RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
CTCFL-220ENST00000608858 GDF11O95390 407 aa11.57□□□□□ -0.56
CTCFL-220ENST00000608858 LRRC41Q15345 812 aa11.57□□□□□ -0.56
CTCFL-220ENST00000608858 C16orf59Q7L2K0 433 aa11.57□□□□□ -0.56
CTCFL-220ENST00000608858 DPP9Q86TI2 863 aa11.57□□□□□ -0.56
CTCFL-220ENST00000608858 WDR18Q9BV38 432 aa11.57□□□□□ -0.56
CTCFL-220ENST00000608858 TSPYL2Q9H2G4 693 aaPredicted RBP11.57□□□□□ -0.56
CTCFL-220ENST00000608858 NKX2-4Q9H2Z4 354 aa11.57□□□□□ -0.56
CTCFL-220ENST00000608858 GNL3LQ9NVN8 582 aaKnown RBP11.57□□□□□ -0.56
CTCFL-220ENST00000608858 ARIH1Q9Y4X5 557 aaPredicted RBP11.57□□□□□ -0.56
CTCFL-220ENST00000608858 USP17L10C9JJH3 530 aa11.56□□□□□ -0.56
CTCFL-220ENST00000608858 CYBAP13498 195 aa11.56□□□□□ -0.56
CTCFL-220ENST00000608858 MRE11P49959 708 aa11.56□□□□□ -0.56
CTCFL-220ENST00000608858 RHBDL3P58872 404 aa11.56□□□□□ -0.56
CTCFL-220ENST00000608858 EXOSC9Q06265 439 aaKnown RBP11.56□□□□□ -0.56
CTCFL-220ENST00000608858 SNX17Q15036 470 aa11.56□□□□□ -0.56
CTCFL-220ENST00000608858 SIL1Q9H173 461 aa11.56□□□□□ -0.56
CTCFL-220ENST00000608858 BTBD7Q9P203 1132 aa11.56□□□□□ -0.56
CTCFL-220ENST00000608858 DENND2AQ9ULE3 1009 aa11.56□□□□□ -0.56
CTCFL-220ENST00000608858 MYH13Q9UKX3 1938 aa11.56□□□□□ -0.56
CTCFL-220ENST00000608858 GAKO14976 1311 aa11.56□□□□□ -0.56
CTCFL-220ENST00000608858 REV3LO60673 3130 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 MUC6Q6W4X9 2439 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 LOC285556D6RIA3 1793 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 C19orf81C9J6K1 198 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 RFXAPO00287 272 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 KIAA0355O15063 1070 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 ALDH1L1O75891 902 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 ADORA1P30542 326 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 MECOMQ03112 1051 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 DDX10Q13206 875 aaKnown RBP11.55□□□□□ -0.56
CTCFL-220ENST00000608858 FAM47AQ5JRC9 791 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 SLC44A5Q8NCS7 719 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 UIMC1Q96RL1 719 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 TBC1D2Q9BYX2 928 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 C11orf16Q9NQ32 467 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 CXXC1Q9P0U4 656 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-220ENST00000608858 IVNS1ABPQ9Y6Y0 642 aa11.55□□□□□ -0.56
CTCFL-220ENST00000608858 GPR75-ASB3A0A0A6YYF3 556 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 EYA2O00167 538 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 PGK1P00558 417 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 TIMM10P62072 90 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 FAAP100Q0VG06 881 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 ATP2B3Q16720 1220 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 RABL6Q3YEC7 729 aaPredicted RBP11.54□□□□□ -0.56
CTCFL-220ENST00000608858 TMEM240Q5SV17 173 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 TBC1D9Q6ZT07 1266 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 ZNF365Q70YC5 407 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 ATG9AQ7Z3C6 839 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 ZNF384Q8TF68 577 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 MSRAQ9UJ68 235 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 RABGAP1Q9Y3P9 1069 aa11.54□□□□□ -0.56
CTCFL-220ENST00000608858 CHD9Q3L8U1 2897 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 SMIM22K7EJ46 135 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 SEPT4O43236 478 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 COBLO75128 1261 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 MYOGP15173 224 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 CSF2RAP15509 400 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 RABGGTBP53611 331 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 CCNA1P78396 465 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 SLF2Q8IX21 1173 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 FAM163AQ96GL9 167 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-220ENST00000608858 SLC28A3Q9HAS3 691 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 YBX2Q9Y2T7 364 aaKnown RBP11.53□□□□□ -0.56
CTCFL-220ENST00000608858 FARP1Q9Y4F1 1045 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-220ENST00000608858 SMCHD1A6NHR9 2005 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 PIEZO1Q92508 2521 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 MROH7-TTC4A0A0A0MT08 1334 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 KIF16BQ96L93 1317 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 SALL1Q9NSC2 1324 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 ATAD5Q96QE3 1844 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 RFX7Q2KHR2 1363 aa11.53□□□□□ -0.56
CTCFL-220ENST00000608858 DCDC2CA8MYV0 355 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 USP17L15C9J2P7 530 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 USP17L13C9JLJ4 530 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 USP17L11C9JVI0 530 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 USP17L18D6R9N7 530 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 USP17L22D6RA61 530 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 USP17L17D6RBQ6 530 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 USP17L19D6RCP7 530 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 USP17L20D6RJB6 530 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 GPR37L1O60883 481 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 TIMP1P01033 207 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 ASNSP08243 561 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 HOXC6P09630 235 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 ADORA2AP29274 412 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 USP17L24Q0WX57 530 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 GRB14Q14449 540 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 C1orf53Q5VUE5 145 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 CCDC102BQ68D86 513 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 KRT40Q6A162 431 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 USP17L2Q6R6M4 530 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 ERICH6Q7L0X2 663 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 TEX11Q8IYF3 940 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 SH3RF3Q8TEJ3 882 aaPredicted RBP11.52□□□□□ -0.57
CTCFL-220ENST00000608858 CERS4Q9HA82 394 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 XPNPEP3Q9NQH7 507 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 CEP126Q9P2H0 1117 aa11.52□□□□□ -0.57
CTCFL-220ENST00000608858 PI4KBQ9UBF8 816 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms