RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 OAS2P29728 719 aaKnown RBP15.97■□□□□ 0.15
COL6A1-207ENST00000612273 ATP6V1AP38606 617 aa15.97■□□□□ 0.15
COL6A1-207ENST00000612273 FXR1P51114 621 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL6A1-207ENST00000612273 PAGE5Q96GU1 130 aa15.97■□□□□ 0.15
COL6A1-207ENST00000612273 NUP88Q99567 741 aaPredicted RBP15.97■□□□□ 0.15
COL6A1-207ENST00000612273 FOXP1Q9H334 677 aaPredicted RBP15.97■□□□□ 0.15
COL6A1-207ENST00000612273 DACH1Q9UI36 760 aa15.97■□□□□ 0.15
COL6A1-207ENST00000612273 EFCAB8A8MWE9 144 aa15.97■□□□□ 0.15
COL6A1-207ENST00000612273 ZNF18P17022 549 aa15.97■□□□□ 0.15
COL6A1-207ENST00000612273 FGFR2P21802 821 aa15.97■□□□□ 0.15
COL6A1-207ENST00000612273 KCPQ6ZWJ8 1503 aa15.97■□□□□ 0.15
COL6A1-207ENST00000612273 NLRP5P59047 1200 aa15.97■□□□□ 0.15
COL6A1-207ENST00000612273 SLF1Q9BQI6 1058 aa15.97■□□□□ 0.15
COL6A1-207ENST00000612273 TFCP2L1Q9NZI6 479 aa15.97■□□□□ 0.15
COL6A1-207ENST00000612273 EXOC5O00471 708 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 XBP1P17861 261 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 KRT2P35908 639 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 PLCD1P51178 756 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 CATIPQ7Z7H3 387 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 GDAP1L1Q96MZ0 367 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 ARFGAP3Q9NP61 516 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 KCND1Q9NSA2 647 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 AATFQ9NY61 560 aaKnown RBP eCLIP15.96■□□□□ 0.15
COL6A1-207ENST00000612273 ABCC12Q96J65 1359 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 MROH5Q6ZUA9 1318 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 RNF225M0QZC1 329 aaPredicted RBP15.96■□□□□ 0.15
COL6A1-207ENST00000612273 ADAMTS2O95450 1211 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 CYP2D6P10635 497 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 GPKOWQ92917 476 aaPredicted RBP eCLIP15.96■□□□□ 0.15
COL6A1-207ENST00000612273 CEP131Q9UPN4 1083 aa15.96■□□□□ 0.15
COL6A1-207ENST00000612273 CDHR2Q9BYE9 1310 aa15.96■□□□□ 0.14
COL6A1-207ENST00000612273 NR1I3Q14994 352 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 STAG1Q8WVM7 1258 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 TRIM10Q9UDY6 481 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 MYO5AQ9Y4I1 1855 aaKnown RBP15.95■□□□□ 0.14
COL6A1-207ENST00000612273 PP2D1A8MPX8 630 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 TBX2Q13207 712 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-207ENST00000612273 CUL4BQ13620 913 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 SMC1AQ14683 1233 aaKnown RBP15.95■□□□□ 0.14
COL6A1-207ENST00000612273 CC2D1AQ6P1N0 951 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-207ENST00000612273 RNF41Q9H4P4 317 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-207ENST00000612273 GDAQ9Y2T3 454 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 COL5A2P05997 1499 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-207ENST00000612273 ENC1O14682 589 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 KIF5CO60282 957 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 TBC1D8O95759 1140 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 KLRK1P26718 216 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 MAP3K9P80192 1104 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 PKN1Q16512 942 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 ZSCAN10Q96SZ4 725 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-207ENST00000612273 MRFAP1Q9Y605 127 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 ADAMTS7Q9UKP4 1686 aa15.95■□□□□ 0.14
COL6A1-207ENST00000612273 TRIM49BA6NDI0 452 aa15.94■□□□□ 0.14
COL6A1-207ENST00000612273 SARSP49591 514 aaKnown RBP15.94■□□□□ 0.14
COL6A1-207ENST00000612273 FILIP1LQ4L180 1135 aa15.94■□□□□ 0.14
COL6A1-207ENST00000612273 TTC38Q5R3I4 469 aa15.94■□□□□ 0.14
COL6A1-207ENST00000612273 IQCA1Q86XH1 822 aa15.94■□□□□ 0.14
COL6A1-207ENST00000612273 SLC35F6Q8N357 371 aa15.94■□□□□ 0.14
COL6A1-207ENST00000612273 GUCA1BQ9UMX6 200 aa15.94■□□□□ 0.14
COL6A1-207ENST00000612273 CHMP4BP1P59074 171 aa15.94■□□□□ 0.14
COL6A1-207ENST00000612273 ALX1Q15699 326 aa15.94■□□□□ 0.14
COL6A1-207ENST00000612273 C3orf67Q6ZVT6 689 aa15.94■□□□□ 0.14
COL6A1-207ENST00000612273 CPVLQ9H3G5 476 aa15.94■□□□□ 0.14
COL6A1-207ENST00000612273 ADGRG1Q9Y653 693 aa15.94■□□□□ 0.14
COL6A1-207ENST00000612273 ZNF335Q9H4Z2 1342 aaPredicted RBP15.94■□□□□ 0.14
COL6A1-207ENST00000612273 KCNJ6P48051 423 aa15.93■□□□□ 0.14
COL6A1-207ENST00000612273 HNRNPH2P55795 449 aaKnown RBP15.93■□□□□ 0.14
COL6A1-207ENST00000612273 CCDC152Q4G0S7 254 aa15.93■□□□□ 0.14
COL6A1-207ENST00000612273 FAM237AA0A1B0GTK4 181 aa15.93■□□□□ 0.14
COL6A1-207ENST00000612273 ZRANB2O95218 330 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL6A1-207ENST00000612273 LMAN1P49257 510 aa15.93■□□□□ 0.14
COL6A1-207ENST00000612273 SPATA1Q5VX52 437 aa15.93■□□□□ 0.14
COL6A1-207ENST00000612273 SLC51AQ86UW1 340 aa15.93■□□□□ 0.14
COL6A1-207ENST00000612273 KIFC2Q96AC6 838 aa15.93■□□□□ 0.14
COL6A1-207ENST00000612273 CRKLP46109 303 aaKnown RBP15.93■□□□□ 0.14
COL6A1-207ENST00000612273 TICAM2Q86XR7 235 aa15.93■□□□□ 0.14
COL6A1-207ENST00000612273 GOLGA1Q92805 767 aa15.93■□□□□ 0.14
COL6A1-207ENST00000612273 SRRTQ9BXP5 876 aaKnown RBP15.93■□□□□ 0.14
COL6A1-207ENST00000612273 BRMS1Q9HCU9 246 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 STK36Q9NRP7 1315 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 A0A1B0GTH6 734 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 GYPCP04921 128 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 NCAPH2Q6IBW4 605 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 ZNF34Q8IZ26 560 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 TMTC2Q8N394 836 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 ZNF512BQ96KM6 892 aaPredicted RBP15.92■□□□□ 0.14
COL6A1-207ENST00000612273 CHP1Q99653 195 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 TJP1Q07157 1748 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 CCDC66A2RUB6 948 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 KRT9P35527 623 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 KRT31Q15323 416 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 LONRF2Q1L5Z9 754 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 KANK3Q6NY19 840 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 SRBD1Q8N5C6 995 aaKnown RBP15.92■□□□□ 0.14
COL6A1-207ENST00000612273 CTCFLQ8NI51 663 aaPredicted RBP15.92■□□□□ 0.14
COL6A1-207ENST00000612273 CAPZA3Q96KX2 299 aa15.92■□□□□ 0.14
COL6A1-207ENST00000612273 ADD3Q9UEY8 706 aaKnown RBP15.92■□□□□ 0.14
COL6A1-207ENST00000612273 MYH15Q9Y2K3 1946 aa15.91■□□□□ 0.14
COL6A1-207ENST00000612273 TSPY2A6NKD2 308 aa15.91■□□□□ 0.14
COL6A1-207ENST00000612273 N4BP1O75113 896 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms