RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SIAH1Q8IUQ4 282 aa18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 WNK4Q96J92 1243 aa18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 HHIPL1Q96JK4 782 aa18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 MTMR4Q9NYA4 1195 aa18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 RASSF10A6NK89 507 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 EEF2P13639 858 aaKnown RBP18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 HSPA6P17066 643 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 MCM5P33992 734 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 ANTXR2P58335 489 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 SPP2Q13103 211 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 PPIL2Q13356 520 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 SPRYD7Q5W111 196 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 RASAL3Q86YV0 1011 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 ZNF280CQ8ND82 737 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 ACER1Q8TDN7 264 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 ZSCAN10Q96SZ4 725 aaPredicted RBP18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 UBAC1Q9BSL1 405 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 WDR18Q9BV38 432 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 AS3MTQ9HBK9 375 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 CLIP2Q9UDT6 1046 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 AFG3L2Q9Y4W6 797 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 PLIN4Q96Q06 1357 aa18.4■□□□□ 0.54
PCDHGC3-204ENST00000617222 LAMA4Q16363 1823 aa18.39■□□□□ 0.54
PCDHGC3-204ENST00000617222 TRIM75PA6NK02 468 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 IRF6O14896 467 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 PRC1O43663 620 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 CPA1P15085 419 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 CASTP20810 708 aaKnown RBP18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 RBM25P49756 843 aaKnown RBP18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 GRM1Q13255 1194 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 CCDC178Q5BJE1 867 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 CYP4F22Q6NT55 531 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 BLOC1S2Q6QNY1 142 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 DHX32Q7L7V1 743 aaKnown RBP18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 CCDC102AQ96A19 550 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 TBC1D2Q9BYX2 928 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 NYAP2Q9P242 653 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 STX8Q9UNK0 236 aa18.39■□□□□ 0.53
PCDHGC3-204ENST00000617222 A0A1W2PRG0 241 aa18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 IFIT3O14879 490 aaKnown RBP18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 TTLL1O95922 423 aa18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 HMGB1P09429 215 aaKnown RBP18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 ECE1P42892 770 aa18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 EXOSC10Q01780 885 aaKnown RBP18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 PPP4R3BQ5MIZ7 849 aa18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 TCEANC2Q96MN5 208 aa18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 TM6SF1Q9BZW5 370 aa18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 ARHGEF10LQ9HCE6 1279 aa18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 ZSWIM6Q9HCJ5 1215 aa18.38■□□□□ 0.53
PCDHGC3-204ENST00000617222 FAM155AB1AL88 458 aaPredicted RBP18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 USP17L10C9JJH3 530 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 CXCL11O14625 94 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 SLC10A3P09131 477 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 RCSD1Q6JBY9 416 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 IGDCC4Q8TDY8 1250 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 IL17RAQ96F46 866 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 TTC14Q96N46 770 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 TBC1D32Q96NH3 1257 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 FEZ1Q99689 392 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 KCNH4Q9UQ05 1017 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 CYP46A1Q9Y6A2 500 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 TNKSO95271 1327 aa18.37■□□□□ 0.53
PCDHGC3-204ENST00000617222 ERICH2A1L162 156 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 ZBTB48P10074 688 aaPredicted RBP18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 RPS6KB1P23443 525 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 NOVP48745 357 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 BACE1P56817 501 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 TMEM67Q5HYA8 995 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 RUFY3Q7L099 469 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 DGKHQ86XP1 1220 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 ENAHQ8N8S7 591 aaPredicted RBP18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 ANKS1AQ92625 1134 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 MKL1Q969V6 931 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 TMEM87BQ96K49 555 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 CAPNS2Q96L46 248 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 GPHNQ9NQX3 736 aaPredicted RBP18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 TMX2Q9Y320 296 aa18.36■□□□□ 0.53
PCDHGC3-204ENST00000617222 OTOFQ9HC10 1997 aa18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 TOP1P11387 765 aaKnown RBP18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 SNAPC2Q13487 334 aa18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 MTMR2Q13614 643 aa18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 SEC23AQ15436 765 aa18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 ZYXQ15942 572 aaKnown RBP18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 LRRC47Q8N1G4 583 aaKnown RBP18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 KIF2CQ99661 725 aa18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 TMEM47Q9BQJ4 181 aa18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 MTA3Q9BTC8 594 aa18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 SH2D4AQ9H788 454 aa18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 SENP2Q9HC62 589 aa18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 DOCK1Q14185 1865 aa18.35■□□□□ 0.53
PCDHGC3-204ENST00000617222 WDR19Q8NEZ3 1342 aa18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 C19orf81C9J6K1 198 aa18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 SH2B2O14492 632 aaPredicted RBP18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 RAD21O60216 631 aa18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 GTF2A2P52657 109 aa18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 USP14P54578 494 aa18.34■□□□□ 0.53
PCDHGC3-204ENST00000617222 HMGCS2P54868 508 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms