RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
RABGAP1-213ENST00000616002 CREBRFQ8IUR6 639 aa12.88□□□□□ -0.35
RABGAP1-213ENST00000616002 CHMP4CQ96CF2 233 aa12.88□□□□□ -0.35
RABGAP1-213ENST00000616002 MRFAP1L1Q96HT8 127 aa12.88□□□□□ -0.35
RABGAP1-213ENST00000616002 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
RABGAP1-213ENST00000616002 ZFYVE28Q9HCC9 887 aa12.88□□□□□ -0.35
RABGAP1-213ENST00000616002 OTOFQ9HC10 1997 aa12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 KIF2AO00139 706 aaPredicted RBP12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 TUBB4AP04350 444 aa12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 TNNI2P48788 182 aa12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 GTF2A2P52657 109 aa12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 SLC9C1Q4G0N8 1177 aa12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 CBX8Q9HC52 389 aa12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 TPCN1Q9ULQ1 816 aa12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 RBM8AQ9Y5S9 174 aaKnown RBP12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 CSADQ9Y600 493 aa12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 CENPFP49454 3210 aa12.87□□□□□ -0.35
RABGAP1-213ENST00000616002 CCL15-CCL14A0A0B4J2E2 113 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 VPS37CA5D8V6 355 aaPredicted RBP12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 GOLGA6L4A6NEF3 574 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 TCP10L2B9ZVM9 353 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 GRM8O00222 908 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 SLC27A2O14975 620 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 NBPF7P0C2Y1 421 aaPredicted RBP12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 HIBADHP31937 336 aaKnown RBP12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 GYG1P46976 350 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 MAP3K9P80192 1104 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 CAP1Q01518 475 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 VGLL4Q14135 290 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 CCL15Q16663 113 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 ADCK5Q3MIX3 580 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 EPHA10Q5JZY3 1008 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 BLOC1S2Q6QNY1 142 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 LEO1Q8WVC0 666 aaPredicted RBP12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 BRI3BPQ8WY22 251 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 ZNF333Q96JL9 665 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 LLPHQ9BRT6 129 aaKnown RBP12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 C9orf78Q9NZ63 289 aaPredicted RBP12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 CFAP45Q9UL16 551 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 UBE4AQ14139 1066 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 ATP2B3Q16720 1220 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 SLC4A8Q2Y0W8 1093 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 ZSCAN25Q6NSZ9 544 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 SPATA32Q96LK8 384 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 TEPSINQ96N21 525 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 TMEM39BQ9GZU3 492 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 PTCH2Q9Y6C5 1203 aa12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 MORC2Q9Y6X9 1032 aaPredicted RBP12.86□□□□□ -0.35
RABGAP1-213ENST00000616002 MAP4K4O95819 1239 aaPredicted RBP12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 LIG1P18858 919 aa12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 PTGS1P23219 599 aa12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 CRKP46108 304 aa12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 OS9Q13438 667 aaPredicted RBP12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 SLFNL1Q499Z3 407 aa12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 ANO6Q4KMQ2 910 aa12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 CCDC186Q7Z3E2 898 aa12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 VPS37DQ86XT2 251 aa12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 FAM177A1Q8N128 213 aaPredicted RBP12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 C17orf53Q8N3J3 647 aaPredicted RBP12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 FAM84BQ96KN1 310 aaPredicted RBP12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 DACT1Q9NYF0 836 aa12.85□□□□□ -0.35
RABGAP1-213ENST00000616002 KCNJ6P48051 423 aa12.84□□□□□ -0.35
RABGAP1-213ENST00000616002 ZNF165P49910 485 aa12.84□□□□□ -0.35
RABGAP1-213ENST00000616002 NCBP1Q09161 790 aaKnown RBP12.84□□□□□ -0.35
RABGAP1-213ENST00000616002 KIF22Q14807 665 aa12.84□□□□□ -0.35
RABGAP1-213ENST00000616002 CTNNA3Q9UI47 895 aa12.84□□□□□ -0.35
RABGAP1-213ENST00000616002 DDX41Q9UJV9 622 aaKnown RBP12.84□□□□□ -0.35
RABGAP1-213ENST00000616002 BRCA2P51587 3418 aa12.84□□□□□ -0.35
RABGAP1-213ENST00000616002 MYCP01106 439 aaPredicted RBP12.83□□□□□ -0.36
RABGAP1-213ENST00000616002 CETPP11597 493 aa12.83□□□□□ -0.36
RABGAP1-213ENST00000616002 TNNT1P13805 278 aa12.83□□□□□ -0.36
RABGAP1-213ENST00000616002 CBX1P83916 185 aa12.83□□□□□ -0.36
RABGAP1-213ENST00000616002 NAA16Q6N069 864 aaPredicted RBP12.83□□□□□ -0.36
RABGAP1-213ENST00000616002 SPC24Q8NBT2 197 aa12.83□□□□□ -0.36
RABGAP1-213ENST00000616002 CCDC112Q8NEF3 446 aa12.83□□□□□ -0.36
RABGAP1-213ENST00000616002 TRIM5Q9C035 493 aa12.83□□□□□ -0.36
RABGAP1-213ENST00000616002 TMOD2Q9NZR1 351 aa12.83□□□□□ -0.36
RABGAP1-213ENST00000616002 ARAP2Q8WZ64 1704 aa12.83□□□□□ -0.36
RABGAP1-213ENST00000616002 SPDYE5A6NIY4 337 aa12.82□□□□□ -0.36
RABGAP1-213ENST00000616002 FXR1P51114 621 aaKnown RBP eCLIP12.82□□□□□ -0.36
RABGAP1-213ENST00000616002 TOB2Q14106 344 aaPredicted RBP12.82□□□□□ -0.36
RABGAP1-213ENST00000616002 LUZP1Q86V48 1076 aa12.82□□□□□ -0.36
RABGAP1-213ENST00000616002 TBC1D22AQ8WUA7 517 aa12.82□□□□□ -0.36
RABGAP1-213ENST00000616002 TEKT1Q969V4 418 aa12.82□□□□□ -0.36
RABGAP1-213ENST00000616002 FAM53CQ9NYF3 392 aa12.82□□□□□ -0.36
RABGAP1-213ENST00000616002 RCOR1Q9UKL0 485 aa12.82□□□□□ -0.36
RABGAP1-213ENST00000616002 IQSEC3Q9UPP2 1182 aaPredicted RBP12.82□□□□□ -0.36
RABGAP1-213ENST00000616002 MROH5Q6ZUA9 1318 aa12.82□□□□□ -0.36
RABGAP1-213ENST00000616002 TLR2O60603 784 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 BRD2P25440 801 aaKnown RBP12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 GSDMDP57764 484 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 LACTBP83111 547 aaPredicted RBP12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 HDLBPQ00341 1268 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms