RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 MRVI1Q9Y6F6 885 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 CNTNAP5Q8WYK1 1306 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 CDK8P49336 464 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 SCNN1DP51172 638 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 NR5A1Q13285 461 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 UVSSAQ2YD98 709 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 C16orf86Q6ZW13 317 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 DGKHQ86XP1 1220 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 OXER1Q8TDS5 423 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 PDGFDQ9GZP0 370 aaPredicted RBP20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 FOXP1Q9H334 677 aaPredicted RBP20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 KCNQ5Q9NR82 932 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 FOCADQ5VW36 1801 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 KINO60870 393 aaKnown RBP20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 NT5C2P49902 561 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 PTPAQ15257 358 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 AXDND1Q5T1B0 1012 aaPredicted RBP20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 ADAMTSL1Q8N6G6 1762 aa20.03■□□□□ 0.8
PCDHGC3-205ENST00000617641 SNED1Q8TER0 1413 aa20.02■□□□□ 0.8
PCDHGC3-205ENST00000617641 WDHD1O75717 1129 aaPredicted RBP20.02■□□□□ 0.8
PCDHGC3-205ENST00000617641 NDUFA8P51970 172 aa20.02■□□□□ 0.8
PCDHGC3-205ENST00000617641 PICALMQ13492 652 aa20.02■□□□□ 0.8
PCDHGC3-205ENST00000617641 FMR1NBQ8N0W7 255 aaPredicted RBP20.02■□□□□ 0.8
PCDHGC3-205ENST00000617641 PNMA1Q8ND90 353 aa20.02■□□□□ 0.8
PCDHGC3-205ENST00000617641 ANKS1AQ92625 1134 aa20.02■□□□□ 0.79
PCDHGC3-205ENST00000617641 TOB1P50616 345 aaPredicted RBP20.01■□□□□ 0.79
PCDHGC3-205ENST00000617641 ZNF287Q9HBT7 754 aa20.01■□□□□ 0.79
PCDHGC3-205ENST00000617641 TCP11L1Q9NUJ3 509 aa20.01■□□□□ 0.79
PCDHGC3-205ENST00000617641 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.01■□□□□ 0.79
PCDHGC3-205ENST00000617641 XBP1P17861 261 aa20.01■□□□□ 0.79
PCDHGC3-205ENST00000617641 CNKSR1Q969H4 720 aa20.01■□□□□ 0.79
PCDHGC3-205ENST00000617641 KIF5BP33176 963 aa20■□□□□ 0.79
PCDHGC3-205ENST00000617641 CCDC178Q5BJE1 867 aa20■□□□□ 0.79
PCDHGC3-205ENST00000617641 SASS6Q6UVJ0 657 aa20■□□□□ 0.79
PCDHGC3-205ENST00000617641 PODNQ7Z5L7 613 aa20■□□□□ 0.79
PCDHGC3-205ENST00000617641 PIBF1Q8WXW3 757 aa20■□□□□ 0.79
PCDHGC3-205ENST00000617641 PHF20Q9BVI0 1012 aa20■□□□□ 0.79
PCDHGC3-205ENST00000617641 DDX4Q9NQI0 724 aaKnown RBP20■□□□□ 0.79
PCDHGC3-205ENST00000617641 USP25Q9UHP3 1055 aa20■□□□□ 0.79
PCDHGC3-205ENST00000617641 CTAGE5O15320 804 aa19.99■□□□□ 0.79
PCDHGC3-205ENST00000617641 PPP6R2O75170 966 aa19.99■□□□□ 0.79
PCDHGC3-205ENST00000617641 ANO6Q4KMQ2 910 aa19.99■□□□□ 0.79
PCDHGC3-205ENST00000617641 DEFB132Q7Z7B7 95 aa19.99■□□□□ 0.79
PCDHGC3-205ENST00000617641 FAM43AQ8N2R8 423 aa19.99■□□□□ 0.79
PCDHGC3-205ENST00000617641 STX8Q9UNK0 236 aa19.99■□□□□ 0.79
PCDHGC3-205ENST00000617641 BAZ2BQ9UIF8 2168 aaKnown RBP19.99■□□□□ 0.79
PCDHGC3-205ENST00000617641 STAG2Q8N3U4 1231 aa19.99■□□□□ 0.79
PCDHGC3-205ENST00000617641 USP40Q9NVE5 1235 aa19.99■□□□□ 0.79
PCDHGC3-205ENST00000617641 MTMR7Q9Y216 660 aa19.99■□□□□ 0.79
PCDHGC3-205ENST00000617641 ECE2O60344 883 aa19.98■□□□□ 0.79
PCDHGC3-205ENST00000617641 CMA1P23946 247 aa19.98■□□□□ 0.79
PCDHGC3-205ENST00000617641 TMEM47Q9BQJ4 181 aa19.98■□□□□ 0.79
PCDHGC3-205ENST00000617641 RRAGDQ9NQL2 400 aaPredicted RBP19.98■□□□□ 0.79
PCDHGC3-205ENST00000617641 JMYQ8N9B5 988 aa19.98■□□□□ 0.79
PCDHGC3-205ENST00000617641 FAM200AQ8TCP9 573 aa19.98■□□□□ 0.79
PCDHGC3-205ENST00000617641 C7orf43Q8WVR3 580 aa19.98■□□□□ 0.79
PCDHGC3-205ENST00000617641 TEKT1Q969V4 418 aa19.98■□□□□ 0.79
PCDHGC3-205ENST00000617641 SCN9AQ15858 1988 aa19.98■□□□□ 0.79
PCDHGC3-205ENST00000617641 FAM205CA6NFA0 338 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 VEGFAP15692 232 aaPredicted RBP19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 PFKFB1P16118 471 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 KRT2P35908 639 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 GRM4Q14833 912 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 RILPL1Q5EBL4 403 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 CDC42EP5Q6NZY7 148 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 NEDD1Q8NHV4 660 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 CLIC6Q96NY7 704 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 CABP5Q9NP86 173 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 GOLGB1Q14789 3259 aaKnown RBP19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 SCG2P13521 617 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 AOC3Q16853 763 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 APOBEC3HQ6NTF7 200 aaKnown RBP19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 HHIPL2Q6UWX4 724 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 ERCC4Q92889 916 aaPredicted RBP19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 MAD2L2Q9UI95 211 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 PCDHB6Q9Y5E3 794 aa19.97■□□□□ 0.79
PCDHGC3-205ENST00000617641 ATP2B1P20020 1258 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 CRKP46108 304 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 SHC4Q6S5L8 630 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 KIAA0825Q8IV33 1275 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 DNAJC25Q9H1X3 360 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 BAG6P46379 1132 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 SF3B2Q13435 895 aaKnown RBP19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 NPY5RQ15761 445 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 EARS2Q5JPH6 523 aaKnown RBP19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 STRIP1Q5VSL9 837 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 RASGRP2Q7LDG7 609 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 LUZP1Q86V48 1076 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 SDF4Q9BRK5 362 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 CBX8Q9HC52 389 aa19.96■□□□□ 0.79
PCDHGC3-205ENST00000617641 ZNF202O95125 648 aa19.95■□□□□ 0.78
PCDHGC3-205ENST00000617641 PFKFB3Q16875 520 aaPredicted RBP19.95■□□□□ 0.78
PCDHGC3-205ENST00000617641 DACT2Q5SW24 774 aa19.95■□□□□ 0.78
PCDHGC3-205ENST00000617641 PCDHAC2Q9Y5I4 1007 aa19.95■□□□□ 0.78
PCDHGC3-205ENST00000617641 GABPAQ06546 454 aa19.94■□□□□ 0.78
PCDHGC3-205ENST00000617641 CEP95Q96GE4 821 aa19.94■□□□□ 0.78
PCDHGC3-205ENST00000617641 ZNF646O15015 1829 aaPredicted RBP19.94■□□□□ 0.78
PCDHGC3-205ENST00000617641 A0A087WWV3 80 aa19.94■□□□□ 0.78
PCDHGC3-205ENST00000617641 CUTAO60888 179 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms