RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 GFAPP14136 432 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 IFI16Q16666 785 aaKnown RBP11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 TEKT1Q969V4 418 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 AGRPO00253 132 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 GSTA4O15217 222 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 DCTN3O75935 186 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ADCY5O95622 1261 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KRT19P08727 400 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PPP6R3Q5H9R7 873 aaPredicted RBP11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CCDC102BQ68D86 513 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 GIMAP6Q6P9H5 292 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 TEX11Q8IYF3 940 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 C18orf25Q96B23 403 aaPredicted RBP11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 TSR3Q9UJK0 312 aaKnown RBP11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 MAFFQ9ULX9 164 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 INPP5FQ9Y2H2 1132 aa11.96□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CCDC194A0A1B0GVG4 234 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ARHGAP42A6NI28 874 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PTK2BQ14289 1009 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 IQCB1Q15051 598 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 POMGNT2Q8NAT1 580 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ZCWPW1Q9H0M4 648 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 NONOQ15233 471 aaKnown RBP eCLIP11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 C7orf25Q9BPX7 421 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 FHDC1Q9C0D6 1143 aaPredicted RBP11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PPP6R1Q9UPN7 881 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 TRPC3Q13507 836 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 RILPL1Q5EBL4 403 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 TMTC2Q8N394 836 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 GABPB2Q8TAK5 448 aaPredicted RBP11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 OTUD7AQ8TE49 926 aaPredicted RBP11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 UBE2Q2Q8WVN8 375 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 THOC2Q8NI27 1593 aaKnown RBP11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 GPATCH8Q9UKJ3 1502 aaKnown RBP11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 C14orf93Q9H972 538 aaKnown RBP11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 A0A087WZG4 1122 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CNGA4Q8IV77 575 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 MGARPQ8TDB4 240 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CENPTQ96BT3 561 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ABCC11Q96J66 1382 aa11.95□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KIF2AO00139 706 aaPredicted RBP11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 DPYDQ12882 1025 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ADCK5Q3MIX3 580 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CCDC183Q5T5S1 534 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 TACO1Q9BSH4 297 aaKnown RBP11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 EIF2AQ9BY44 585 aaKnown RBP11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 LZTFL1Q9NQ48 299 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ANAPC5Q9UJX4 755 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 WHAMMP3Q1A5X7 153 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 NECAB1Q8N987 351 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 BCAS4Q8TDM0 211 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PPP4R1Q8TF05 950 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PCDHGA3Q9Y5H0 932 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CDC40O60508 579 aaKnown RBP eCLIP11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 S100BP04271 92 aaPredicted RBP11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 HPDP32754 393 aaPredicted RBP11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 RSBN1LQ6PCB5 846 aaPredicted RBP11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 NOSTRINQ8IVI9 506 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 RASEFQ8IZ41 740 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 GDAP1Q8TB36 358 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KRT23Q9C075 422 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 MRC2Q9UBG0 1479 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 FYB2Q5VWT5 728 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 DACH2Q96NX9 599 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 HDAC9Q9UKV0 1011 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 RALGAPBQ86X10 1494 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 N4BP1O75113 896 aaKnown RBP11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CNNM3Q8NE01 707 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 TTC14Q96N46 770 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 SLITRK6Q9H5Y7 841 aa11.94□□□□□ -0.5
CNTNAP3B-211ENST00000612828 HIP1O00291 1037 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PFDN1O60925 122 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PPP2R3AQ06190 1150 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 DCAF17Q5H9S7 520 aaPredicted RBP11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 SESTD1Q86VW0 696 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 POLR3EQ9NVU0 708 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 JARID2Q92833 1246 aaPredicted RBP11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PHACTR3Q96KR7 559 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 STX10O60499 249 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 GLRX3O76003 335 aaKnown RBP11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ARF3P61204 181 aaPredicted RBP11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ARF1P84077 181 aaKnown RBP11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CCDC93Q567U6 631 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ARFGAP2Q8N6H7 521 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 WDR60Q8WVS4 1066 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KIF1BPQ96EK5 621 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ZNF496Q96IT1 587 aaPredicted RBP11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 TCP11L1Q9NUJ3 509 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 FBXL5Q9UKA1 691 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 GOLGA4Q13439 2230 aaKnown RBP11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 BICRAQ9NZM4 1560 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PRAG1Q86YV5 1406 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CCHCR1Q8TD31 782 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 DNAJC8O75937 253 aaPredicted RBP11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 GJB2P29033 226 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CHST3Q7LGC8 479 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms