RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 TTLL1O95922 423 aa17.28■□□□□ 0.36
CD48-203ENST00000613788 GUCY1A2P33402 732 aa17.28■□□□□ 0.36
CD48-203ENST00000613788 TMEM67Q5HYA8 995 aa17.28■□□□□ 0.36
CD48-203ENST00000613788 IGDCC4Q8TDY8 1250 aa17.28■□□□□ 0.36
CD48-203ENST00000613788 CEP95Q96GE4 821 aa17.28■□□□□ 0.36
CD48-203ENST00000613788 TBC1D2Q9BYX2 928 aa17.28■□□□□ 0.36
CD48-203ENST00000613788 STX8Q9UNK0 236 aa17.28■□□□□ 0.36
CD48-203ENST00000613788 TNKSO95271 1327 aa17.28■□□□□ 0.36
CD48-203ENST00000613788 NMT2O60551 498 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 PTPRAP18433 802 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 ICA1Q05084 483 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 COL9A3Q14050 684 aaPredicted RBP17.27■□□□□ 0.36
CD48-203ENST00000613788 WTAPQ15007 396 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 SHROOM1Q2M3G4 852 aaPredicted RBP17.27■□□□□ 0.36
CD48-203ENST00000613788 FBXL16Q8N461 479 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 ANKS1AQ92625 1134 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 SLC10A4Q96EP9 437 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 TCEANC2Q96MN5 208 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 ALDH8A1Q9H2A2 487 aaPredicted RBP17.27■□□□□ 0.36
CD48-203ENST00000613788 AS3MTQ9HBK9 375 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 NYAP2Q9P242 653 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 SNCAIPQ9Y6H5 919 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 PAPPA2Q9BXP8 1791 aa17.27■□□□□ 0.36
CD48-203ENST00000613788 TMEM88BA6NKF7 163 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 ST18O60284 1047 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 LIFRP42702 1097 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 NOVP48745 357 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 ANKRD1Q15327 319 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 IFIT1BQ5T764 474 aaKnown RBP17.26■□□□□ 0.35
CD48-203ENST00000613788 Q6ZUG5 572 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 ENAHQ8N8S7 591 aaPredicted RBP17.26■□□□□ 0.35
CD48-203ENST00000613788 LRRC2Q9BYS8 371 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 ARHGEF10LQ9HCE6 1279 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 CLIP2Q9UDT6 1046 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 MYH8P13535 1937 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 SH2B2O14492 632 aaPredicted RBP17.26■□□□□ 0.35
CD48-203ENST00000613788 EEF2P13639 858 aaKnown RBP17.26■□□□□ 0.35
CD48-203ENST00000613788 HUNKP57058 714 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 ATP2B2Q01814 1243 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 SEC23AQ15436 765 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 ERO1BQ86YB8 467 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 MKL1Q969V6 931 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 ELP3Q9H9T3 547 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 ZHX2Q9Y6X8 837 aa17.26■□□□□ 0.35
CD48-203ENST00000613788 TOP1P11387 765 aaKnown RBP17.25■□□□□ 0.35
CD48-203ENST00000613788 PPATQ06203 517 aa17.25■□□□□ 0.35
CD48-203ENST00000613788 RCSD1Q6JBY9 416 aa17.25■□□□□ 0.35
CD48-203ENST00000613788 NFXL1Q6ZNB6 911 aa17.25■□□□□ 0.35
CD48-203ENST00000613788 SAPCD2Q86UD0 394 aa17.25■□□□□ 0.35
CD48-203ENST00000613788 CLMNQ96JQ2 1002 aa17.25■□□□□ 0.35
CD48-203ENST00000613788 WDR18Q9BV38 432 aa17.25■□□□□ 0.35
CD48-203ENST00000613788 AGXT2Q9BYV1 514 aa17.25■□□□□ 0.35
CD48-203ENST00000613788 KAT14Q9H8E8 782 aa17.25■□□□□ 0.35
CD48-203ENST00000613788 LY9Q9HBG7 655 aa17.25■□□□□ 0.35
CD48-203ENST00000613788 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.25■□□□□ 0.35
CD48-203ENST00000613788 SYNPO2Q9UMS6 1093 aa17.25■□□□□ 0.35
CD48-203ENST00000613788 TRPM7Q96QT4 1865 aa17.24■□□□□ 0.35
CD48-203ENST00000613788 CCDC69A6NI79 296 aa17.24■□□□□ 0.35
CD48-203ENST00000613788 SPDYE5A6NIY4 337 aa17.24■□□□□ 0.35
CD48-203ENST00000613788 CLEC10AQ8IUN9 316 aa17.24■□□□□ 0.35
CD48-203ENST00000613788 SIAH1Q8IUQ4 282 aa17.24■□□□□ 0.35
CD48-203ENST00000613788 ZNF280CQ8ND82 737 aa17.24■□□□□ 0.35
CD48-203ENST00000613788 BRF1Q92994 677 aa17.24■□□□□ 0.35
CD48-203ENST00000613788 TMEM47Q9BQJ4 181 aa17.24■□□□□ 0.35
CD48-203ENST00000613788 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.24■□□□□ 0.35
CD48-203ENST00000613788 TLL2Q9Y6L7 1015 aa17.24■□□□□ 0.35
CD48-203ENST00000613788 AK2P54819 239 aa17.23■□□□□ 0.35
CD48-203ENST00000613788 SYNE3Q6ZMZ3 975 aa17.23■□□□□ 0.35
CD48-203ENST00000613788 CCDC84Q86UT8 332 aaPredicted RBP17.23■□□□□ 0.35
CD48-203ENST00000613788 SGMS1Q86VZ5 419 aa17.23■□□□□ 0.35
CD48-203ENST00000613788 GPHNQ9NQX3 736 aaPredicted RBP17.23■□□□□ 0.35
CD48-203ENST00000613788 ABT1Q9ULW3 272 aaKnown RBP17.23■□□□□ 0.35
CD48-203ENST00000613788 TMX2Q9Y320 296 aa17.23■□□□□ 0.35
CD48-203ENST00000613788 USP17L10C9JJH3 530 aa17.22■□□□□ 0.35
CD48-203ENST00000613788 APLP1P51693 650 aa17.22■□□□□ 0.35
CD48-203ENST00000613788 SPP2Q13103 211 aa17.22■□□□□ 0.35
CD48-203ENST00000613788 TOB2Q14106 344 aaPredicted RBP17.22■□□□□ 0.35
CD48-203ENST00000613788 CATIPQ7Z7H3 387 aa17.22■□□□□ 0.35
CD48-203ENST00000613788 OPTNQ96CV9 577 aa17.22■□□□□ 0.35
CD48-203ENST00000613788 FEZ1Q99689 392 aa17.22■□□□□ 0.35
CD48-203ENST00000613788 AFG3L2Q9Y4W6 797 aa17.22■□□□□ 0.35
CD48-203ENST00000613788 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
CD48-203ENST00000613788 DOCK1Q14185 1865 aa17.22■□□□□ 0.35
CD48-203ENST00000613788 A0A1W2PRG0 241 aa17.21■□□□□ 0.35
CD48-203ENST00000613788 C19orf81C9J6K1 198 aa17.21■□□□□ 0.35
CD48-203ENST00000613788 MCM2P49736 904 aa17.21■□□□□ 0.35
CD48-203ENST00000613788 USP14P54578 494 aa17.21■□□□□ 0.35
CD48-203ENST00000613788 PPIL2Q13356 520 aa17.21■□□□□ 0.35
CD48-203ENST00000613788 PNMA1Q8ND90 353 aa17.21■□□□□ 0.35
CD48-203ENST00000613788 ACER1Q8TDN7 264 aa17.21■□□□□ 0.35
CD48-203ENST00000613788 OTUD5Q96G74 571 aa17.21■□□□□ 0.35
CD48-203ENST00000613788 HHIPL1Q96JK4 782 aa17.21■□□□□ 0.35
CD48-203ENST00000613788 KIAA1683Q9H0B3 1180 aa17.21■□□□□ 0.35
CD48-203ENST00000613788 GOPCQ9HD26 462 aa17.21■□□□□ 0.35
CD48-203ENST00000613788 GREB1LQ9C091 1923 aaPredicted RBP17.21■□□□□ 0.35
CD48-203ENST00000613788 CXCL11O14625 94 aa17.21■□□□□ 0.34
CD48-203ENST00000613788 ECE1P42892 770 aa17.21■□□□□ 0.34
CD48-203ENST00000613788 ZNF157P51786 506 aaPredicted RBP17.21■□□□□ 0.34
CD48-203ENST00000613788 BACE1P56817 501 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms