RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 NEDD1Q8NHV4 660 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 CNKSR2Q8WXI2 1034 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 CCDC17Q96LX7 622 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 ZSCAN10Q96SZ4 725 aaPredicted RBP10.72□□□□□ -0.69
MMP28-205ENST00000615317 FEZ1Q99689 392 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 SENP2Q9HC62 589 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 ZSWIM6Q9HCJ5 1215 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 PICK1Q9NRD5 415 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 ZSWIM5Q9P217 1185 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 ZNF112Q9UJU3 913 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 STX8Q9UNK0 236 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 CYP46A1Q9Y6A2 500 aa10.72□□□□□ -0.69
MMP28-205ENST00000615317 RBBP6Q7Z6E9 1792 aaKnown RBP10.72□□□□□ -0.69
MMP28-205ENST00000615317 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
MMP28-205ENST00000615317 ERICH2A1L162 156 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 IFIT3O14879 490 aaKnown RBP10.71□□□□□ -0.69
MMP28-205ENST00000615317 HMGB1P09429 215 aaKnown RBP10.71□□□□□ -0.69
MMP28-205ENST00000615317 HUNKP57058 714 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 FKBP1BP68106 108 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 MAP3K9P80192 1104 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 WTAPQ15007 396 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 SART3Q15020 963 aaKnown RBP10.71□□□□□ -0.69
MMP28-205ENST00000615317 ZYXQ15942 572 aaKnown RBP10.71□□□□□ -0.69
MMP28-205ENST00000615317 Q6ZUG5 572 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 DHX32Q7L7V1 743 aaKnown RBP10.71□□□□□ -0.69
MMP28-205ENST00000615317 RAB11FIP4Q86YS3 637 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 C2orf69Q8N8R5 385 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 ENAHQ8N8S7 591 aaPredicted RBP10.71□□□□□ -0.69
MMP28-205ENST00000615317 WDR19Q8NEZ3 1342 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 TM6SF1Q9BZW5 370 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 IL17RBQ9NRM6 502 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 PDRG1Q9NUG6 133 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 ABT1Q9ULW3 272 aaKnown RBP10.71□□□□□ -0.69
MMP28-205ENST00000615317 MTMR7Q9Y216 660 aa10.71□□□□□ -0.69
MMP28-205ENST00000615317 SPDYE5A6NIY4 337 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 RAD21O60216 631 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 EEF2P13639 858 aaKnown RBP10.7□□□□□ -0.7
MMP28-205ENST00000615317 PTPRAP18433 802 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 ECE1P42892 770 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 NT5C2P49902 561 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 NEK4P51957 841 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 AK2P54819 239 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
MMP28-205ENST00000615317 DGKZQ13574 1117 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 MTMR2Q13614 643 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 SEC23AQ15436 765 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 IFIT1BQ5T764 474 aaKnown RBP10.7□□□□□ -0.7
MMP28-205ENST00000615317 RCSD1Q6JBY9 416 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 BRF1Q92994 677 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 CHMP4CQ96CF2 233 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 TMEM87BQ96K49 555 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 TTC14Q96N46 770 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 LY9Q9HBG7 655 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 ARHGEF10LQ9HCE6 1279 aa10.7□□□□□ -0.7
MMP28-205ENST00000615317 RLFQ13129 1914 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 TRIM75PA6NK02 468 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 TMEM88BA6NKF7 163 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 GOLGA8BA8MQT2 603 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 USP17L5A8MUK1 530 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
MMP28-205ENST00000615317 TTLL1O95922 423 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 RXRAP19793 462 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 EXOSC10Q01780 885 aaKnown RBP10.69□□□□□ -0.7
MMP28-205ENST00000615317 TOB2Q14106 344 aaPredicted RBP10.69□□□□□ -0.7
MMP28-205ENST00000615317 LDLRAD1Q5T700 205 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 NFXL1Q6ZNB6 911 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 PAXIP1Q6ZW49 1069 aaPredicted RBP10.69□□□□□ -0.7
MMP28-205ENST00000615317 MICU3Q86XE3 530 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 ACER1Q8TDN7 264 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 OPTNQ96CV9 577 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 LARP6Q9BRS8 491 aaKnown RBP10.69□□□□□ -0.7
MMP28-205ENST00000615317 MYL10Q9BUA6 226 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 KAT14Q9H8E8 782 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 KANSL2Q9H9L4 492 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 AS3MTQ9HBK9 375 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 GINM1Q9NU53 330 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 TCP11L1Q9NUJ3 509 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 MTMR4Q9NYA4 1195 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 NAP1L2Q9ULW6 460 aaPredicted RBP10.69□□□□□ -0.7
MMP28-205ENST00000615317 TLL2Q9Y6L7 1015 aa10.69□□□□□ -0.7
MMP28-205ENST00000615317 KLF18A0A0U1RQI7 1052 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 A0A1W2PRG0 241 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 CCDC69A6NI79 296 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 ST18O60284 1047 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 LARGE1O95461 756 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 GJA5P36382 358 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 APOBRQ0VD83 1088 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 SAPCD2Q86UD0 394 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 ERO1BQ86YB8 467 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 RASAL3Q86YV0 1011 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 ZNF654Q8IZM8 581 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 IGDCC4Q8TDY8 1250 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 WNK4Q96J92 1243 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 TMEM47Q9BQJ4 181 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 CLIP2Q9UDT6 1046 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 ISY1Q9ULR0 285 aaKnown RBP10.68□□□□□ -0.7
MMP28-205ENST00000615317 ZHX2Q9Y6X8 837 aa10.68□□□□□ -0.7
MMP28-205ENST00000615317 TOP1P11387 765 aaKnown RBP10.67□□□□□ -0.7
MMP28-205ENST00000615317 APLP1P51693 650 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms