RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 SF3B3Q15393 1217 aaKnown RBP16.52■□□□□ 0.24
SHROOM1-208ENST00000617339 CRACR2BQ8N4Y2 399 aaPredicted RBP16.52■□□□□ 0.24
SHROOM1-208ENST00000617339 CCDC34Q96HJ3 373 aa16.52■□□□□ 0.24
SHROOM1-208ENST00000617339 DCP1AQ9NPI6 582 aaPredicted RBP16.52■□□□□ 0.24
SHROOM1-208ENST00000617339 KIAA1468Q9P260 1216 aa16.52■□□□□ 0.24
SHROOM1-208ENST00000617339 MCM7P33993 719 aa16.52■□□□□ 0.23
SHROOM1-208ENST00000617339 SCNN1DP51172 638 aa16.52■□□□□ 0.23
SHROOM1-208ENST00000617339 NLRP5P59047 1200 aa16.52■□□□□ 0.23
SHROOM1-208ENST00000617339 BRAPQ7Z569 592 aa16.52■□□□□ 0.23
SHROOM1-208ENST00000617339 CLEC10AQ8IUN9 316 aa16.52■□□□□ 0.23
SHROOM1-208ENST00000617339 NOSTRINQ8IVI9 506 aa16.52■□□□□ 0.23
SHROOM1-208ENST00000617339 CTCFLQ8NI51 663 aaPredicted RBP16.52■□□□□ 0.23
SHROOM1-208ENST00000617339 MAPK8IP1Q9UQF2 711 aa16.52■□□□□ 0.23
SHROOM1-208ENST00000617339 MARCH6O60337 910 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 SERPINC1P01008 464 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 GYS2P54840 703 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 CCZ1BP86790 482 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 CCZ1P86791 482 aaPredicted RBP16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 NYAP1Q6ZVC0 841 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 TMC6Q7Z403 805 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 ENGASEQ8NFI3 743 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 ZNF512BQ96KM6 892 aaPredicted RBP16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 RAD51AP2Q09MP3 1159 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 SLC39A14Q15043 492 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 PIK3AP1Q6ZUJ8 805 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 EPSTI1Q96J88 318 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 ZC3H12CQ9C0D7 883 aaKnown RBP16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 KCNH3Q9ULD8 1083 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 ITGB4P16144 1822 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 VWA3AA6NCI4 1184 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 PNMA6AP0CW24 399 aaPredicted RBP16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 GTF2IP78347 998 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 NBPF11Q86T75 865 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 C10orf67Q8IYJ2 551 aa16.51■□□□□ 0.23
SHROOM1-208ENST00000617339 ADAMTS3O15072 1205 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 SERPINB2P05120 415 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 TJP1Q07157 1748 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 KRBA2Q6ZNG9 492 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 SMYD4Q8IYR2 804 aaPredicted RBP16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 CYP2C19P33261 490 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 SERTAD1Q9UHV2 236 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 DNAI1Q9UI46 699 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 WNT7AO00755 349 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 PLCD1P51178 756 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 AXDND1Q5T1B0 1012 aaPredicted RBP16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 TMCO3Q6UWJ1 677 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 ZNF444Q8N0Y2 327 aaPredicted RBP16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 STAG2Q8N3U4 1231 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 MNS1Q8NEH6 495 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 STAG1Q8WVM7 1258 aa16.5■□□□□ 0.23
SHROOM1-208ENST00000617339 TSPY3P0CV98 308 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 TSPY8P0CW00 308 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 CFAP100Q494V2 611 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 UBXN4Q92575 508 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 PCDHA5Q9Y5H7 936 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 FHOD1Q9Y613 1164 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 PES1O00541 588 aaKnown RBP16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 LIFRP42702 1097 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 PLA2G4AP47712 749 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 GPSM2P81274 684 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 IQCB1Q15051 598 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 TEX35Q5T0J7 233 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 JMYQ8N9B5 988 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 NAT10Q9H0A0 1025 aaKnown RBP16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 POLR3EQ9NVU0 708 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 FEZ2Q9UHY8 353 aaPredicted RBP16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 CCDC196A0A1B0GTZ2 297 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 URI1O94763 535 aaPredicted RBP16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 FMNL1O95466 1100 aaPredicted RBP16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 TOB1P50616 345 aaPredicted RBP16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 MFSD14BQ5SR56 506 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 XPO4Q9C0E2 1151 aaKnown RBP16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 PARP3Q9Y6F1 533 aa16.49■□□□□ 0.23
SHROOM1-208ENST00000617339 IFNAR1P17181 557 aa16.48■□□□□ 0.23
SHROOM1-208ENST00000617339 CACNB3P54284 484 aa16.48■□□□□ 0.23
SHROOM1-208ENST00000617339 EVCP57679 992 aa16.48■□□□□ 0.23
SHROOM1-208ENST00000617339 PRR5LQ6MZQ0 368 aa16.48■□□□□ 0.23
SHROOM1-208ENST00000617339 HEATR3Q7Z4Q2 680 aa16.48■□□□□ 0.23
SHROOM1-208ENST00000617339 CPLX3Q8WVH0 158 aa16.48■□□□□ 0.23
SHROOM1-208ENST00000617339 KAT14Q9H8E8 782 aa16.48■□□□□ 0.23
SHROOM1-208ENST00000617339 COL4A1P02462 1669 aa16.48■□□□□ 0.23
SHROOM1-208ENST00000617339 MMP1P03956 469 aa16.48■□□□□ 0.23
SHROOM1-208ENST00000617339 FBXO33Q7Z6M2 555 aa16.48■□□□□ 0.23
SHROOM1-208ENST00000617339 BLZF1Q9H2G9 400 aa16.48■□□□□ 0.23
SHROOM1-208ENST00000617339 DEXIO95424 95 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 SGMS1Q86VZ5 419 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 NUP98P52948 1817 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 YEATS4O95619 227 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 PDE4BQ07343 736 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 DHX40Q8IX18 779 aaKnown RBP16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 ANKRD2Q9GZV1 360 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 UBA5Q9GZZ9 404 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 CSRNP2Q9H175 543 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 RSPH14Q9UHP6 348 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 FAM196BA6NMK8 535 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 TRIM66O15016 1216 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 CTAGE5O15320 804 aa16.47■□□□□ 0.23
SHROOM1-208ENST00000617339 KRI1Q8N9T8 703 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 263.2 ms