RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 TNKSO95271 1327 aa23.17■■□□□ 1.3
SSBP3-216ENST00000610401 TMEM94Q12767 1356 aa23.17■■□□□ 1.3
SSBP3-216ENST00000610401 TCRBV5S4A2TA0A5A2 114 aa23.17■■□□□ 1.3
SSBP3-216ENST00000610401 CSF1RP07333 972 aa23.17■■□□□ 1.3
SSBP3-216ENST00000610401 ZSCAN26Q16670 478 aa23.17■■□□□ 1.3
SSBP3-216ENST00000610401 TXLNAP40222 546 aa23.17■■□□□ 1.3
SSBP3-216ENST00000610401 PLCD1P51178 756 aa23.17■■□□□ 1.3
SSBP3-216ENST00000610401 DYNLL1P63167 89 aaKnown RBP23.17■■□□□ 1.3
SSBP3-216ENST00000610401 SMIM5Q71RC9 77 aa23.17■■□□□ 1.3
SSBP3-216ENST00000610401 PAGE5Q96GU1 130 aa23.17■■□□□ 1.3
SSBP3-216ENST00000610401 FAM47AQ5JRC9 791 aa23.16■■□□□ 1.3
SSBP3-216ENST00000610401 GIGYF2Q6Y7W6 1299 aaKnown RBP23.16■■□□□ 1.3
SSBP3-216ENST00000610401 RASGRP4Q8TDF6 673 aa23.16■■□□□ 1.3
SSBP3-216ENST00000610401 CHP1Q99653 195 aa23.16■■□□□ 1.3
SSBP3-216ENST00000610401 DACH1Q9UI36 760 aa23.16■■□□□ 1.3
SSBP3-216ENST00000610401 KCNJ6P48051 423 aa23.16■■□□□ 1.3
SSBP3-216ENST00000610401 HSPA2P54652 639 aa23.16■■□□□ 1.3
SSBP3-216ENST00000610401 PIK3AP1Q6ZUJ8 805 aa23.16■■□□□ 1.3
SSBP3-216ENST00000610401 NOA1Q8NC60 698 aaKnown RBP23.16■■□□□ 1.3
SSBP3-216ENST00000610401 NACAP1Q9BZK3 213 aa23.16■■□□□ 1.3
SSBP3-216ENST00000610401 TRIM49BA6NDI0 452 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 TNNT3P45378 269 aaPredicted RBP23.15■■□□□ 1.3
SSBP3-216ENST00000610401 GYG1P46976 350 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 FOXR1Q6PIV2 292 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 RIC1Q4ADV7 1423 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 FER1L4A9Z1Z3 1794 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 DEXIO95424 95 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 GSPT2Q8IYD1 628 aaKnown RBP23.15■■□□□ 1.3
SSBP3-216ENST00000610401 CCDC24Q8N4L8 307 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 FAN1Q9Y2M0 1017 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 GDAQ9Y2T3 454 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 ERVV-2B6SEH9 535 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 VSNL1P62760 191 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 PTGDRQ13258 359 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 SGMS1Q86VZ5 419 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 WASF1Q92558 559 aa23.15■■□□□ 1.3
SSBP3-216ENST00000610401 SRPRBQ9Y5M8 271 aaKnown RBP23.15■■□□□ 1.3
SSBP3-216ENST00000610401 GYPCP04921 128 aa23.14■■□□□ 1.3
SSBP3-216ENST00000610401 CUL4BQ13620 913 aa23.14■■□□□ 1.3
SSBP3-216ENST00000610401 PUM3Q15397 648 aaKnown RBP23.14■■□□□ 1.3
SSBP3-216ENST00000610401 FILIP1LQ4L180 1135 aa23.14■■□□□ 1.3
SSBP3-216ENST00000610401 RSRC2Q7L4I2 434 aaKnown RBP23.14■■□□□ 1.3
SSBP3-216ENST00000610401 DZIP3Q86Y13 1208 aaKnown RBP23.14■■□□□ 1.3
SSBP3-216ENST00000610401 MYH15Q9Y2K3 1946 aa23.14■■□□□ 1.3
SSBP3-216ENST00000610401 GPS2Q13227 327 aa23.14■■□□□ 1.29
SSBP3-216ENST00000610401 ANKZF1Q9H8Y5 726 aa23.14■■□□□ 1.29
SSBP3-216ENST00000610401 MAP3K15Q6ZN16 1313 aa23.14■■□□□ 1.29
SSBP3-216ENST00000610401 SOS2Q07890 1332 aaPredicted RBP23.13■■□□□ 1.29
SSBP3-216ENST00000610401 CTAGE9A4FU28 777 aa23.13■■□□□ 1.29
SSBP3-216ENST00000610401 RABGGTAQ92696 567 aa23.13■■□□□ 1.29
SSBP3-216ENST00000610401 KRT23Q9C075 422 aa23.13■■□□□ 1.29
SSBP3-216ENST00000610401 SLC5A1P13866 664 aa23.13■■□□□ 1.29
SSBP3-216ENST00000610401 KRT9P35527 623 aa23.13■■□□□ 1.29
SSBP3-216ENST00000610401 SRGAP1Q7Z6B7 1085 aa23.13■■□□□ 1.29
SSBP3-216ENST00000610401 RIN2Q8WYP3 895 aaPredicted RBP23.13■■□□□ 1.29
SSBP3-216ENST00000610401 LPIN2Q92539 896 aa23.13■■□□□ 1.29
SSBP3-216ENST00000610401 DRC1Q96MC2 740 aa23.13■■□□□ 1.29
SSBP3-216ENST00000610401 PP2D1A8MPX8 630 aa23.12■■□□□ 1.29
SSBP3-216ENST00000610401 TPM1P09493 284 aa23.12■■□□□ 1.29
SSBP3-216ENST00000610401 LIFRP42702 1097 aa23.12■■□□□ 1.29
SSBP3-216ENST00000610401 PPARAQ07869 468 aa23.12■■□□□ 1.29
SSBP3-216ENST00000610401 VGLL2Q8N8G2 317 aa23.12■■□□□ 1.29
SSBP3-216ENST00000610401 PSMB7Q99436 277 aa23.12■■□□□ 1.29
SSBP3-216ENST00000610401 SLIT3O75094 1523 aa23.12■■□□□ 1.29
SSBP3-216ENST00000610401 A0A1B0GTH6 734 aa23.12■■□□□ 1.29
SSBP3-216ENST00000610401 SARSP49591 514 aaKnown RBP23.12■■□□□ 1.29
SSBP3-216ENST00000610401 ERVK-24P63145 666 aa23.12■■□□□ 1.29
SSBP3-216ENST00000610401 UBXN1Q04323 297 aa23.12■■□□□ 1.29
SSBP3-216ENST00000610401 BICDL1Q6ZP65 573 aa23.12■■□□□ 1.29
SSBP3-216ENST00000610401 KRT31Q15323 416 aa23.11■■□□□ 1.29
SSBP3-216ENST00000610401 IFIT1BQ5T764 474 aaKnown RBP23.11■■□□□ 1.29
SSBP3-216ENST00000610401 SPATA1Q5VX52 437 aa23.11■■□□□ 1.29
SSBP3-216ENST00000610401 PCMTD1Q96MG8 357 aaPredicted RBP23.11■■□□□ 1.29
SSBP3-216ENST00000610401 SLC4A9Q96Q91 983 aa23.11■■□□□ 1.29
SSBP3-216ENST00000610401 GOLGA6L9A6NEM1 432 aa23.11■■□□□ 1.29
SSBP3-216ENST00000610401 MFAP3LO75121 409 aa23.11■■□□□ 1.29
SSBP3-216ENST00000610401 FOXP1Q9H334 677 aaPredicted RBP23.11■■□□□ 1.29
SSBP3-216ENST00000610401 ADD3Q9UEY8 706 aaKnown RBP23.11■■□□□ 1.29
SSBP3-216ENST00000610401 SIPA1L3O60292 1781 aaPredicted RBP23.11■■□□□ 1.29
SSBP3-216ENST00000610401 KCNQ4P56696 695 aa23.1■■□□□ 1.29
SSBP3-216ENST00000610401 KCTD19Q17RG1 926 aaPredicted RBP23.1■■□□□ 1.29
SSBP3-216ENST00000610401 ACSBG1Q96GR2 724 aa23.1■■□□□ 1.29
SSBP3-216ENST00000610401 WDR17Q8IZU2 1322 aa23.1■■□□□ 1.29
SSBP3-216ENST00000610401 KRT2P35908 639 aa23.1■■□□□ 1.29
SSBP3-216ENST00000610401 GPKOWQ92917 476 aaPredicted RBP eCLIP23.1■■□□□ 1.291e-8■■□□□ 12.3
SSBP3-216ENST00000610401 CDC23Q9UJX2 597 aa23.1■■□□□ 1.29
SSBP3-216ENST00000610401 TUBB4AP04350 444 aa23.09■■□□□ 1.29
SSBP3-216ENST00000610401 NLRP5P59047 1200 aa23.09■■□□□ 1.29
SSBP3-216ENST00000610401 FCHSD1Q86WN1 690 aa23.09■■□□□ 1.29
SSBP3-216ENST00000610401 CNNM2Q9H8M5 875 aa23.09■■□□□ 1.29
SSBP3-216ENST00000610401 CEP131Q9UPN4 1083 aa23.09■■□□□ 1.29
SSBP3-216ENST00000610401 SCN11AQ9UI33 1791 aa23.09■■□□□ 1.29
SSBP3-216ENST00000610401 MYO5AQ9Y4I1 1855 aaKnown RBP23.09■■□□□ 1.29
SSBP3-216ENST00000610401 PDE8AO60658 829 aa23.09■■□□□ 1.29
SSBP3-216ENST00000610401 UQCRFS1P1P0C7P4 283 aa23.09■■□□□ 1.29
SSBP3-216ENST00000610401 ENAHQ8N8S7 591 aaPredicted RBP23.09■■□□□ 1.29
SSBP3-216ENST00000610401 MATR3P43243 847 aaKnown RBP eCLIP23.09■■□□□ 1.293e-6■■■□□ 14.6
SSBP3-216ENST00000610401 DNA2P51530 1060 aa23.09■■□□□ 1.29
SSBP3-216ENST00000610401 SUSD4Q5VX71 490 aa23.08■■□□□ 1.29
SSBP3-216ENST00000610401 APTXQ7Z2E3 356 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms