□ 1
CDK2AP1-207ENST00000618072 CERKLQ49MI3 558 aaPredicted RBP21.3■■□□□ 1
CDK2AP1-207ENST00000618072 MFSD14CQ5VZR4 134 aa21.3■■□□□ 1
CDK2AP1-207ENST00000618072 ZKSCAN2Q63HK3 967 aa21.3■■□□□ 1
CDK2AP1-207ENST00000618072 TATDN1Q6P1N9 297 aa21.3■■□□□ 1
CDK2AP1-207ENST00000618072 GTF3C2Q8WUA4 911 aaPredicted RBP21.3■■□□□ 1
CDK2AP1-207ENST00000618072 EAF2Q96CJ1 260 aaPredicted RBP21.3■■□□□ 1
CDK2AP1-207ENST00000618072 ZNF512BQ96KM6 892 aaPredicted RBP21.3■■□□□ 1
CDK2AP1-207ENST00000618072 ANTXR1Q9H6X2 564 aa21.3■■□□□ 1
CDK2AP1-207ENST00000618072 RABGAP1Q9Y3P9 1069 aa21.3■■□□□ 1
CDK2AP1-207ENST00000618072 GLRX3O76003 335 aaKnown RBP21.29■■□□□ 1
CDK2AP1-207ENST00000618072 CCNA1P78396 465 aa21.29■■□□□ 1
CDK2AP1-207ENST00000618072 ATP2B2Q01814 1243 aa21.29■■□□□ 1
CDK2AP1-207ENST00000618072 ABCB5Q2M3G0 1257 aa21.29■■□□□ 1
CDK2AP1-207ENST00000618072 CATSPERGQ6ZRH7 1159 aa21.29■■□□□ 1
CDK2AP1-207ENST00000618072 ADAMTS19Q8TE59 1207 aa21.29■■□□□ 1
CDK2AP1-207ENST00000618072 ATXN2LQ8WWM7 1075 aaKnown RBP21.29■■□□□ 1
CDK2AP1-207ENST00000618072 BTBD7Q9P203 1132 aa21.29■■□□□ 1
CDK2AP1-207ENST00000618072 SERPINB13Q9UIV8 391 aa21.29■■□□□ 1
CDK2AP1-207ENST00000618072 VCAM1P19320 739 aa21.28■■□□□ 1
CDK2AP1-207ENST00000618072 PTPREP23469 700 aa21.28■■□□□ 1
CDK2AP1-207ENST00000618072 CYP2C19P33261 490 aa21.28■■□□□ 1
CDK2AP1-207ENST00000618072 BCL11AQ9H165 835 aa21.28■■□□□ 1
CDK2AP1-207ENST00000618072 SYNGAP1Q96PV0 1343 aa21.28■■□□□ 1
CDK2AP1-207ENST00000618072 PIEZO1Q92508 2521 aa21.27■■□□□ 1
CDK2AP1-207ENST00000618072 MYO9BQ13459 2157 aa21.27■■□□□ 1
CDK2AP1-207ENST00000618072 SLC15A5A6NIM6 579 aa21.27■■□□□ 1
CDK2AP1-207ENST00000618072 MYCNP04198 464 aaPredicted RBP21.27■■□□□ 1
CDK2AP1-207ENST00000618072 PLCD1P51178 756 aa21.27■■□□□ 1
CDK2AP1-207ENST00000618072 GRIN2CQ14957 1233 aa21.27■■□□□ 1
CDK2AP1-207ENST00000618072 TTC6Q86TZ1 520 aa21.27■■□□□ 1
CDK2AP1-207ENST00000618072 NPLOC4Q8TAT6 608 aa21.27■■□□□ 1
CDK2AP1-207ENST00000618072 BADQ92934 168 aa21.27■■□□□ 1
CDK2AP1-207ENST00000618072 C12orf42Q96LP6 360 aa21.27■■□□□ 1
CDK2AP1-207ENST00000618072 UHRF1Q96T88 793 aaPredicted RBP21.27■■□□□ 1
CDK2AP1-207ENST00000618072 RPAP3Q9H6T3 665 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms