RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 C11orf49Q9H6J7 331 aa10.05□□□□□ -0.8
ZNF248-208ENST00000611278 RPTORQ8N122 1335 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 GPR75-ASB3A0A0A6YYF3 556 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 TBC1D12O60347 775 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 CAP2P40123 477 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 RASGRF1Q13972 1273 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 RRP12Q5JTH9 1297 aaKnown RBP10.04□□□□□ -0.8
ZNF248-208ENST00000611278 CUL5Q93034 780 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.04□□□□□ -0.8
ZNF248-208ENST00000611278 ECHDC1Q9NTX5 307 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 ZHX1Q9UKY1 873 aaPredicted RBP10.04□□□□□ -0.8
ZNF248-208ENST00000611278 COL4A1P02462 1669 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 GTPBP6O43824 516 aaPredicted RBP10.04□□□□□ -0.8
ZNF248-208ENST00000611278 INHAP05111 366 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 BACE1P56817 501 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 BECN1Q14457 450 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 PCSK9Q8NBP7 692 aaKnown RBP10.04□□□□□ -0.8
ZNF248-208ENST00000611278 RHPN1Q8TCX5 695 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 NUP133Q8WUM0 1156 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 ZNF333Q96JL9 665 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 IL1RAPL2Q9NP60 686 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 SLC15A5A6NIM6 579 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 SNAP23O00161 211 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 IGF2BP3O00425 579 aaKnown RBP eCLIP10.04□□□□□ -0.8
ZNF248-208ENST00000611278 AKAP17AQ02040 695 aaKnown RBP10.04□□□□□ -0.8
ZNF248-208ENST00000611278 MTMR2Q13614 643 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 FAM163AQ96GL9 167 aaPredicted RBP10.04□□□□□ -0.8
ZNF248-208ENST00000611278 GLT1D1Q96MS3 346 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 UBAC1Q9BSL1 405 aa10.04□□□□□ -0.8
ZNF248-208ENST00000611278 GH2P01242 217 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 NT5C2P49902 561 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 FXR1P51114 621 aaKnown RBP eCLIP10.03□□□□□ -0.8
ZNF248-208ENST00000611278 U2AF1L4Q8WU68 220 aaKnown RBP10.03□□□□□ -0.8
ZNF248-208ENST00000611278 BACH2Q9BYV9 841 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 BOLA2Q9H3K6 86 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 R3HDMLQ9H3Y0 253 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 PAG1Q9NWQ8 432 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 EXOC6BQ9Y2D4 811 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 PTPRAP18433 802 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
ZNF248-208ENST00000611278 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.03□□□□□ -0.8
ZNF248-208ENST00000611278 FAM160B2Q86V87 743 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 C7orf61Q8IZ16 206 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 GAS2L1Q99501 681 aaPredicted RBP10.03□□□□□ -0.8
ZNF248-208ENST00000611278 MMP19Q99542 508 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 HMG20BQ9P0W2 317 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 UTYO14607 1347 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 ZNF646O15015 1829 aaPredicted RBP10.03□□□□□ -0.8
ZNF248-208ENST00000611278 GDF11O95390 407 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 RAG1P15918 1043 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 KLRK1P26718 216 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 EPHA10Q5JZY3 1008 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 CERS5Q8N5B7 392 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 SH3TC2Q8TF17 1288 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 ANP32BQ92688 251 aaKnown RBP10.03□□□□□ -0.8
ZNF248-208ENST00000611278 ZBTB21Q9ULJ3 1066 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 POTEB2H3BUK9 544 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 ANKRD44Q8N8A2 993 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 SEZ6LQ9BYH1 1024 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 MSRAQ9UJ68 235 aa10.03□□□□□ -0.8
ZNF248-208ENST00000611278 TRIM27P14373 513 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 DBNDD2Q9BQY9 259 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 NAP1L2Q9ULW6 460 aaPredicted RBP10.02□□□□□ -0.81
ZNF248-208ENST00000611278 ASB14A6NK59 587 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 RANBP6O60518 1105 aaKnown RBP10.02□□□□□ -0.81
ZNF248-208ENST00000611278 CHMP4BP1P59074 171 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 HERVK_113P62684 666 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 SLC17A8Q8NDX2 589 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 RNF216Q9NWF9 866 aaPredicted RBP10.02□□□□□ -0.81
ZNF248-208ENST00000611278 STX8Q9UNK0 236 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 ATP11BQ9Y2G3 1177 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 MROH7Q68CQ1 1323 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 WDR46O15213 610 aaKnown RBP10.02□□□□□ -0.81
ZNF248-208ENST00000611278 RRP1P56182 461 aaKnown RBP10.02□□□□□ -0.81
ZNF248-208ENST00000611278 RILPL2Q969X0 211 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 CDCA7LQ96GN5 454 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 WDR18Q9BV38 432 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 FAM184BQ9ULE4 1060 aa10.02□□□□□ -0.81
ZNF248-208ENST00000611278 EN2P19622 333 aaPredicted RBP10.01□□□□□ -0.81
ZNF248-208ENST00000611278 IRF5Q13568 498 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 ZNF697Q5TEC3 545 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 APOBEC3HQ6NTF7 200 aaKnown RBP10.01□□□□□ -0.81
ZNF248-208ENST00000611278 PPP2R3CQ969Q6 453 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 CHMP4CQ96CF2 233 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 GZF1Q9H116 711 aaPredicted RBP10.01□□□□□ -0.81
ZNF248-208ENST00000611278 SNCAIPQ9Y6H5 919 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 SPEF2Q9C093 1822 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 GOLGA6L3A6NEY3 463 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 MBD4O95243 580 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 SGPL1O95470 568 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 ZAP70P43403 619 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 BMS1Q14692 1282 aaKnown RBP10.01□□□□□ -0.81
ZNF248-208ENST00000611278 SLC1A4P43007 532 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 TKFCQ3LXA3 575 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 CPLX2Q6PUV4 134 aaKnown RBP10.01□□□□□ -0.81
ZNF248-208ENST00000611278 ASCC2Q9H1I8 757 aaPredicted RBP10.01□□□□□ -0.81
ZNF248-208ENST00000611278 C1orf115Q9H7X2 142 aa10.01□□□□□ -0.81
ZNF248-208ENST00000611278 FAM47CQ5HY64 1035 aa10□□□□□ -0.81
ZNF248-208ENST00000611278 ANKRD45Q5TZF3 282 aa10□□□□□ -0.81
ZNF248-208ENST00000611278 SKAP1Q86WV1 359 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms