RNA–Protein interactions for RNA: ENST00000613023.1

RNVU1-19-201, Transcript of RNA, variant U1 small nuclear 19, humanhuman

BASIC

Gene RNVU1-19, Length 167 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-19-201ENST00000613023 USP48Q86UV5 1035 aa9.31□□□□□ -0.92
RNVU1-19-201ENST00000613023 CDAN1Q8IWY9 1227 aa9.31□□□□□ -0.92
RNVU1-19-201ENST00000613023 SCYL3Q8IZE3 742 aa9.31□□□□□ -0.92
RNVU1-19-201ENST00000613023 GMCL1P1Q8NEA9 526 aa9.31□□□□□ -0.92
RNVU1-19-201ENST00000613023 NKX2-3Q8TAU0 364 aa9.31□□□□□ -0.92
RNVU1-19-201ENST00000613023 CEP95Q96GE4 821 aa9.31□□□□□ -0.92
RNVU1-19-201ENST00000613023 WDR18Q9BV38 432 aa9.31□□□□□ -0.92
RNVU1-19-201ENST00000613023 SH2D4AQ9H788 454 aa9.31□□□□□ -0.92
RNVU1-19-201ENST00000613023 NMRK2Q9NPI5 230 aa9.31□□□□□ -0.92
RNVU1-19-201ENST00000613023 INCENPQ9NQS7 918 aa9.31□□□□□ -0.92
RNVU1-19-201ENST00000613023 ZBTB21Q9ULJ3 1066 aa9.31□□□□□ -0.92
RNVU1-19-201ENST00000613023 CCDC196A0A1B0GTZ2 297 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 CCDC69A6NI79 296 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 ADM5C9JUS6 153 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 DHX16O60231 1041 aaKnown RBP9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 PFKFB2O60825 505 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 USP2O75604 605 aaPredicted RBP9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 CD2BP2O95400 341 aaKnown RBP9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 ITGBL1O95965 494 aaPredicted RBP9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 SNHG28P0DPA3 235 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 CPA1P15085 419 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 SMARCA1P28370 1054 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 IREB2P48200 963 aaKnown RBP9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 FGD1P98174 961 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 TROAPQ12815 778 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 FAM47AQ5JRC9 791 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 SYNE3Q6ZMZ3 975 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 BRF1Q92994 677 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 TMX3Q96JJ7 454 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 LLPHQ9BRT6 129 aaKnown RBP9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 GPBP1L1Q9HC44 474 aaPredicted RBP9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 ARHGEF10LQ9HCE6 1279 aa9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 RBM28Q9NW13 759 aaKnown RBP9.3□□□□□ -0.92
RNVU1-19-201ENST00000613023 KIF3CO14782 793 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 ZBTB43O43298 467 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 GH2P01242 217 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 PDIA3P30101 505 aaKnown RBP9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 KIF5BP33176 963 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 MAP3K9P80192 1104 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 ICA1Q05084 483 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 RRP1BQ14684 758 aaKnown RBP9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 SLC4A8Q2Y0W8 1093 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 LDLRAD1Q5T700 205 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 ARMC9Q7Z3E5 817 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 CATIPQ7Z7H3 387 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 ANKRD13AQ8IZ07 590 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 ZNF654Q8IZM8 581 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 FAM177A1Q8N128 213 aaPredicted RBP9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 PNMA1Q8ND90 353 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 RBM46Q8TBY0 533 aaKnown RBP9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 GTF3C6Q969F1 213 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 GMCL1Q96IK5 515 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 WRNIP1Q96S55 665 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 TMEM47Q9BQJ4 181 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 LZTS2Q9BRK4 669 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 GLIS2Q9BZE0 524 aaPredicted RBP9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 KIAA1683Q9H0B3 1180 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 KAT14Q9H8E8 782 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 AS3MTQ9HBK9 375 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 TPCN1Q9ULQ1 816 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 HPS5Q9UPZ3 1129 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 TMX2Q9Y320 296 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 SLC12A7Q9Y666 1083 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 PASKQ96RG2 1323 aa9.29□□□□□ -0.92
RNVU1-19-201ENST00000613023 KLF18A0A0U1RQI7 1052 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 USP17L5A8MUK1 530 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 PLA2G6O60733 806 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 POTEIP0CG38 1075 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 POTEJP0CG39 1038 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 GNAQP50148 359 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 APOBRQ0VD83 1088 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 FSTL1Q12841 308 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 SEPT2Q15019 361 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 ME3Q16798 604 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 ASPRV1Q53RT3 343 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 GPATCH4Q5T3I0 446 aaKnown RBP9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 MIGA2Q7L4E1 593 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 CHST3Q7LGC8 479 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 SIAH1Q8IUQ4 282 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 STK11IPQ8N1F8 1099 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 SMC1BQ8NDV3 1235 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 DCAF4Q8WV16 495 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 LPAR1Q92633 364 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 C12orf42Q96LP6 360 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 TCEANC2Q96MN5 208 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 IPO9Q96P70 1041 aaKnown RBP9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 LRRC2Q9BYS8 371 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 SLKQ9H2G2 1235 aaPredicted RBP9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 PICK1Q9NRD5 415 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 RBM27Q9P2N5 1060 aaKnown RBP9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 BRPF3Q9ULD4 1205 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 CLEC11AQ9Y240 323 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 CSADQ9Y600 493 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 STK36Q9NRP7 1315 aa9.28□□□□□ -0.92
RNVU1-19-201ENST00000613023 RLFQ13129 1914 aa9.27□□□□□ -0.93
RNVU1-19-201ENST00000613023 PALM3A6NDB9 673 aaPredicted RBP9.27□□□□□ -0.93
RNVU1-19-201ENST00000613023 SPDYE5A6NIY4 337 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms